© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03876 |
| Gene name | |
| Location | scaffold_04:213499..215270 |
| Strand | - |
| Gene length (bp) | 1771 |
| Transcript length (bp) | 1647 |
| Coding sequence length (bp) | 1647 |
| Protein length (aa) | 549 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 1.2E-07 | 43 | 266 |
| PF02872 | 5_nucleotid_C | 5'-nucleotidase, C-terminal domain | 3.9E-06 | 384 | 437 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0009166 | nucleotide catabolic process | Yes |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0046434 | organophosphate catabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0034655 | nucleobase-containing compound catabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:1901292 | nucleoside phosphate catabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0046700 | heterocycle catabolic process | No |
| GO:0044248 | cellular catabolic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:1901361 | organic cyclic compound catabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044270 | cellular nitrogen compound catabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0019439 | aromatic compound catabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03876 MPRATPPLLLLFLLALPGVRPSQPGAVRPVAAPMRPLPWGQLNFLHTTDTHGWLSGHLGEPQYSADWGDYVSFAT HMRRRAEEAGSDLLVVDTGDRVEGNGLYDASVPKGRYELDILAEQHMDIACVGNHELYRRSTIIREHNQTVPRLG DAYIASNVDYMDAETGEMSPLAPRYRKFKTKKLGLTVVAFGFLFDFVGNANNSRVTPVADAISQPWFQQAMHEKP DVFVVAAHIGVRMPELRAIFTALRKQNWHIPILFFGGHAHVRDAVRFDSLSVALASGRYLESIGWMSVDNVRSKD PPSPSSAVTISRKYLDNNLLGMYHHTGLNASTFPTDAGRRTTKEITAARAALKLDDRFGCAPRDLWTDRAPYPGN ASVYTWLEEELLPSIVVNASRAHVPRLAFINTGGIRFDIFKGPFTRDNLMAVSPFDNRFVFVPDVPYPIARKLLA ILNSGGIDDLGTDGDDTLRQATPSHRPPQCIQSRIGFPGTGDAEKVDVVFIDFLRPWLVAALKFAGGDYADADVR PYMEATFTHELGLWVERNWLGDC* |
| Coding | >Ophcf2|03876 ATGCCTCGAGCCACGCCTCCTCTCCTCCTCCTCTTCCTCCTCGCCCTCCCAGGCGTCCGCCCGTCACAGCCCGGC GCGGTCCGACCCGTTGCCGCGCCGATGCGACCTCTTCCCTGGGGACAGCTCAACTTCTTACACACGACGGATACG CACGGCTGGCTGAGCGGTCATCTCGGGGAGCCGCAGTACTCGGCCGACTGGGGGGACTACGTCTCTTTCGCGACG CATATGCGGAGGCGTGCTGAGGAGGCGGGATCGGATCTCCTCGTCGTCGATACGGGGGATCGTGTCGAGGGGAAT GGGCTCTACGATGCTTCGGTGCCCAAGGGTCGGTATGAGCTTGATATCTTGGCTGAGCAGCACATGGATATCGCC TGCGTCGGCAACCACGAGCTCTACAGACGCAGCACGATAATCCGAGAGCACAACCAGACGGTCCCTCGCCTGGGA GACGCGTACATAGCTTCCAACGTGGACTACATGGACGCAGAGACGGGTGAGATGTCGCCTCTCGCCCCCCGATAC CGCAAGTTCAAAACAAAGAAGCTTGGTCTCACCGTCGTGGCCTTTGGTTTCCTCTTCGATTTCGTCGGCAATGCG AACAACTCGCGTGTCACGCCCGTGGCCGACGCCATCAGCCAGCCTTGGTTTCAGCAGGCCATGCACGAGAAGCCC GATGTTTTCGTCGTGGCCGCTCACATTGGCGTCCGGATGCCGGAGTTGCGAGCCATCTTCACCGCCCTGCGAAAG CAGAATTGGCATATCCCCATCCTATTCTTCGGAGGTCACGCCCACGTCCGAGACGCCGTTCGCTTCGACTCCCTT TCCGTCGCCCTAGCTTCAGGCCGCTATCTCGAAAGCATAGGCTGGATGTCCGTCGACAATGTCCGGTCCAAGGAT CCGCCTTCCCCATCTTCCGCCGTCACCATCTCCCGCAAATACCTCGACAACAACCTGTTGGGCATGTACCATCAC ACCGGCCTCAACGCCAGCACCTTTCCCACCGACGCCGGTCGTCGTACCACCAAGGAAATAACCGCTGCCCGAGCA GCCCTCAAGCTCGACGATCGCTTCGGCTGCGCGCCCCGCGATCTCTGGACGGATCGAGCGCCGTATCCCGGAAAC GCCAGCGTTTATACCTGGTTGGAGGAGGAGCTTCTCCCCTCCATCGTCGTCAACGCCTCCCGCGCTCATGTTCCG CGTCTGGCCTTTATCAACACGGGCGGCATCCGCTTCGACATCTTCAAGGGTCCCTTTACACGCGACAACTTGATG GCAGTCAGCCCATTCGACAACCGCTTCGTCTTCGTCCCCGACGTCCCCTACCCCATCGCCCGGAAACTACTAGCC ATCCTCAACAGCGGAGGCATAGACGACCTCGGCACCGACGGCGACGACACCCTCCGCCAGGCCACGCCCTCTCAC CGCCCGCCGCAATGCATCCAATCGCGCATCGGCTTCCCCGGTACGGGAGATGCGGAAAAGGTAGACGTCGTCTTC ATAGACTTCTTGAGGCCTTGGCTCGTGGCCGCCCTCAAGTTCGCGGGGGGGGACTACGCCGATGCGGATGTGAGG CCCTACATGGAGGCGACCTTCACGCACGAGTTGGGGCTTTGGGTCGAGAGGAATTGGCTTGGCGATTGTTGA |
| Transcript | >Ophcf2|03876 ATGCCTCGAGCCACGCCTCCTCTCCTCCTCCTCTTCCTCCTCGCCCTCCCAGGCGTCCGCCCGTCACAGCCCGGC GCGGTCCGACCCGTTGCCGCGCCGATGCGACCTCTTCCCTGGGGACAGCTCAACTTCTTACACACGACGGATACG CACGGCTGGCTGAGCGGTCATCTCGGGGAGCCGCAGTACTCGGCCGACTGGGGGGACTACGTCTCTTTCGCGACG CATATGCGGAGGCGTGCTGAGGAGGCGGGATCGGATCTCCTCGTCGTCGATACGGGGGATCGTGTCGAGGGGAAT GGGCTCTACGATGCTTCGGTGCCCAAGGGTCGGTATGAGCTTGATATCTTGGCTGAGCAGCACATGGATATCGCC TGCGTCGGCAACCACGAGCTCTACAGACGCAGCACGATAATCCGAGAGCACAACCAGACGGTCCCTCGCCTGGGA GACGCGTACATAGCTTCCAACGTGGACTACATGGACGCAGAGACGGGTGAGATGTCGCCTCTCGCCCCCCGATAC CGCAAGTTCAAAACAAAGAAGCTTGGTCTCACCGTCGTGGCCTTTGGTTTCCTCTTCGATTTCGTCGGCAATGCG AACAACTCGCGTGTCACGCCCGTGGCCGACGCCATCAGCCAGCCTTGGTTTCAGCAGGCCATGCACGAGAAGCCC GATGTTTTCGTCGTGGCCGCTCACATTGGCGTCCGGATGCCGGAGTTGCGAGCCATCTTCACCGCCCTGCGAAAG CAGAATTGGCATATCCCCATCCTATTCTTCGGAGGTCACGCCCACGTCCGAGACGCCGTTCGCTTCGACTCCCTT TCCGTCGCCCTAGCTTCAGGCCGCTATCTCGAAAGCATAGGCTGGATGTCCGTCGACAATGTCCGGTCCAAGGAT CCGCCTTCCCCATCTTCCGCCGTCACCATCTCCCGCAAATACCTCGACAACAACCTGTTGGGCATGTACCATCAC ACCGGCCTCAACGCCAGCACCTTTCCCACCGACGCCGGTCGTCGTACCACCAAGGAAATAACCGCTGCCCGAGCA GCCCTCAAGCTCGACGATCGCTTCGGCTGCGCGCCCCGCGATCTCTGGACGGATCGAGCGCCGTATCCCGGAAAC GCCAGCGTTTATACCTGGTTGGAGGAGGAGCTTCTCCCCTCCATCGTCGTCAACGCCTCCCGCGCTCATGTTCCG CGTCTGGCCTTTATCAACACGGGCGGCATCCGCTTCGACATCTTCAAGGGTCCCTTTACACGCGACAACTTGATG GCAGTCAGCCCATTCGACAACCGCTTCGTCTTCGTCCCCGACGTCCCCTACCCCATCGCCCGGAAACTACTAGCC ATCCTCAACAGCGGAGGCATAGACGACCTCGGCACCGACGGCGACGACACCCTCCGCCAGGCCACGCCCTCTCAC CGCCCGCCGCAATGCATCCAATCGCGCATCGGCTTCCCCGGTACGGGAGATGCGGAAAAGGTAGACGTCGTCTTC ATAGACTTCTTGAGGCCTTGGCTCGTGGCCGCCCTCAAGTTCGCGGGGGGGGACTACGCCGATGCGGATGTGAGG CCCTACATGGAGGCGACCTTCACGCACGAGTTGGGGCTTTGGGTCGAGAGGAATTGGCTTGGCGATTGTTGA |
| Gene | >Ophcf2|03876 ATGCCTCGAGCCACGCCTCCTCTCCTCCTCCTCTTCCTCCTCGCCCTCCCAGGCGTCCGCCCGTCACAGCCCGGC GCGGTCCGACCCGTTGCCGCGCCGATGCGACCTCTTCCCTGGGGACAGCTCAACTTCTTACACACGACGGATACG CACGGCTGGCTGAGCGGTCATCTCGGGGAGCCGCAGTACTCGGCCGACTGGGGGGACTACGTCTCTTTCGCGACG CATATGCGGAGGCGTGCTGAGGAGGCGGGATCGGATCTCCTCGTCGTCGATACGGGGGATCGTGTCGAGGGGAAT GGGCTCTACGATGCTTCGGTGCCCAAGGGTCGGTATGAGCTTGATATCTTGGCTGAGCAGCACATGGATATCGCC TGCGTCGGCAACCACGAGCTCTACAGACGCAGCACGATAATCCGAGAGCACAACCAGACGGTCCCTCGCCTGGGA GACGCGTACATAGCTTCCAACGTGGACTACATGGACGCAGAGACGGGTGAGATGTCGCCTCTCGCCCCCCGATAC CGCAAGTTCAAAACAAAGAAGCTTGGTCTCACCGTCGTGGCCTTTGGTTTCCTCTTCGATTTCGTCGGCAATGCG AACAACTCGCGTGTCACGCCCGTGGCCGACGCCATCAGCCAGCCTTGGTTTCAGCAGGCCATGCACGAGAAGCCC GATGTTTTCGTCGTGGCCGCTCACATTGGCGTCCGGATGCCGGAGTTGCGAGCCATCTTCACCGCCCTGCGAAAG CAGAATTGGCATATCCCCATCCTATTCTTCGGAGGTCACGCCCACGTCCGAGACGCCGTTCGCTTCGACTCCCTT TCCGTCGCCCTAGCTTCAGGCCGCTATCTCGAAAGCATAGGCTGGATGTCCGTCGACAATGTCCGGTCCAAGGAT CCGCCTTCCCCATCTTCCGCCGTCACCATCTCCCGCAAATACCTCGACAACAACCTGTTGGGCATGTACCATCAC ACCGGCCTCAACGCCAGCACCTTTCCCACCGACGCCGGTCGTCGTACCACCAAGGAAATAACCGCTGCCCGAGCA GCCCTCAAGCTCGACGATCGCTTCGGCTGCGCGCCCCGCGATCTCTGGACGGATCGAGCGCCGTATCCCGGAAAC GCCAGCGTTTATACCTGGTTGGAGGAGGAGCTTCTCCCCTCCATCGTCGTCAACGCCTCCCGCGCTCATGTTCCG CGTCTGGCCTTTATCAACACGGGCGGCATCCGCTTCGACATCTTCAAGGGTCCCTTTACACGCGACAACTTGATG GCAGTCAGCCCATTCGACAACCGCTTCGTCTTCGTCCCCGACGTCCCCTACCCCATCGCCCGGAAACTACTAGCC ATCCTCAACAGCGGAGGCATAGTCGACCTCCCCCTCCGCATGCCACCCTCCCCCCCGAACCCCCCCGCCCCGAAC TCCGCCGCCGCCGCCGCCGAACCGAACCCGGAACCCCCCCCCAACCCTCCTCGCCGGCTACACCACAAAGGACGA CCTCGGCACCGACGGCGACGACACCCTCCGCCAGGCCACGCCCTCTCACCGCCCGCCGCAATGCATCCAATCGCG CATCGGCTTCCCCGGTACGGGAGATGCGGAAAAGGTAGACGTCGTCTTCATAGACTTCTTGAGGCCTTGGCTCGT GGCCGCCCTCAAGTTCGCGGGGGGGGACTACGCCGATGCGGATGTGAGGCCCTACATGGAGGCGACCTTCACGCA CGAGTTGGGGCTTTGGGTCGAGAGGAATTGGCTTGGCGATTGTTGA |