Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|03901
Gene name
Location	scaffold_04:304654..305887
Strand	+
Gene length (bp)	1233
Transcript length (bp)	1233
Coding sequence length (bp)	1233
Protein length (aa)	411

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 27	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	24	17
2	242	264	22
3	277	299	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	0.56	0.00	1.23
Alive	In ants, during behavior modification	7.98	2.36	13.61
Dead	In ants, recently dead	4.20	0.93	7.47

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.000238	yes
Alive	Dead	0.020711	yes
Dead	Fungus	0.000657	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|03901 MHLAQLNAGFWLVWLLLLIFSFFNSSDDPSSLFYDGSKAYQQRYSLRRAAEANDYLQRPANKVEQAGPERRLLCI GIPSINRTSESFLGYTVATLTDTLTVEDRASIRLVVLLADRRPESQVAYRQPWLGRIADEVLLYGDEGSKGNDSV YRSVPYGERGVGRVEKMRLDHAVLFETCRDYGSPYFALIEDDVVASPDWFAKLKRGLAYVESRSAKTNKDWIYLR LFYSETFMGWNKEEWPSYSQNVFLIYTMVLLAAFITRSLHRKRKSAAGSARSLALIMALVLGLWIPATIALYFAA GRISTSRINPLAWSWHPAREMPNYGCCAQGLVFPRRHLEGVLSLLRRPPFAFAGDQILEDYAGERALSKWALEPS VLQHVGLRQSSAGDRRAEVWNFSFERQRGGSVEGR*
Coding	>Ophcf2\|03901 ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGTCTGGCTGCTTCTCCTCATCTTCAGCTTCTTCAACTCG TCCGATGACCCGAGCTCGCTCTTCTACGACGGCAGCAAGGCCTACCAGCAGAGGTACTCTCTGCGGAGGGCGGCC GAAGCCAACGACTACCTCCAACGTCCGGCGAACAAGGTCGAGCAAGCCGGGCCGGAGAGGAGGCTTCTGTGCATC GGAATCCCGAGCATCAACCGCACATCCGAGTCCTTCCTCGGGTACACGGTGGCGACGCTGACGGATACGCTGACG GTCGAGGACCGGGCTTCGATTCGGCTTGTTGTCTTGCTCGCCGATCGGCGTCCGGAGAGTCAGGTTGCGTACCGT CAGCCGTGGCTGGGCCGCATAGCCGACGAGGTGCTCCTATACGGTGACGAGGGATCCAAGGGGAACGATAGCGTC TACCGCTCCGTTCCGTACGGCGAACGCGGAGTGGGAAGGGTGGAGAAGATGCGTCTGGACCATGCGGTGCTCTTC GAGACGTGTCGCGACTACGGATCTCCCTACTTTGCGCTCATCGAAGACGACGTCGTGGCCTCGCCCGACTGGTTC GCCAAACTGAAAAGGGGGCTTGCCTACGTCGAGTCTCGATCCGCGAAGACGAACAAGGACTGGATATACCTCCGT CTCTTCTACTCGGAGACGTTCATGGGCTGGAACAAGGAGGAATGGCCATCGTACTCGCAAAACGTCTTCTTGATC TACACAATGGTCCTCCTGGCCGCCTTTATAACCCGATCCCTCCACCGGAAGCGAAAGTCAGCAGCCGGCTCAGCC CGTTCTCTGGCCCTCATAATGGCCCTCGTTCTCGGACTCTGGATCCCCGCCACCATAGCCCTCTACTTCGCAGCA GGACGCATCTCGACAAGCCGGATCAACCCGCTCGCCTGGAGCTGGCACCCAGCCCGCGAGATGCCCAACTACGGC TGCTGCGCGCAGGGCCTCGTCTTCCCGCGACGGCACCTTGAAGGGGTGCTGTCTCTGCTTCGGAGGCCGCCGTTT GCGTTTGCCGGCGATCAGATACTGGAGGATTACGCGGGGGAGCGGGCGTTGAGCAAGTGGGCGTTGGAGCCGAGT GTGTTGCAGCATGTTGGTCTGAGGCAGTCTTCTGCTGGTGATAGGAGGGCTGAGGTGTGGAATTTTAGCTTTGAG AGGCAGAGGGGGGGGAGTGTAGAAGGGAGGTGA
Transcript	>Ophcf2\|03901 ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGTCTGGCTGCTTCTCCTCATCTTCAGCTTCTTCAACTCG TCCGATGACCCGAGCTCGCTCTTCTACGACGGCAGCAAGGCCTACCAGCAGAGGTACTCTCTGCGGAGGGCGGCC GAAGCCAACGACTACCTCCAACGTCCGGCGAACAAGGTCGAGCAAGCCGGGCCGGAGAGGAGGCTTCTGTGCATC GGAATCCCGAGCATCAACCGCACATCCGAGTCCTTCCTCGGGTACACGGTGGCGACGCTGACGGATACGCTGACG GTCGAGGACCGGGCTTCGATTCGGCTTGTTGTCTTGCTCGCCGATCGGCGTCCGGAGAGTCAGGTTGCGTACCGT CAGCCGTGGCTGGGCCGCATAGCCGACGAGGTGCTCCTATACGGTGACGAGGGATCCAAGGGGAACGATAGCGTC TACCGCTCCGTTCCGTACGGCGAACGCGGAGTGGGAAGGGTGGAGAAGATGCGTCTGGACCATGCGGTGCTCTTC GAGACGTGTCGCGACTACGGATCTCCCTACTTTGCGCTCATCGAAGACGACGTCGTGGCCTCGCCCGACTGGTTC GCCAAACTGAAAAGGGGGCTTGCCTACGTCGAGTCTCGATCCGCGAAGACGAACAAGGACTGGATATACCTCCGT CTCTTCTACTCGGAGACGTTCATGGGCTGGAACAAGGAGGAATGGCCATCGTACTCGCAAAACGTCTTCTTGATC TACACAATGGTCCTCCTGGCCGCCTTTATAACCCGATCCCTCCACCGGAAGCGAAAGTCAGCAGCCGGCTCAGCC CGTTCTCTGGCCCTCATAATGGCCCTCGTTCTCGGACTCTGGATCCCCGCCACCATAGCCCTCTACTTCGCAGCA GGACGCATCTCGACAAGCCGGATCAACCCGCTCGCCTGGAGCTGGCACCCAGCCCGCGAGATGCCCAACTACGGC TGCTGCGCGCAGGGCCTCGTCTTCCCGCGACGGCACCTTGAAGGGGTGCTGTCTCTGCTTCGGAGGCCGCCGTTT GCGTTTGCCGGCGATCAGATACTGGAGGATTACGCGGGGGAGCGGGCGTTGAGCAAGTGGGCGTTGGAGCCGAGT GTGTTGCAGCATGTTGGTCTGAGGCAGTCTTCTGCTGGTGATAGGAGGGCTGAGGTGTGGAATTTTAGCTTTGAG AGGCAGAGGGGGGGGAGTGTAGAAGGGAGGTGA
Gene	>Ophcf2\|03901 ATGCACTTGGCCCAGCTCAACGCCGGCTTCTGGCTGGTCTGGCTGCTTCTCCTCATCTTCAGCTTCTTCAACTCG TCCGATGACCCGAGCTCGCTCTTCTACGACGGCAGCAAGGCCTACCAGCAGAGGTACTCTCTGCGGAGGGCGGCC GAAGCCAACGACTACCTCCAACGTCCGGCGAACAAGGTCGAGCAAGCCGGGCCGGAGAGGAGGCTTCTGTGCATC GGAATCCCGAGCATCAACCGCACATCCGAGTCCTTCCTCGGGTACACGGTGGCGACGCTGACGGATACGCTGACG GTCGAGGACCGGGCTTCGATTCGGCTTGTTGTCTTGCTCGCCGATCGGCGTCCGGAGAGTCAGGTTGCGTACCGT CAGCCGTGGCTGGGCCGCATAGCCGACGAGGTGCTCCTATACGGTGACGAGGGATCCAAGGGGAACGATAGCGTC TACCGCTCCGTTCCGTACGGCGAACGCGGAGTGGGAAGGGTGGAGAAGATGCGTCTGGACCATGCGGTGCTCTTC GAGACGTGTCGCGACTACGGATCTCCCTACTTTGCGCTCATCGAAGACGACGTCGTGGCCTCGCCCGACTGGTTC GCCAAACTGAAAAGGGGGCTTGCCTACGTCGAGTCTCGATCCGCGAAGACGAACAAGGACTGGATATACCTCCGT CTCTTCTACTCGGAGACGTTCATGGGCTGGAACAAGGAGGAATGGCCATCGTACTCGCAAAACGTCTTCTTGATC TACACAATGGTCCTCCTGGCCGCCTTTATAACCCGATCCCTCCACCGGAAGCGAAAGTCAGCAGCCGGCTCAGCC CGTTCTCTGGCCCTCATAATGGCCCTCGTTCTCGGACTCTGGATCCCCGCCACCATAGCCCTCTACTTCGCAGCA GGACGCATCTCGACAAGCCGGATCAACCCGCTCGCCTGGAGCTGGCACCCAGCCCGCGAGATGCCCAACTACGGC TGCTGCGCGCAGGGCCTCGTCTTCCCGCGACGGCACCTTGAAGGGGTGCTGTCTCTGCTTCGGAGGCCGCCGTTT GCGTTTGCCGGCGATCAGATACTGGAGGATTACGCGGGGGAGCGGGCGTTGAGCAAGTGGGCGTTGGAGCCGAGT GTGTTGCAGCATGTTGGTCTGAGGCAGTCTTCTGCTGGTGATAGGAGGGCTGAGGTGTGGAATTTTAGCTTTGAG AGGCAGAGGGGGGGGAGTGTAGAAGGGAGGTGA

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