Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03893
Gene name
Locationscaffold_04:269461..269983
Strand+
Gene length (bp)522
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3594 0.5323 0.0903 0.2399 0.1206 0.0152 0.0579 0.0729 0.0753 0.0032

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4988
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4511
Ophiocordyceps camponoti-floridani Ophcf2|03893 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4837
Ophiocordyceps kimflemingae Ophio5|7202
Ophiocordyceps subramaniannii Hirsu2|2274
Ophiocordyceps subramaniannii Hirsu2|256

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03893
MVYHKQHREEDGFTKPQLTNAKSKAGKRSKNPSPAPKTSKEVIRQRRNKANKQESAKAVGGDRHAAVQQVDPPKT
FRVNASTASVFATLFDRSESRGAVRWTAFEAAMTDLGFTVMPQFGSIYRFAPPENKGFSNAFSVHRPHKSRMEDY
KMHPLARQLRDLYGWGVETFEVV*
Coding >Ophcf2|03893
ATGGTCTATCACAAGCAACATCGTGAGGAGGATGGCTTTACGAAGCCGCAACTGACCAACGCCAAGTCCAAAGCC
GGCAAACGGTCCAAGAACCCATCTCCGGCCCCGAAGACGAGCAAAGAGGTGATCCGACAGCGACGGAACAAGGCC
AACAAACAGGAATCCGCCAAAGCCGTGGGGGGGGATCGGCATGCCGCGGTACAGCAAGTCGATCCCCCAAAGACG
TTCCGGGTCAACGCCTCCACAGCCAGCGTCTTCGCCACGCTCTTTGACCGATCCGAGTCTCGAGGCGCCGTGAGA
TGGACGGCCTTCGAGGCGGCAATGACGGACCTGGGCTTCACCGTCATGCCGCAATTCGGCTCAATTTACAGGTTC
GCGCCCCCAGAGAACAAGGGTTTCAGCAACGCGTTTTCCGTCCATCGGCCACACAAGTCCCGCATGGAAGACTAC
AAGATGCATCCCTTGGCGCGCCAGTTGAGGGATCTGTACGGATGGGGCGTCGAGACGTTTGAAGTTGTATGA
Transcript >Ophcf2|03893
ATGGTCTATCACAAGCAACATCGTGAGGAGGATGGCTTTACGAAGCCGCAACTGACCAACGCCAAGTCCAAAGCC
GGCAAACGGTCCAAGAACCCATCTCCGGCCCCGAAGACGAGCAAAGAGGTGATCCGACAGCGACGGAACAAGGCC
AACAAACAGGAATCCGCCAAAGCCGTGGGGGGGGATCGGCATGCCGCGGTACAGCAAGTCGATCCCCCAAAGACG
TTCCGGGTCAACGCCTCCACAGCCAGCGTCTTCGCCACGCTCTTTGACCGATCCGAGTCTCGAGGCGCCGTGAGA
TGGACGGCCTTCGAGGCGGCAATGACGGACCTGGGCTTCACCGTCATGCCGCAATTCGGCTCAATTTACAGGTTC
GCGCCCCCAGAGAACAAGGGTTTCAGCAACGCGTTTTCCGTCCATCGGCCACACAAGTCCCGCATGGAAGACTAC
AAGATGCATCCCTTGGCGCGCCAGTTGAGGGATCTGTACGGATGGGGCGTCGAGACGTTTGAAGTTGTATGA
Gene >Ophcf2|03893
ATGGTCTATCACAAGCAACATCGTGAGGAGGATGGCTTTACGAAGCCGCAACTGACCAACGCCAAGTCCAAAGCC
GGCAAACGGTCCAAGAACCCATCTCCGGCCCCGAAGACGAGCAAAGAGGTGATCCGACAGCGACGGAACAAGGCC
AACAAACAGGAATCCGCCAAAGCCGTGGGGGGGGATCGGCATGCCGCGGTACAGCAAGTCGATCCCCCAAAGACG
TTCCGGGTCAACGCCTCCACAGCCAGCGTCTTCGCCACGCTCTTTGACCGATCCGAGTCTCGAGGCGCCGTGAGA
TGGACGGCCTTCGAGGCGGCAATGACGGACCTGGGCTTCACCGTCATGCCGCAATTCGGCTCAATTTACAGGTTC
GCGCCCCCAGAGAACAAGGGTTTCAGCAACGCGTTTTCCGTCCATCGGCCACACAAGTCCCGCATGGAAGACTAC
AAGATGCATCCCTTGGCGCGCCAGTTGAGGGATCTGTACGGATGGGGCGTCGAGACGTTTGAAGTTGTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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