Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03888
Gene name
Locationscaffold_04:252289..253867
Strand+
Gene length (bp)1578
Transcript length (bp)1380
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03345 DDOST_48kD Oligosaccharyltransferase 48 kDa subunit beta 1.5E-151 25 445

GO

GO Term Description Terminal node
GO:0005789 endoplasmic reticulum membrane Yes
GO:0018279 protein N-linked glycosylation via asparagine Yes
GO:0018193 peptidyl-amino acid modification No
GO:0110165 cellular anatomical entity No
GO:0036211 protein modification process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0018196 peptidyl-asparagine modification No
GO:0006486 protein glycosylation No
GO:0043170 macromolecule metabolic process No
GO:0031090 organelle membrane No
GO:0019538 protein metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0005575 cellular_component No
GO:0006807 nitrogen compound metabolic process No
GO:0006487 protein N-linked glycosylation No
GO:0043413 macromolecule glycosylation No
GO:0043412 macromolecule modification No
GO:0070085 glycosylation No
GO:0008150 biological_process No
GO:0016020 membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 422 444 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03888
MRSPLGFVVCLLVAAVAAVSTAGGRVLVVLDDLADRNGYSMMLGDLEARGFDLSYETPRSESVRLSRLGERTYDH
ILFLPVKVKGLGPNMTPKMLIEFVKAGGNMVVALASTTPAPSSLVSVLAEFEVTLPVERTGLVVDHFNYDTLSAA
QKHDVLVLDAPSKAPVGLTDLFVMPGTVLAFPRTSGHLLGQSPLLTPLVRAPFTAYSYNPKEQAEGIDPDDFFGA
GQQLSLVTAIQARNSARIVVVGSAEMLQDKWIEAKVAHVDRTPVKSGNREFAKRLTGWAFQEIGVLRVNSIEHHL
KGSKEMNPGIYRIKNDVSFTISMSEYSWDKWVPFKVPDNDDLQMEFTMLSPFVRLNLRKKKTTKTATIFGRDFQL
PDQHGIFNFRVNYKRELLTYVDEKRTVSVRHIAHDEWPRSYDISAAWPWLSGIWTTVVGWLMFIALWLFSMPMGR
GGSRRHGRG*
Coding >Ophcf2|03888
ATGCGGTCGCCTCTGGGCTTTGTCGTCTGCCTGCTGGTAGCGGCCGTGGCGGCTGTCAGTACGGCGGGTGGTCGT
GTGCTGGTTGTGTTGGATGATTTGGCGGATCGGAATGGGTATTCGATGATGCTGGGCGATCTTGAGGCTCGCGGT
TTCGACCTCTCGTACGAGACGCCTCGCAGTGAGAGCGTTCGTCTTTCCCGTCTCGGCGAGCGAACCTACGACCAC
ATTCTGTTCTTGCCCGTCAAGGTCAAAGGCCTCGGGCCCAATATGACGCCCAAGATGTTGATCGAGTTTGTCAAG
GCTGGAGGCAACATGGTGGTTGCTCTGGCTTCCACCACGCCCGCTCCCTCGTCTCTCGTCTCCGTGTTGGCCGAA
TTCGAGGTGACGTTGCCGGTGGAGAGGACGGGGCTGGTGGTGGACCATTTCAACTACGATACCCTGTCGGCGGCT
CAGAAGCATGACGTGCTCGTCCTCGATGCACCGAGCAAGGCTCCCGTCGGCTTGACCGACCTGTTCGTCATGCCC
GGCACCGTCTTGGCCTTTCCGCGCACTTCTGGTCATCTTCTCGGCCAGAGCCCGCTGTTGACGCCCTTGGTTCGC
GCCCCTTTTACCGCCTACAGTTACAATCCCAAGGAGCAGGCCGAAGGGATCGACCCGGATGACTTTTTCGGCGCC
GGCCAGCAGCTCAGTCTCGTGACGGCTATTCAGGCGCGCAACTCGGCCCGCATCGTCGTCGTCGGCTCGGCGGAG
ATGCTGCAGGATAAGTGGATCGAGGCCAAAGTGGCTCATGTGGACAGGACGCCTGTCAAGTCTGGGAACCGCGAG
TTTGCAAAGAGGCTCACGGGCTGGGCTTTCCAGGAGATTGGCGTGTTGCGCGTCAACTCGATTGAGCATCATCTC
AAGGGGTCCAAGGAGATGAATCCTGGCATTTACCGCATCAAGAACGACGTGTCGTTTACCATCTCCATGTCGGAG
TACTCGTGGGATAAATGGGTGCCCTTCAAGGTTCCCGACAACGACGATCTTCAGATGGAGTTTACGATGCTCTCG
CCATTTGTGCGTCTCAACCTTCGAAAGAAGAAGACGACGAAGACGGCAACCATCTTTGGACGCGACTTTCAGCTT
CCGGACCAGCACGGCATCTTCAACTTCCGCGTCAACTACAAGCGGGAGCTTCTGACGTACGTGGACGAGAAGCGG
ACCGTCAGCGTTAGGCACATCGCCCACGATGAATGGCCTCGCAGCTACGACATCTCCGCAGCCTGGCCGTGGCTG
TCGGGCATCTGGACCACCGTCGTCGGGTGGCTCATGTTTATCGCCCTTTGGCTGTTTAGCATGCCGATGGGGCGA
GGGGGGAGCAGACGCCATGGACGGGGGTGA
Transcript >Ophcf2|03888
ATGCGGTCGCCTCTGGGCTTTGTCGTCTGCCTGCTGGTAGCGGCCGTGGCGGCTGTCAGTACGGCGGGTGGTCGT
GTGCTGGTTGTGTTGGATGATTTGGCGGATCGGAATGGGTATTCGATGATGCTGGGCGATCTTGAGGCTCGCGGT
TTCGACCTCTCGTACGAGACGCCTCGCAGTGAGAGCGTTCGTCTTTCCCGTCTCGGCGAGCGAACCTACGACCAC
ATTCTGTTCTTGCCCGTCAAGGTCAAAGGCCTCGGGCCCAATATGACGCCCAAGATGTTGATCGAGTTTGTCAAG
GCTGGAGGCAACATGGTGGTTGCTCTGGCTTCCACCACGCCCGCTCCCTCGTCTCTCGTCTCCGTGTTGGCCGAA
TTCGAGGTGACGTTGCCGGTGGAGAGGACGGGGCTGGTGGTGGACCATTTCAACTACGATACCCTGTCGGCGGCT
CAGAAGCATGACGTGCTCGTCCTCGATGCACCGAGCAAGGCTCCCGTCGGCTTGACCGACCTGTTCGTCATGCCC
GGCACCGTCTTGGCCTTTCCGCGCACTTCTGGTCATCTTCTCGGCCAGAGCCCGCTGTTGACGCCCTTGGTTCGC
GCCCCTTTTACCGCCTACAGTTACAATCCCAAGGAGCAGGCCGAAGGGATCGACCCGGATGACTTTTTCGGCGCC
GGCCAGCAGCTCAGTCTCGTGACGGCTATTCAGGCGCGCAACTCGGCCCGCATCGTCGTCGTCGGCTCGGCGGAG
ATGCTGCAGGATAAGTGGATCGAGGCCAAAGTGGCTCATGTGGACAGGACGCCTGTCAAGTCTGGGAACCGCGAG
TTTGCAAAGAGGCTCACGGGCTGGGCTTTCCAGGAGATTGGCGTGTTGCGCGTCAACTCGATTGAGCATCATCTC
AAGGGGTCCAAGGAGATGAATCCTGGCATTTACCGCATCAAGAACGACGTGTCGTTTACCATCTCCATGTCGGAG
TACTCGTGGGATAAATGGGTGCCCTTCAAGGTTCCCGACAACGACGATCTTCAGATGGAGTTTACGATGCTCTCG
CCATTTGTGCGTCTCAACCTTCGAAAGAAGAAGACGACGAAGACGGCAACCATCTTTGGACGCGACTTTCAGCTT
CCGGACCAGCACGGCATCTTCAACTTCCGCGTCAACTACAAGCGGGAGCTTCTGACGTACGTGGACGAGAAGCGG
ACCGTCAGCGTTAGGCACATCGCCCACGATGAATGGCCTCGCAGCTACGACATCTCCGCAGCCTGGCCGTGGCTG
TCGGGCATCTGGACCACCGTCGTCGGGTGGCTCATGTTTATCGCCCTTTGGCTGTTTAGCATGCCGATGGGGCGA
GGGGGGAGCAGACGCCATGGACGGGGGTGA
Gene >Ophcf2|03888
ATGCGGTCGCCTCTGGGCTTTGTCGTCTGCCTGCTGGTAGCGGCCGTGGCGGCTGTCAGTACGGCGGGTGGTCGT
GTGCTGGTTGTGTTGGATGATTTGGCGGATCGGAATGGGTATTCGATGATGCTGGGCGATCTTGAGGGTGAGGTT
TTTTTTCTTTGTCTTCACTATTTTTACTCTTTTTTTTTTTTTTTTTTTTCCATTCTGCTAATCATGGTGCAGCTC
GCGGTTTCGACCTCTCGTACGAGACGCCTCGCAGTGAGAGCGTTCGTCTTTCCCGTCTCGGCGAGCGAACCTACG
ACCACATTCTGTTCTTGCCCGTCAAGGTCAAAGGTAGCTGGTTCTCCAGTGCCGCCCAGGCTTTTCTTCCTGCTC
ACCCACGCTTCACAGGCCTCGGGCCCAATATGACGCCCAAGATGTTGATCGAGTTTGTCAAGGCTGGAGGCAACA
TGGTGGTTGCTCTGGCTTCCACCACGCCCGCTCCCTCGTCTCTCGTCTCCGTGTTGGCCGAATTCGAGGTGACGT
TGCCGGTGGAGAGGACGGGGCTGGTGGTGGACCATTTCAACTACGATACCCTGTCGGCGGCTCAGAAGCATGACG
TGCTCGTCCTCGATGCACCGAGCAAGGCTCCCGTCGGCTTGACCGACCTGTTCGTCATGCCCGGCACCGTCTTGG
CCTTTCCGCGCACTTCTGGTCATCTTCTCGGCCAGAGCCCGCTGTTGACGCCCTTGGTTCGCGCCCCTTTTACCG
CCTACAGTTACAATCCCAAGGAGCAGGCCGAAGGGATCGACCCGGATGACTTTTTCGGCGCCGGCCAGCAGCTCA
GTCTCGTGACGGCTATTCAGGCGCGCAACTCGGCCCGCATCGTCGTCGTCGGCTCGGCGGAGATGCTGCAGGATA
AGTGGATCGAGGCCAAAGTGGCTCATGTGGACAGGACGCCTGTCAAGTCTGGGAACCGCGAGTTTGCAAAGAGGC
TCACGGGCTGGGCTTTCCAGGAGATTGGCGTGTTGCGCGTCAACTCGATTGAGCATCATCTCAAGGGGTCCAAGG
AGATGAATCCTGGCATTTACCGCATCAAGAACGACGTGGTGAGTGGCTTAGCGGCATTGTTTTATCTTCTTTACG
GGATGCTGACTGCCTCATGTACAGTCGTTTACCATCTCCATGTCGGAGTACTCGTGGGATAAATGGGTGCCCTTC
AAGGTTCCCGACAACGACGATCTTCAGATGGAGTTTACGATGCTCTCGCCATTTGTGCGTCTCAACCTTCGAAAG
AAGAAGACGACGAAGACGGCAACCATCTTTGGACGCGACTTTCAGCTTCCGGACCAGCACGGCATCTTCAACTTC
CGCGTCAACTACAAGCGGGAGCTTCTGACGTACGTGGACGAGAAGCGGACCGTCAGCGTTAGGCACATCGCCCAC
GATGAATGGCCTCGCAGCTACGACATCTCCGCAGCCTGGCCGTGGCTGTCGGGCATCTGGACCACCGTCGTCGGG
TGGCTCATGTTTATCGCCCTTTGGCTGTTTAGCATGCCGATGGGGCGAGGGGGGAGCAGACGCCATGGACGGGGG
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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