Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03905
Gene name
Locationscaffold_04:317307..318447
Strand+
Gene length (bp)1140
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 131 153 22
3 157 179 22
4 200 222 22
5 242 264 22
6 331 353 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03905
MPIMASAVHLSLSLHKRATDALPEYSLPQWTWLVLLLQLIVLVPILTILGYTLQTVYPIFAMIQDDEPPTYRPIS
LESSSQNDPPLRLRPKPATATRPTSTSSLRDINRLLMANGGVLSNFRGFSCALAQALCTSLLMTVFTAALGGLFA
PVATLLASLALVQLSTGWLHIVISRCSPLPFWKRLPTFKRAFEATWRPVTMFWFACEVSLWIPLALTGLTGLTLP
ELQIAGHRQADVHQLNAIFVVKALALLLITLIFSVFLVIPANVVLVRVQASLLPAHDEAIVAFDRSFQGRVEPAV
VGGRGYVSISDAWATFSRDAWRRLLILYVKVFFVFVAGLLLVTSLLLPVAVVIAKSSVPID*
Coding >Ophcf2|03905
ATGCCCATCATGGCCTCCGCCGTCCATCTCTCCCTCTCTCTCCACAAGAGAGCGACCGACGCCCTTCCAGAATAC
AGCCTCCCGCAATGGACCTGGCTCGTCCTCCTCCTCCAGCTCATCGTCCTAGTCCCCATCCTCACCATCCTCGGC
TACACGCTCCAAACAGTCTACCCCATCTTCGCCATGATCCAAGACGACGAACCGCCAACCTACCGTCCCATCTCT
CTCGAATCCTCATCGCAGAATGACCCCCCCCTCCGTCTCCGACCCAAGCCCGCGACCGCCACCCGTCCAACATCA
ACCTCTTCCCTCCGCGACATCAACCGCCTCCTCATGGCCAACGGCGGCGTCTTGTCCAACTTCCGCGGCTTCTCG
TGCGCCCTCGCCCAGGCCCTATGCACGTCTCTCCTCATGACCGTCTTCACCGCCGCTCTTGGTGGCCTGTTCGCC
CCCGTCGCCACTTTGCTCGCCTCGCTGGCCCTCGTCCAGCTCAGCACCGGATGGCTTCACATCGTCATCTCGCGA
TGCTCGCCTCTACCCTTCTGGAAGCGCCTTCCCACCTTCAAGCGTGCCTTTGAAGCCACCTGGCGACCCGTGACC
ATGTTCTGGTTCGCGTGCGAGGTCTCGCTCTGGATCCCCCTGGCCCTCACCGGCCTCACAGGCCTCACCCTCCCC
GAACTACAAATCGCCGGCCACCGCCAAGCCGACGTCCACCAGCTCAACGCCATCTTCGTCGTCAAGGCCCTCGCC
CTCCTGCTCATCACCCTCATCTTCTCCGTCTTCCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTCCAGGCC
TCGCTCCTCCCAGCCCACGACGAAGCCATCGTCGCCTTCGATCGCTCCTTCCAAGGCCGCGTCGAACCCGCCGTC
GTCGGAGGCCGCGGATACGTCTCTATATCGGACGCCTGGGCTACCTTCTCCCGCGACGCCTGGCGTCGTCTCCTC
ATCCTCTACGTCAAGGTCTTTTTCGTCTTCGTCGCAGGCCTCCTCCTCGTCACGAGCCTACTCCTACCCGTCGCC
GTCGTCATCGCCAAGAGCTCGGTTCCCATCGACTGA
Transcript >Ophcf2|03905
ATGCCCATCATGGCCTCCGCCGTCCATCTCTCCCTCTCTCTCCACAAGAGAGCGACCGACGCCCTTCCAGAATAC
AGCCTCCCGCAATGGACCTGGCTCGTCCTCCTCCTCCAGCTCATCGTCCTAGTCCCCATCCTCACCATCCTCGGC
TACACGCTCCAAACAGTCTACCCCATCTTCGCCATGATCCAAGACGACGAACCGCCAACCTACCGTCCCATCTCT
CTCGAATCCTCATCGCAGAATGACCCCCCCCTCCGTCTCCGACCCAAGCCCGCGACCGCCACCCGTCCAACATCA
ACCTCTTCCCTCCGCGACATCAACCGCCTCCTCATGGCCAACGGCGGCGTCTTGTCCAACTTCCGCGGCTTCTCG
TGCGCCCTCGCCCAGGCCCTATGCACGTCTCTCCTCATGACCGTCTTCACCGCCGCTCTTGGTGGCCTGTTCGCC
CCCGTCGCCACTTTGCTCGCCTCGCTGGCCCTCGTCCAGCTCAGCACCGGATGGCTTCACATCGTCATCTCGCGA
TGCTCGCCTCTACCCTTCTGGAAGCGCCTTCCCACCTTCAAGCGTGCCTTTGAAGCCACCTGGCGACCCGTGACC
ATGTTCTGGTTCGCGTGCGAGGTCTCGCTCTGGATCCCCCTGGCCCTCACCGGCCTCACAGGCCTCACCCTCCCC
GAACTACAAATCGCCGGCCACCGCCAAGCCGACGTCCACCAGCTCAACGCCATCTTCGTCGTCAAGGCCCTCGCC
CTCCTGCTCATCACCCTCATCTTCTCCGTCTTCCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTCCAGGCC
TCGCTCCTCCCAGCCCACGACGAAGCCATCGTCGCCTTCGATCGCTCCTTCCAAGGCCGCGTCGAACCCGCCGTC
GTCGGAGGCCGCGGATACGTCTCTATATCGGACGCCTGGGCTACCTTCTCCCGCGACGCCTGGCGTCGTCTCCTC
ATCCTCTACGTCAAGGTCTTTTTCGTCTTCGTCGCAGGCCTCCTCCTCGTCACGAGCCTACTCCTACCCGTCGCC
GTCGTCATCGCCAAGAGCTCGGTTCCCATCGACTGA
Gene >Ophcf2|03905
ATGCCCATCATGGCCTCCGCCGTCCATCTCTCCCTCTCTCTCCACAAGAGAGCGACCGACGCCCTTCCAGAATAC
AGCCTCCCGCAATGGACCTGGCTCGTCCTCCTCCTCCAGCTCATCGTCCTAGTCCCCATCCTCACCATCGTGAGC
CTCATCCAAACGCCCCTCTAAACCCAAGGCTAATCAATTCCCCTTCAGCTCGGCTACACGCTCCAAACAGTCTAC
CCCATCTTCGCCATGATCCAAGACGACGAACCGCCAACCTACCGTCCCATCTCTCTCGAATCCTCATCGCAGAAT
GACCCCCCCCTCCGTCTCCGACCCAAGCCCGCGACCGCCACCCGTCCAACATCAACCTCTTCCCTCCGCGACATC
AACCGCCTCCTCATGGCCAACGGCGGCGTCTTGTCCAACTTCCGCGGCTTCTCGTGCGCCCTCGCCCAGGCCCTA
TGCACGTCTCTCCTCATGACCGTCTTCACCGCCGCTCTTGGTGGCCTGTTCGCCCCCGTCGCCACTTTGCTCGCC
TCGCTGGCCCTCGTCCAGCTCAGCACCGGATGGCTTCACATCGTCATCTCGCGATGCTCGCCTCTACCCTTCTGG
AAGCGCCTTCCCACCTTCAAGCGTGCCTTTGAAGCCACCTGGCGACCCGTGACCATGTTCTGGTTCGCGTGCGAG
GTCTCGCTCTGGATCCCCCTGGCCCTCACCGGCCTCACAGGCCTCACCCTCCCCGAACTACAAATCGCCGGCCAC
CGCCAAGCCGACGTCCACCAGCTCAACGCCATCTTCGTCGTCAAGGCCCTCGCCCTCCTGCTCATCACCCTCATC
TTCTCCGTCTTCCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTCCAGGCCTCGCTCCTCCCAGCCCACGAC
GAAGCCATCGTCGCCTTCGATCGCTCCTTCCAAGGCCGCGTCGAACCCGCCGTCGTCGGAGGCCGCGGATACGTC
TCTATATCGGACGCCTGGGCTACCTTCTCCCGCGACGCCTGGCGTCGTCTCCTCATCCTCTACGTCAAGGTCTTT
TTCGTCTTCGTCGCAGGCCTCCTCCTCGTCACGAGCCTACTCCTACCCGTCGCCGTCGTCATCGCCAAGAGCTCG
GTTCCCATCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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