Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03883
Gene name
Locationscaffold_04:234606..236186
Strand+
Gene length (bp)1580
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 1.1E-27 79 329

GO

GO Term Description Terminal node
GO:0016042 lipid catabolic process Yes
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0052689 carboxylic ester hydrolase activity No
GO:0003824 catalytic activity No
GO:0009056 catabolic process No
GO:0008150 biological_process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:1901575 organic substance catabolic process No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0006629 lipid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03883
MPPNETPSLELDSLDSLSDADLGPDSPLAVRPKWMPSPPSRSGRRIFTRLRLVTALASLIIFHLVVCLLRAIPPF
ARPLPPYSGRYAVGSVDIEAPLPDAPRRVASVFDLDSVLFTLYYPSEASVSSVRLRPWLDRPIGPTARGFARLIG
LDIFPVRWLFSSVLWVLAGPVRIPAAVDAPLLASDGDRLPVIVFSHGMASSRTDYTAYIGELASRGFVVAAVEHR
DGSCPGSVIAPHRPVLALPGPAYLRPNLTRSAFKRAQMAVRTAEMLDTIRVLRALNAGRGPDIMAANPRHEGLHL
SSFRDRLALKDRLALAGHSMGATAVLQAESGPLSPPHDAEDGLAGPLLVLHSAAWSRPSSSLFYGRPHFDAVRDF
VAASLRRSSSAWFLTGLDTAHPSISDAPLLEPMLLRLATGFRLRDPLASTRRHANLSAEFLGLSAGHANRPTRPP
SSGSLLAESVTHPSFDHWLSRERSLSFPHDLASQWEIHVSPAAAADDDDEPGKIPNDQA*
Coding >Ophcf2|03883
ATGCCTCCCAACGAAACCCCTTCCCTCGAGCTCGACTCCCTCGACTCCCTCAGCGACGCCGACCTCGGCCCCGAC
TCCCCCCTCGCCGTCCGCCCGAAATGGATGCCGTCGCCTCCGTCCCGCTCCGGCCGTCGCATCTTCACACGCCTC
CGTCTCGTCACGGCTCTCGCCTCCCTCATCATCTTCCATCTCGTCGTCTGCCTCCTCCGCGCTATCCCGCCCTTC
GCACGTCCTCTTCCGCCCTACTCGGGCCGATATGCCGTCGGCTCCGTCGACATCGAAGCTCCACTCCCGGACGCG
CCCCGCCGCGTAGCCTCCGTCTTCGACCTCGACTCGGTCCTCTTCACCTTGTACTATCCGTCCGAAGCATCAGTC
TCGTCAGTTCGTCTTCGCCCTTGGCTCGACCGTCCCATCGGTCCAACGGCGCGAGGATTCGCCCGGCTGATCGGC
CTCGACATCTTCCCCGTCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTGCGCATCCCCGCC
GCCGTCGACGCCCCCTTACTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCCCACGGCATGGCATCT
TCCCGCACCGATTACACGGCCTATATCGGCGAGCTCGCCAGCCGCGGCTTCGTCGTCGCTGCCGTAGAGCACCGC
GACGGCAGCTGTCCCGGCTCCGTCATCGCTCCCCATCGCCCCGTTCTCGCCCTCCCCGGACCCGCTTACCTCCGA
CCCAACCTGACGCGCTCCGCCTTTAAGCGTGCCCAGATGGCCGTCCGTACCGCCGAGATGCTCGACACGATCCGC
GTCCTGCGCGCCCTCAACGCCGGCCGCGGCCCGGACATCATGGCCGCCAATCCCCGTCACGAAGGCCTTCACCTA
TCCTCCTTTCGCGACCGGCTCGCCCTTAAAGATCGTCTCGCCCTCGCAGGCCACTCCATGGGTGCCACCGCCGTC
CTCCAAGCCGAGAGCGGCCCTCTGTCCCCACCCCATGACGCCGAAGACGGCCTCGCCGGTCCGTTGCTTGTCCTC
CACTCCGCCGCCTGGTCACGGCCTTCCTCCAGCCTCTTCTACGGCCGTCCTCACTTCGACGCCGTCCGCGACTTC
GTTGCTGCCTCTCTTCGCCGCTCCTCGTCTGCTTGGTTCCTCACCGGCCTTGACACGGCTCATCCGTCCATCTCG
GACGCACCGCTTCTCGAGCCCATGCTACTGCGACTTGCCACGGGATTTCGTCTTCGCGATCCCCTCGCTTCCACT
CGCAGACACGCCAATCTCTCCGCCGAGTTCCTTGGCCTCTCTGCCGGCCACGCCAACCGCCCTACCCGTCCTCCA
TCCTCCGGAAGCCTCCTCGCCGAGTCCGTCACCCACCCTTCCTTTGACCACTGGCTGAGCCGCGAGCGGAGCCTC
TCCTTTCCCCACGACTTGGCCTCTCAGTGGGAGATCCACGTCAGTCCAGCCGCCGCCGCCGACGACGATGACGAG
CCAGGCAAGATTCCTAACGACCAGGCGTAG
Transcript >Ophcf2|03883
ATGCCTCCCAACGAAACCCCTTCCCTCGAGCTCGACTCCCTCGACTCCCTCAGCGACGCCGACCTCGGCCCCGAC
TCCCCCCTCGCCGTCCGCCCGAAATGGATGCCGTCGCCTCCGTCCCGCTCCGGCCGTCGCATCTTCACACGCCTC
CGTCTCGTCACGGCTCTCGCCTCCCTCATCATCTTCCATCTCGTCGTCTGCCTCCTCCGCGCTATCCCGCCCTTC
GCACGTCCTCTTCCGCCCTACTCGGGCCGATATGCCGTCGGCTCCGTCGACATCGAAGCTCCACTCCCGGACGCG
CCCCGCCGCGTAGCCTCCGTCTTCGACCTCGACTCGGTCCTCTTCACCTTGTACTATCCGTCCGAAGCATCAGTC
TCGTCAGTTCGTCTTCGCCCTTGGCTCGACCGTCCCATCGGTCCAACGGCGCGAGGATTCGCCCGGCTGATCGGC
CTCGACATCTTCCCCGTCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTGCGCATCCCCGCC
GCCGTCGACGCCCCCTTACTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCCCACGGCATGGCATCT
TCCCGCACCGATTACACGGCCTATATCGGCGAGCTCGCCAGCCGCGGCTTCGTCGTCGCTGCCGTAGAGCACCGC
GACGGCAGCTGTCCCGGCTCCGTCATCGCTCCCCATCGCCCCGTTCTCGCCCTCCCCGGACCCGCTTACCTCCGA
CCCAACCTGACGCGCTCCGCCTTTAAGCGTGCCCAGATGGCCGTCCGTACCGCCGAGATGCTCGACACGATCCGC
GTCCTGCGCGCCCTCAACGCCGGCCGCGGCCCGGACATCATGGCCGCCAATCCCCGTCACGAAGGCCTTCACCTA
TCCTCCTTTCGCGACCGGCTCGCCCTTAAAGATCGTCTCGCCCTCGCAGGCCACTCCATGGGTGCCACCGCCGTC
CTCCAAGCCGAGAGCGGCCCTCTGTCCCCACCCCATGACGCCGAAGACGGCCTCGCCGGTCCGTTGCTTGTCCTC
CACTCCGCCGCCTGGTCACGGCCTTCCTCCAGCCTCTTCTACGGCCGTCCTCACTTCGACGCCGTCCGCGACTTC
GTTGCTGCCTCTCTTCGCCGCTCCTCGTCTGCTTGGTTCCTCACCGGCCTTGACACGGCTCATCCGTCCATCTCG
GACGCACCGCTTCTCGAGCCCATGCTACTGCGACTTGCCACGGGATTTCGTCTTCGCGATCCCCTCGCTTCCACT
CGCAGACACGCCAATCTCTCCGCCGAGTTCCTTGGCCTCTCTGCCGGCCACGCCAACCGCCCTACCCGTCCTCCA
TCCTCCGGAAGCCTCCTCGCCGAGTCCGTCACCCACCCTTCCTTTGACCACTGGCTGAGCCGCGAGCGGAGCCTC
TCCTTTCCCCACGACTTGGCCTCTCAGTGGGAGATCCACGTCAGTCCAGCCGCCGCCGCCGACGACGATGACGAG
CCAGGCAAGATTCCTAACGACCAGGCGTAG
Gene >Ophcf2|03883
ATGCCTCCCAACGAAACCCCTTCCCTCGAGCTCGACTCCCTCGACTCCCTCAGCGACGCCGACCTCGGCCCCGAC
TCCCCCCTCGCCGTCCGCCCGAAATGGATGCCGTCGCCTCCGTCCCGCTCCGGCCGTCGCATCTTCACACGCCTC
CGTCTCGTCACGGCTCTCGCCTCCCTCATCATCTTCCATCTCGTCGTCTGCCTCCTCCGCGCTATCCCGCCCTTC
GCACGTCCTCTTCCGCCCTACTCGGGCCGATATGCCGTCGGCTCCGTCGACATCGAAGCTCCACTCCCGGACGCG
CCCCGCCGCGTAGCCTCCGTCTTCGACCTCGACTCGGTCCTCTTCACCTTGTACTATCCGTCCGAAGCATCAGTC
TCGTCAGTTCGTCTTCGCCCTTGGCTCGACCGTCCCATCGGTCCAACGGCGCGAGGATTCGCCCGGCTGATCGGC
CTCGACATCTTCCCCGTCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTGCGCATCCCCGCC
GCCGTCGACGCCCCCTTACTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCCCACGGCATGGCATCT
TCCCGCACCGATTACACGGCCTATATCGGCGAGCTCGCCAGCCGCGGCTTCGTCGTCGCTGCCGTAGAGCACCGC
GACGGCAGCTGTCCCGGCTCCGTCATCGCTCCCCATCGCCCCGTTCTCGCCCTCCCCGGACCCGCTTACCTCCGA
CCCAACCTGACGCGCTCCGCCTTTAAGCGTGCCCAGATGGCCGTCCGTACCGCCGAGATGCTCGACACGATCCGC
GTCCTGCGCGCCCTCAACGCCGGCCGCGGCCCGGACATCATGGCCGCCAATCCCCGTCACGAAGGCCTTCACCTA
TCCTCCTTTCGCGACCGGCTCGCCCTTAAAGATCGTCTCGCCCTCGCAGGCCACTCCATGGGTGCCACCGCCGTC
CTCCAAGCCGTTCATTCCCTCCCGCCCCGGTCCCCGTCATCGCCCTCGACCCGGGCAAGGAGAGCGGCCCTCTGT
CCCCACCCCATGACGCCGAAGACGGCCTCGCCGGTCCGTTGCTTGTCCTCCACTCCGCCGCCTGGTCACGGCCTT
CCTCCAGCCTCTTCTACGGCCGTCCTCACTTCGACGCCGTCCGCGACTTCGTTGCTGCCTCTCTTCGCCGCTCCT
CGTCTGCTTGGTTCCTCACCGGCCTTGACACGGCTCATCCGTCCATCTCGGACGCACCGCTTCTCGAGCCCATGC
TACTGCGACTTGCCACGGGATTTCGTCTTCGCGATCCCCTCGCTTCCACTCGCAGACACGCCAATCTCTCCGCCG
AGTTCCTTGGCCTCTCTGCCGGCCACGCCAACCGCCCTACCCGTCCTCCATCCTCCGGAAGCCTCCTCGCCGAGT
CCGTCACCCACCCTTCCTTTGACCACTGGCTGAGCCGCGAGCGGAGCCTCTCCTTTCCCCACGACTTGGCCTCTC
AGTGGGAGATCCACGTCAGTCCAGCCGCCGCCGCCGACGACGATGACGAGCCAGGCAAGATTCCTAACGACCAGG
CGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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