Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03874
Gene name
Locationscaffold_04:208605..209697
Strand-
Gene length (bp)1092
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 181 203 22
2 279 298 19
3 302 324 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03874
MEQNCLSPARPLIPSWTATPIANLTLSAGGLLALADLNTVANRTVVAGGSSWLDALVLAPGLHYQQAADALDEQG
AEAVAVAVEVGDGFERRHVVSNAALVAFLRRLWLDATERPLMLDVSRAGAGEKRLGRRLSRLVCRRPRLPSPTRS
SSSSASSSGLPLQVDRLSHILYLLSPLLTTTASTFMMLLGDWWGLTFIIALMVSRSLNIWTIKQRTLPITTQLLS
TLPIKPPSPLDDPNDDRPTEYAIDLGDNRTALLVGLGSDLRALTTRTRLRPQTVLGGYLEAGSKLLVYMVAALSG
NLSQAGAMVLMVLLLVSAGLLGLSNARASGLHINGCVATLRLRPAPGSAVDEGESERRVETLL*
Coding >Ophcf2|03874
ATGGAACAAAACTGCCTCAGCCCTGCCCGCCCCTTGATCCCCTCGTGGACCGCCACGCCCATCGCCAACCTCACC
CTCTCAGCCGGTGGCCTCCTGGCGCTGGCCGATCTCAACACTGTCGCGAACCGGACTGTCGTGGCTGGCGGATCC
TCTTGGCTTGACGCCTTGGTTCTCGCGCCTGGCTTGCATTACCAGCAGGCTGCGGACGCGTTGGATGAGCAGGGG
GCCGAGGCTGTTGCCGTTGCCGTCGAGGTGGGCGATGGCTTCGAGAGACGTCATGTGGTTAGCAATGCGGCGCTC
GTTGCTTTCCTTAGGCGTCTCTGGCTTGATGCTACGGAGAGGCCTCTTATGCTGGATGTTTCGAGAGCAGGGGCC
GGGGAGAAGAGGCTGGGTCGCAGGTTGAGCCGCCTGGTGTGCCGTCGTCCGAGGCTTCCATCGCCAACACGATCG
TCTTCGTCCTCGGCATCCTCCTCAGGTCTACCGCTTCAAGTCGATCGCCTCAGCCATATCCTCTACCTCCTGAGC
CCTCTCCTAACAACCACGGCGTCGACCTTTATGATGCTCCTCGGCGACTGGTGGGGACTGACCTTTATCATAGCC
CTCATGGTCTCCCGCAGCCTCAACATCTGGACCATCAAGCAGCGCACCCTCCCCATAACAACCCAGCTCCTCTCA
ACCCTACCTATCAAGCCGCCCTCCCCCCTCGACGACCCCAACGACGACCGCCCGACAGAGTACGCCATCGACCTT
GGAGACAATCGAACCGCCCTCCTCGTCGGTCTCGGCTCCGATCTGCGCGCCCTCACCACACGCACGCGGCTGCGA
CCTCAAACGGTCCTTGGCGGCTACCTCGAAGCTGGCTCCAAGCTGCTAGTCTACATGGTGGCCGCCCTCAGCGGT
AACCTGTCCCAGGCGGGCGCCATGGTTCTCATGGTCCTGCTGCTGGTCAGCGCTGGCCTGCTTGGTCTGAGCAAC
GCCCGTGCCAGCGGCTTGCACATCAACGGCTGCGTCGCCACCTTGAGGCTGCGGCCGGCCCCGGGATCGGCCGTT
GATGAGGGCGAGAGCGAGCGCCGCGTCGAGACTTTGCTTTAG
Transcript >Ophcf2|03874
ATGGAACAAAACTGCCTCAGCCCTGCCCGCCCCTTGATCCCCTCGTGGACCGCCACGCCCATCGCCAACCTCACC
CTCTCAGCCGGTGGCCTCCTGGCGCTGGCCGATCTCAACACTGTCGCGAACCGGACTGTCGTGGCTGGCGGATCC
TCTTGGCTTGACGCCTTGGTTCTCGCGCCTGGCTTGCATTACCAGCAGGCTGCGGACGCGTTGGATGAGCAGGGG
GCCGAGGCTGTTGCCGTTGCCGTCGAGGTGGGCGATGGCTTCGAGAGACGTCATGTGGTTAGCAATGCGGCGCTC
GTTGCTTTCCTTAGGCGTCTCTGGCTTGATGCTACGGAGAGGCCTCTTATGCTGGATGTTTCGAGAGCAGGGGCC
GGGGAGAAGAGGCTGGGTCGCAGGTTGAGCCGCCTGGTGTGCCGTCGTCCGAGGCTTCCATCGCCAACACGATCG
TCTTCGTCCTCGGCATCCTCCTCAGGTCTACCGCTTCAAGTCGATCGCCTCAGCCATATCCTCTACCTCCTGAGC
CCTCTCCTAACAACCACGGCGTCGACCTTTATGATGCTCCTCGGCGACTGGTGGGGACTGACCTTTATCATAGCC
CTCATGGTCTCCCGCAGCCTCAACATCTGGACCATCAAGCAGCGCACCCTCCCCATAACAACCCAGCTCCTCTCA
ACCCTACCTATCAAGCCGCCCTCCCCCCTCGACGACCCCAACGACGACCGCCCGACAGAGTACGCCATCGACCTT
GGAGACAATCGAACCGCCCTCCTCGTCGGTCTCGGCTCCGATCTGCGCGCCCTCACCACACGCACGCGGCTGCGA
CCTCAAACGGTCCTTGGCGGCTACCTCGAAGCTGGCTCCAAGCTGCTAGTCTACATGGTGGCCGCCCTCAGCGGT
AACCTGTCCCAGGCGGGCGCCATGGTTCTCATGGTCCTGCTGCTGGTCAGCGCTGGCCTGCTTGGTCTGAGCAAC
GCCCGTGCCAGCGGCTTGCACATCAACGGCTGCGTCGCCACCTTGAGGCTGCGGCCGGCCCCGGGATCGGCCGTT
GATGAGGGCGAGAGCGAGCGCCGCGTCGAGACTTTGCTTTAG
Gene >Ophcf2|03874
ATGGAACAAAACTGCCTCAGCCCTGCCCGCCCCTTGATCCCCTCGTGGACCGCCACGCCCATCGCCAACCTCACC
CTCTCAGCCGGTGGCCTCCTGGCGCTGGCCGATCTCAACACTGTCGCGAACCGGACTGTCGTGGCTGGCGGATCC
TCTTGGCTTGACGCCTTGGTTCTCGCGCCTGGCTTGCATTACCAGCAGGCTGCGGACGCGTTGGATGAGCAGGGG
GCCGAGGCTGTTGCCGTTGCCGTCGAGGTGGGCGATGGCTTCGAGAGACGTCATGTGGTTAGCAATGCGGCGCTC
GTTGCTTTCCTTAGGCGTCTCTGGCTTGATGCTACGGAGAGGCCTCTTATGCTGGATGTTTCGAGAGCAGGGGCC
GGGGAGAAGAGGCTGGGTCGCAGGTTGAGCCGCCTGGTGTGCCGTCGTCCGAGGCTTCCATCGCCAACACGATCG
TCTTCGTCCTCGGCATCCTCCTCAGGTCTACCGCTTCAAGTCGATCGCCTCAGCCATATCCTCTACCTCCTGAGC
CCTCTCCTAACAACCACGGCGTCGACCTTTATGATGCTCCTCGGCGACTGGTGGGGACTGACCTTTATCATAGCC
CTCATGGTCTCCCGCAGCCTCAACATCTGGACCATCAAGCAGCGCACCCTCCCCATAACAACCCAGCTCCTCTCA
ACCCTACCTATCAAGCCGCCCTCCCCCCTCGACGACCCCAACGACGACCGCCCGACAGAGTACGCCATCGACCTT
GGAGACAATCGAACCGCCCTCCTCGTCGGTCTCGGCTCCGATCTGCGCGCCCTCACCACACGCACGCGGCTGCGA
CCTCAAACGGTCCTTGGCGGCTACCTCGAAGCTGGCTCCAAGCTGCTAGTCTACATGGTGGCCGCCCTCAGCGGT
AACCTGTCCCAGGCGGGCGCCATGGTTCTCATGGTCCTGCTGCTGGTCAGCGCTGGCCTGCTTGGTCTGAGCAAC
GCCCGTGCCAGCGGCTTGCACATCAACGGCTGCGTCGCCACCTTGAGGCTGCGGCCGGCCCCGGGATCGGCCGTT
GATGAGGGCGAGAGCGAGCGCCGCGTCGAGACTTTGCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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