© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03860 |
| Gene name | |
| Location | scaffold_04:144426..145582 |
| Strand | + |
| Gene length (bp) | 1156 |
| Transcript length (bp) | 882 |
| Coding sequence length (bp) | 882 |
| Protein length (aa) | 294 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11807 | UstYa | Mycotoxin biosynthesis protein UstYa | 1.0E-48 | 28 | 246 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0043386 | mycotoxin biosynthetic process | Yes |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0009404 | toxin metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0009403 | toxin biosynthetic process | No |
| GO:0019748 | secondary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0043385 | mycotoxin metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044550 | secondary metabolite biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 59 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 0.05 | 0.00 | 0.25 |
| Alive | In ants, during behavior modification | 2.84 | 0.18 | 5.49 |
| Dead | In ants, recently dead | 1.82 | 0.00 | 3.80 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.284330 | no |
| Alive | Dead | 0.292726 | no |
| Dead | Fungus | 0.284330 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03860 MAKYFKIEASPWKDGEDGGQDTQESRIPPRRSLLSRAVAIQAVFLIANLIILLFNVYTWHSVRSHADPHNPTPFR NVISYEARPFDVQAIYLENGTLNPHKTNSFNGPPRRDFEEAWEKLMKHQNVRVPEDELGQYAGDQSIVKLEDGSG YYTTVAVFHGLHCIRRLHHALYPEHYYPGLSEEETFILKRHTEHCLDWLRQYVQCNADTTLIPIQWAVDSPGPVS TDKGKHQCAVWEPIYEWMAEHSFNPFEPGLLVHPTFGNPYDKSAKHGPSLGIAPLGKGGLFHGKSAHG* |
| Coding | >Ophcf2|03860 ATGGCAAAATACTTCAAGATCGAAGCCTCGCCGTGGAAAGATGGAGAGGATGGCGGCCAGGACACGCAAGAGAGT CGCATACCGCCGCGGCGCTCGCTGCTCAGTCGAGCAGTAGCCATCCAAGCCGTCTTCCTCATCGCCAACTTGATC ATTCTTCTGTTCAACGTCTACACGTGGCACTCAGTCCGAAGCCATGCCGACCCTCATAACCCGACTCCTTTTCGA AACGTCATCTCGTACGAAGCACGGCCCTTCGACGTTCAGGCCATCTACCTCGAGAACGGGACCCTCAACCCTCAC AAGACAAACTCGTTCAACGGACCACCGCGGAGAGACTTTGAAGAAGCGTGGGAAAAGCTCATGAAGCATCAAAAC GTCCGGGTTCCGGAAGATGAGCTGGGGCAGTACGCCGGCGACCAGTCCATCGTCAAACTCGAAGATGGAAGCGGC TATTACACCACCGTCGCCGTCTTCCACGGCCTTCACTGCATTCGGAGGCTTCACCACGCCTTGTATCCCGAGCAC TATTATCCAGGTCTCTCAGAAGAGGAGACGTTCATCTTGAAGCGCCATACTGAGCACTGCCTCGACTGGCTGAGA CAGTATGTGCAGTGCAACGCTGACACGACCCTCATTCCAATCCAATGGGCCGTCGACTCTCCCGGACCGGTTTCG ACCGACAAGGGGAAACACCAGTGTGCTGTCTGGGAGCCCATCTACGAATGGATGGCCGAGCATTCCTTCAACCCG TTCGAGCCCGGTCTTCTCGTCCACCCAACTTTTGGAAATCCTTATGACAAGTCGGCTAAGCACGGGCCGAGCTTG GGGATTGCTCCGCTTGGGAAAGGCGGGTTGTTTCACGGAAAGTCGGCACATGGCTGA |
| Transcript | >Ophcf2|03860 ATGGCAAAATACTTCAAGATCGAAGCCTCGCCGTGGAAAGATGGAGAGGATGGCGGCCAGGACACGCAAGAGAGT CGCATACCGCCGCGGCGCTCGCTGCTCAGTCGAGCAGTAGCCATCCAAGCCGTCTTCCTCATCGCCAACTTGATC ATTCTTCTGTTCAACGTCTACACGTGGCACTCAGTCCGAAGCCATGCCGACCCTCATAACCCGACTCCTTTTCGA AACGTCATCTCGTACGAAGCACGGCCCTTCGACGTTCAGGCCATCTACCTCGAGAACGGGACCCTCAACCCTCAC AAGACAAACTCGTTCAACGGACCACCGCGGAGAGACTTTGAAGAAGCGTGGGAAAAGCTCATGAAGCATCAAAAC GTCCGGGTTCCGGAAGATGAGCTGGGGCAGTACGCCGGCGACCAGTCCATCGTCAAACTCGAAGATGGAAGCGGC TATTACACCACCGTCGCCGTCTTCCACGGCCTTCACTGCATTCGGAGGCTTCACCACGCCTTGTATCCCGAGCAC TATTATCCAGGTCTCTCAGAAGAGGAGACGTTCATCTTGAAGCGCCATACTGAGCACTGCCTCGACTGGCTGAGA CAGTATGTGCAGTGCAACGCTGACACGACCCTCATTCCAATCCAATGGGCCGTCGACTCTCCCGGACCGGTTTCG ACCGACAAGGGGAAACACCAGTGTGCTGTCTGGGAGCCCATCTACGAATGGATGGCCGAGCATTCCTTCAACCCG TTCGAGCCCGGTCTTCTCGTCCACCCAACTTTTGGAAATCCTTATGACAAGTCGGCTAAGCACGGGCCGAGCTTG GGGATTGCTCCGCTTGGGAAAGGCGGGTTGTTTCACGGAAAGTCGGCACATGGCTGA |
| Gene | >Ophcf2|03860 ATGGCAAAATACTTCAAGATCGAAGCCTCGCCGTGGAAAGATGGAGAGGATGGCGGCCAGGACACGCAAGAGAGT CGCATACCGCCGCGGCGCTCGCTGCTCAGTCGAGCAGTAGCCATCCAAGCCGTCTTCCTCATCGCCAACTTGATC ATTCTTCTGTTCAACGTCTACACGTGGCACTCAGTCCGAAGCCATGCCGACCCTCATAACCCGAGTTTGTCTATG TGGCTCAGGAGTGAAAAGAGATGACAAGCTAATGCAAACACAACAGCTCCTTTTCGAAACGTCATCTCGTACGAA GCACGGCCCTTCGACGTTCAGGCCATCTACCTCGAGAACGGGACCCTCAACCCTCACAAGACAAACTCGTTCAAC GGACCACCGCGGAGAGACTTTGAAGAAGCGTGGGAAAAGCTCATGAAGCGTGGGACTCCCTCCGTCTTCTTGACA CCCGTAATGTACTTACCGTCGTCTCAGATCAAAACGTCCGGGTTCCGGAAGATGAGCTGGGGCAGTACGCCGGCG ACCAGTCCATCGTCAAACTCGAAGATGGAAGCGGCTATTACACCACCGTCGCCGTCTTCCACGGCCTTCACTGCA TTCGGAGGCTTCACCACGCCTTGTATCCCGAGCACTATTATCCAGGTCTCTCAGAAGAGGAGACGTTCATCTTGA AGCGCCATACTGGTAAGACGGTCTCGTCTAGCCGAGTTCTTGCGTCTAACGGTCGCCTTGATTAGAGCACTGCCT CGACTGGCTGAGACAGTATGTGCAGTGCAACGCTGACACGACCCTCATTCCAATCCAATGGGCCGTCGAGTGAGT CGCCCCAGTTTCCGCGGACTCTGTCCAGATCCTAATTCGAGACTGGCAGCTCTCCCGGACCGGTTTCGACCGACA AGGGGAAACACCAGTGTGCTGTCTGGGAGCCCATCTACGAATGGATGGCCGAGCATTCCTTCAACCCGTTCGAGC CCGGTCTTCTCGTCCACCCAACTTTTGGTGAGCGCCGCTTGGTTCGTGGCTGCGGTGATCTTTTGGCTGACCATG TTGAGCAGGAAATCCTTATGACAAGTCGGCTAAGCACGGGCCGAGCTTGGGGATTGCTCCGCTTGGGAAAGGCGG GTTGTTTCACGGAAAGTCGGCACATGGCTGA |