Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03908
Gene name
Locationscaffold_04:331876..333749
Strand-
Gene length (bp)1873
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 5.6E-03 34 78
PF01476 LysM LysM domain 3.7E-05 97 131

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1723 0.0815 0.8223 0.0787 0.0525 0.0439 0.3475 0.3158 0.1622 0.0037

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999672

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup229
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4895
Ophiocordyceps camponoti-floridani Ophcf2|01392
Ophiocordyceps camponoti-floridani Ophcf2|02584
Ophiocordyceps camponoti-floridani Ophcf2|03908 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4148
Ophiocordyceps camponoti-rufipedis Ophun1|6485
Ophiocordyceps kimflemingae Ophio5|2669
Ophiocordyceps kimflemingae Ophio5|5651
Ophiocordyceps kimflemingae Ophio5|5719
Ophiocordyceps subramaniannii Hirsu2|3699
Ophiocordyceps subramaniannii Hirsu2|6751

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03908
MASPLRRLLLLLGGYSVFAAAVPPMPTTETLCYYVVEGGDDCNLIATSHDLTVREFLEMNSELGSNCSISINDSV
IVPCFKPKKPTPETDRPCTSIYLVTEGDTCHSIAISQGVSPRNLIAWNLIDDDCNLRGYLKFSTSRNTSTPNINI
SQELKSRLRLICSRYVGNYTKSEPIPDSVLLPSDSQMEKMIMEAAKVKSEGLQVYGGNTVEAVASASGPKNIVLN
QLFKLMISDSVDIRSSSCDTGSCSLQVSSSATADIEAPAAVGSKLELPQSDGPATASDKAEKAYESQNEGLLEEG
SC*
Coding >Ophcf2|03908
ATGGCCTCTCCTCTAAGACGTCTCCTCCTCCTCCTCGGAGGCTACTCAGTCTTCGCCGCCGCCGTGCCTCCAATG
CCCACAACCGAAACGCTATGCTATTACGTGGTCGAGGGCGGAGATGACTGCAATCTCATCGCAACAAGCCACGAC
TTGACCGTCCGAGAGTTCCTCGAAATGAACTCTGAGCTCGGCAGCAACTGCAGTATCTCCATCAACGACAGCGTC
ATCGTTCCCTGCTTCAAGCCAAAGAAGCCCACGCCCGAGACGGACCGCCCTTGCACCAGCATTTACCTTGTTACT
GAGGGAGACACGTGCCACTCCATCGCCATCTCCCAGGGGGTTTCGCCTCGGAACCTCATTGCTTGGAACCTGATT
GATGACGATTGCAATCTCAGGGGATACTTGAAGTTCTCCACGTCCCGCAACACATCCACCCCGAATATCAACATC
TCGCAAGAGCTCAAGTCCCGCCTCAGGCTGATCTGCAGCCGCTACGTCGGCAACTACACCAAGTCAGAGCCCATC
CCGGACTCGGTCCTCTTGCCGTCCGACTCTCAGATGGAGAAAATGATCATGGAGGCGGCCAAGGTCAAGTCTGAG
GGTCTTCAGGTCTATGGTGGCAATACGGTGGAGGCTGTTGCCTCTGCGTCTGGTCCCAAGAACATCGTTTTGAAC
CAGCTGTTCAAACTCATGATTTCCGACTCGGTTGACATCCGGAGCAGCAGCTGTGATACCGGCTCTTGCTCCCTT
CAAGTCTCCTCCAGCGCCACCGCCGACATCGAAGCTCCGGCTGCGGTGGGCTCCAAGCTGGAGTTGCCGCAGAGT
GACGGCCCTGCAACAGCTTCTGACAAAGCCGAGAAGGCTTATGAGAGTCAGAACGAGGGTCTCCTTGAGGAGGGA
AGCTGTTAG
Transcript >Ophcf2|03908
ATGGCCTCTCCTCTAAGACGTCTCCTCCTCCTCCTCGGAGGCTACTCAGTCTTCGCCGCCGCCGTGCCTCCAATG
CCCACAACCGAAACGCTATGCTATTACGTGGTCGAGGGCGGAGATGACTGCAATCTCATCGCAACAAGCCACGAC
TTGACCGTCCGAGAGTTCCTCGAAATGAACTCTGAGCTCGGCAGCAACTGCAGTATCTCCATCAACGACAGCGTC
ATCGTTCCCTGCTTCAAGCCAAAGAAGCCCACGCCCGAGACGGACCGCCCTTGCACCAGCATTTACCTTGTTACT
GAGGGAGACACGTGCCACTCCATCGCCATCTCCCAGGGGGTTTCGCCTCGGAACCTCATTGCTTGGAACCTGATT
GATGACGATTGCAATCTCAGGGGATACTTGAAGTTCTCCACGTCCCGCAACACATCCACCCCGAATATCAACATC
TCGCAAGAGCTCAAGTCCCGCCTCAGGCTGATCTGCAGCCGCTACGTCGGCAACTACACCAAGTCAGAGCCCATC
CCGGACTCGGTCCTCTTGCCGTCCGACTCTCAGATGGAGAAAATGATCATGGAGGCGGCCAAGGTCAAGTCTGAG
GGTCTTCAGGTCTATGGTGGCAATACGGTGGAGGCTGTTGCCTCTGCGTCTGGTCCCAAGAACATCGTTTTGAAC
CAGCTGTTCAAACTCATGATTTCCGACTCGGTTGACATCCGGAGCAGCAGCTGTGATACCGGCTCTTGCTCCCTT
CAAGTCTCCTCCAGCGCCACCGCCGACATCGAAGCTCCGGCTGCGGTGGGCTCCAAGCTGGAGTTGCCGCAGAGT
GACGGCCCTGCAACAGCTTCTGACAAAGCCGAGAAGGCTTATGAGAGTCAGAACGAGGGTCTCCTTGAGGAGGGA
AGCTGTTAG
Gene >Ophcf2|03908
ATGGCCTCTCCTCTAAGACGTCTCCTCCTCCTCCTCGGAGGCTACTCAGTCTTCGCCGCCGCCGTGCCTCCAATG
CCCACAACCGAAACGCTATGCTATTACGTGGTCGAGGGCGGAGATGACTGCAATCTCATCGCAACAAGCCACGAC
TTGACCGTCCGAGAGTTCCTCGAAATGAACTCTGAGCTCGGCAGCAACTGCAGTATCTCCATCAACGACAGCGTC
ATCGTTCCCTGCTTCAAGCCAAAGAAGCCCACGCCCGAGACGGACCGCCCTTGCACCAGCATTTACCTTGTTACT
GAGGGAGACACGTGCCACTCCATCGCCATCTCCCAGGGGGTTTCGCCTCGGAACCTCATTGCTTGGAACCTGATT
GATGACGATTGCAATCTCAGGGGATACTTGAAGTTGTGCGTCTCTCGCTATGAGGAGCCTGCCCAATGCAGCAAG
TATCACCGCGTCGAGCAGGGGGATACGTGCTATAATATTGCGCAGAAGAATGGCATGGATCTGTCTTACTTGGTT
GAGCTGAATCCGGCGCTGTTGTACCCGTTTTGCAAGCTTGATGTCGACTACAAGGTCTGCGTAGAGGCCGTGTCT
GAGTCGGATGACCATTCTTCTACTTCTACAGCTCTGGCCCCTTCTTCTACTTCTCCGGCCAAAGACTTTGACTCT
CCGGAAAGTACACGTACTTCCGCTGCCTCAGTCGATGCCTCTACATATACTTCCTCGGCATGTTTTGTTTTGTTT
GAGGCTTCTGTTTTGATTGATTTTTCACCTCGGCGCCGTTTTTACCGCTTGACCCTCGTCAAATTTGTTTCGCAT
TTTGGCCCGTGATAGAATAGCACATGCTTGCCAGCACCTTTACCATGTTTCACTCGCTGTTCTTTTTTAGCCTGC
TCTTTTCTTAGTTTTATGTTTGTTACTTCGTTTTTAGCCTATTCTTTCATCCTAGTTTATGTTTCACTTTCGTTT
TTCCAGCCTGCTTTCATTTTAGTTATGTTTTCCATCGTCCTCTTTTAGTTTATTCACCCTAGCTTTTGTTTTTTC
TTTCGTTTTTTTGTTGTTTCATCCTAGCTTATGTTTTCTTTTCTTTTTAGTCCGCTTTCACCTAGCTTTATGTTT
TCACTTTTCTTTTTCAGCCTGCTTTCATCCTAGCTCTACGTCTCTCACTCCATCGTCCTCTCTTTCTAGCCTACT
CTCTCACCCTAGCTCTACGTCTCTCACTCCCTCGTCCTCTCTTTCCAGCCTGCTCTCTCATCCTAGCTCTACGTC
TCTCACTCCCTCGTCCTCTCTTTCTAGTCCGCTCTCTCACCCTAGCTCTACGTCTCTCACTCCCTCGTCCTCTCT
TTCCAGCCTGCTCTCTCTTCCCAGCTCCACGTCCCGCAACACATCCACCCCGAATATCAACATCTCGCAAGAGCT
CAAGTCCCGCCTCAGGCTGATCTGCAGCCGCTACGTCGGCAACTACACCAAGTCAGAGCCCATCCCGGACTCGGT
CCTCTTGCCGTCCGACTCTCAGATGGAGAAAATGATCATGGAGGCGGCCAAGGTCAAGTCTGAGGGTCTTCAGGT
CTATGGTGGCAATACGGTGGAGGCTGTTGCCTCTGCGTCTGGTCCCAAGAACATCGTTTTGAACCAGCTGTTCAA
ACTCATGATTTCCGACTCGGTTGACATCCGGAGCAGCAGCTGTGATACCGGCTCTTGCTCCCTTCAAGTCTCCTC
CAGCGCCACCGCCGACATCGAAGCTCCGGCTGCGGTGGGCTCCAAGCTGGAGTTGCCGCAGAGTGACGGCCCTGC
AACAGCTTCTGACAAAGCCGAGAAGGCTTATGAGAGTCAGAACGAGGGTCTCCTTGAGGAGGGAAGCTGTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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