Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03847
Gene name
Locationscaffold_04:99660..101520
Strand-
Gene length (bp)1860
Transcript length (bp)1809
Coding sequence length (bp)1809
Protein length (aa) 603

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00982 Glyco_transf_20 Glycosyltransferase family 20 8.7E-115 180 581

GO

GO Term Description Terminal node
GO:0005992 trehalose biosynthetic process Yes
GO:0003824 catalytic activity Yes
GO:0005984 disaccharide metabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0005991 trehalose metabolic process No
GO:0009311 oligosaccharide metabolic process No
GO:0008152 metabolic process No
GO:0046351 disaccharide biosynthetic process No
GO:0009058 biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0044262 cellular carbohydrate metabolic process No
GO:0071704 organic substance metabolic process No
GO:0016051 carbohydrate biosynthetic process No
GO:0044238 primary metabolic process No
GO:0003674 molecular_function No
GO:0005975 carbohydrate metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0009312 oligosaccharide biosynthetic process No
GO:0008150 biological_process No
GO:0034637 cellular carbohydrate biosynthetic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.607 0.449 0.2822 0.0563 0.2287 0.0404 0.1145 0.1653 0.2298 0.0174

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GT20 1.9E-121 71 582

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 37.59 21.10 54.08
Alive In ants, during behavior modification 21.56 10.08 33.05
Dead In ants, recently dead 15.65 7.53 23.77

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.010537 yes
Alive Dead 0.112675 no
Dead Fungus 0.000238 yes

Orthologs

Orthofinder run ID4
Orthogroup489
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4071
Ophiocordyceps australis map64 (Brazil) OphauB2|7163
Ophiocordyceps camponoti-floridani Ophcf2|03847 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|05929
Ophiocordyceps camponoti-rufipedis Ophun1|3698
Ophiocordyceps camponoti-rufipedis Ophun1|5223
Ophiocordyceps kimflemingae Ophio5|6531
Ophiocordyceps subramaniannii Hirsu2|10969

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03847
MFDAASPHSINASRENKSFEQELNGNAGLYVPVTPEIRRDTYKEKRRPSGYGYFTSKHGVGEQSTGPALSGRVIS
ATFTMPQTLRYNGSGKWEIERHAHRSSLLGSLEYLSSAECSWDHTVIAWTGELTPSPKFRPSSLAALPVTMPTSV
TIEPEFDDTYVPRSDMDLLEKLLWNDRLRTVPIWLADESATSERGVMLGEQARWRAFADHDICALLHYNQYPPTA
GREENERWRHYLRMNTAFADGICSLHKPGDIVMVYDYQLMLVPEMLRRRRPDIFVSFFLASPFPTSELMRCLHRR
EEMLRGILGADLIGLQASHYTQHLANSCERILGLTASSEGISTGRGWVSIGVFPEGIDVASITSLAFTESVDAKC
VELRKLYGNRKLIVGCDPPDSLGGVDKKLKAFSRFLDMYPEWKGKVVLVQTNSKPAVEDVGTEESKYASRVHGLV
HAVNQAYGSLGFMPVRLHSHHLSCDEYMALLRLGDANLVTCARQGMTATGLEYICCQRDGHGLLIISEFSGTACN
LDEALHVNPWDAVGVAEQIHEALTMSSERRREKHGDVYRRLERGDVRAWVEGMVRCLVEAVGGREASEGRRPSCA
GI*
Coding >Ophcf2|03847
ATGTTTGACGCAGCCTCTCCGCATAGCATCAACGCGTCTCGCGAAAATAAGTCCTTTGAGCAGGAGCTCAATGGA
AACGCCGGTCTCTACGTGCCCGTCACGCCAGAGATCCGGCGAGACACGTACAAGGAGAAACGGCGGCCATCGGGC
TACGGTTATTTTACATCCAAGCATGGCGTCGGCGAGCAGAGTACCGGACCGGCACTGAGCGGGAGAGTCATCTCG
GCGACCTTTACCATGCCTCAGACGCTCCGTTACAACGGCTCGGGGAAATGGGAAATCGAACGACATGCTCACCGT
TCCTCGCTACTTGGCTCTCTCGAATACCTTTCCTCGGCAGAGTGCTCGTGGGACCACACCGTCATCGCCTGGACG
GGGGAGCTCACACCAAGTCCCAAGTTTCGACCATCGTCTCTGGCAGCCTTGCCCGTAACAATGCCGACCTCTGTC
ACCATCGAACCCGAATTCGACGATACGTACGTGCCACGCAGTGACATGGATCTTCTAGAGAAGCTCCTCTGGAAC
GACCGGTTGAGAACGGTGCCCATCTGGCTTGCCGACGAGTCCGCCACCTCTGAACGAGGTGTCATGCTCGGCGAA
CAGGCCAGGTGGAGGGCCTTTGCAGACCACGACATCTGCGCCCTCCTGCACTATAATCAGTATCCTCCCACTGCA
GGACGAGAGGAAAACGAGCGATGGCGCCATTACCTGCGCATGAACACGGCGTTTGCGGATGGCATCTGCAGCTTG
CATAAGCCCGGGGACATCGTCATGGTCTACGACTACCAGTTGATGCTCGTCCCGGAAATGCTTCGTCGGCGTCGA
CCGGACATCTTCGTCTCCTTTTTCCTCGCCTCGCCGTTTCCCACGAGCGAGCTGATGCGCTGCTTACACCGACGA
GAAGAGATGCTCAGGGGAATCCTGGGTGCGGATCTGATCGGTCTGCAGGCCTCTCACTACACGCAGCACCTGGCA
AACTCGTGCGAGAGAATCCTCGGCCTCACAGCGTCCAGTGAGGGCATCTCTACGGGACGCGGATGGGTTTCCATC
GGAGTCTTCCCCGAGGGAATCGACGTGGCCAGCATCACGTCCTTGGCCTTTACCGAGTCGGTCGACGCCAAGTGC
GTCGAGCTGAGGAAGCTCTACGGTAACCGGAAGCTCATCGTCGGCTGCGATCCCCCAGATAGCCTGGGAGGCGTC
GACAAGAAGCTCAAGGCCTTCTCCCGCTTCCTCGACATGTATCCCGAGTGGAAGGGCAAAGTGGTACTGGTGCAG
ACCAACAGCAAGCCGGCGGTCGAGGACGTGGGCACCGAGGAATCCAAGTACGCGAGCCGTGTGCACGGGCTTGTC
CACGCCGTCAACCAGGCCTACGGATCGCTGGGCTTCATGCCCGTCAGGCTTCACTCGCACCACCTCTCGTGTGAC
GAGTACATGGCTCTCCTGAGGCTGGGCGACGCCAACCTCGTCACCTGCGCGCGGCAGGGAATGACGGCTACTGGA
CTCGAGTACATCTGCTGCCAGCGGGATGGGCACGGGCTTCTCATCATCTCCGAGTTTAGCGGGACGGCGTGTAAC
TTGGATGAGGCGCTGCATGTGAACCCGTGGGATGCCGTCGGTGTGGCGGAGCAGATTCACGAGGCGCTTACTATG
AGCTCGGAGAGACGAAGGGAGAAGCATGGGGATGTGTATCGTCGTCTTGAGCGGGGGGATGTGAGGGCTTGGGTT
GAGGGCATGGTGAGGTGTCTCGTGGAGGCTGTTGGGGGGAGGGAGGCGTCTGAGGGGAGGCGTCCGAGCTGTGCT
GGAATATGA
Transcript >Ophcf2|03847
ATGTTTGACGCAGCCTCTCCGCATAGCATCAACGCGTCTCGCGAAAATAAGTCCTTTGAGCAGGAGCTCAATGGA
AACGCCGGTCTCTACGTGCCCGTCACGCCAGAGATCCGGCGAGACACGTACAAGGAGAAACGGCGGCCATCGGGC
TACGGTTATTTTACATCCAAGCATGGCGTCGGCGAGCAGAGTACCGGACCGGCACTGAGCGGGAGAGTCATCTCG
GCGACCTTTACCATGCCTCAGACGCTCCGTTACAACGGCTCGGGGAAATGGGAAATCGAACGACATGCTCACCGT
TCCTCGCTACTTGGCTCTCTCGAATACCTTTCCTCGGCAGAGTGCTCGTGGGACCACACCGTCATCGCCTGGACG
GGGGAGCTCACACCAAGTCCCAAGTTTCGACCATCGTCTCTGGCAGCCTTGCCCGTAACAATGCCGACCTCTGTC
ACCATCGAACCCGAATTCGACGATACGTACGTGCCACGCAGTGACATGGATCTTCTAGAGAAGCTCCTCTGGAAC
GACCGGTTGAGAACGGTGCCCATCTGGCTTGCCGACGAGTCCGCCACCTCTGAACGAGGTGTCATGCTCGGCGAA
CAGGCCAGGTGGAGGGCCTTTGCAGACCACGACATCTGCGCCCTCCTGCACTATAATCAGTATCCTCCCACTGCA
GGACGAGAGGAAAACGAGCGATGGCGCCATTACCTGCGCATGAACACGGCGTTTGCGGATGGCATCTGCAGCTTG
CATAAGCCCGGGGACATCGTCATGGTCTACGACTACCAGTTGATGCTCGTCCCGGAAATGCTTCGTCGGCGTCGA
CCGGACATCTTCGTCTCCTTTTTCCTCGCCTCGCCGTTTCCCACGAGCGAGCTGATGCGCTGCTTACACCGACGA
GAAGAGATGCTCAGGGGAATCCTGGGTGCGGATCTGATCGGTCTGCAGGCCTCTCACTACACGCAGCACCTGGCA
AACTCGTGCGAGAGAATCCTCGGCCTCACAGCGTCCAGTGAGGGCATCTCTACGGGACGCGGATGGGTTTCCATC
GGAGTCTTCCCCGAGGGAATCGACGTGGCCAGCATCACGTCCTTGGCCTTTACCGAGTCGGTCGACGCCAAGTGC
GTCGAGCTGAGGAAGCTCTACGGTAACCGGAAGCTCATCGTCGGCTGCGATCCCCCAGATAGCCTGGGAGGCGTC
GACAAGAAGCTCAAGGCCTTCTCCCGCTTCCTCGACATGTATCCCGAGTGGAAGGGCAAAGTGGTACTGGTGCAG
ACCAACAGCAAGCCGGCGGTCGAGGACGTGGGCACCGAGGAATCCAAGTACGCGAGCCGTGTGCACGGGCTTGTC
CACGCCGTCAACCAGGCCTACGGATCGCTGGGCTTCATGCCCGTCAGGCTTCACTCGCACCACCTCTCGTGTGAC
GAGTACATGGCTCTCCTGAGGCTGGGCGACGCCAACCTCGTCACCTGCGCGCGGCAGGGAATGACGGCTACTGGA
CTCGAGTACATCTGCTGCCAGCGGGATGGGCACGGGCTTCTCATCATCTCCGAGTTTAGCGGGACGGCGTGTAAC
TTGGATGAGGCGCTGCATGTGAACCCGTGGGATGCCGTCGGTGTGGCGGAGCAGATTCACGAGGCGCTTACTATG
AGCTCGGAGAGACGAAGGGAGAAGCATGGGGATGTGTATCGTCGTCTTGAGCGGGGGGATGTGAGGGCTTGGGTT
GAGGGCATGGTGAGGTGTCTCGTGGAGGCTGTTGGGGGGAGGGAGGCGTCTGAGGGGAGGCGTCCGAGCTGTGCT
GGAATATGA
Gene >Ophcf2|03847
ATGTTTGACGCAGCCTCTCCGCATAGCATCAACGCGTCTCGCGAAAATAAGTCCTTTGAGCAGGAGCTCAATGGA
AACGCCGGTCTCTACGTGCCCGTCACGCCAGAGATCCGGCGAGACACGTACAAGGAGAAACGGCGGCCATCGGGC
TACGGTTATTTTACATCCAAGCATGGCGTCGGCGAGCAGAGTACCGGACCGGCACTGAGCGGGAGAGTCATCTCG
GCGACCTTTACCATGCCTCAGACGCTCCGTTACAACGGCTCGGGGAAATGGGTGAGGATGATATCCGCTACGGTT
GTGTCCATCTCACTGATTACCTCGAAGGAAATCGAACGACATGCTCACCGTTCCTCGCTACTTGGCTCTCTCGAA
TACCTTTCCTCGGCAGAGTGCTCGTGGGACCACACCGTCATCGCCTGGACGGGGGAGCTCACACCAAGTCCCAAG
TTTCGACCATCGTCTCTGGCAGCCTTGCCCGTAACAATGCCGACCTCTGTCACCATCGAACCCGAATTCGACGAT
ACGTACGTGCCACGCAGTGACATGGATCTTCTAGAGAAGCTCCTCTGGAACGACCGGTTGAGAACGGTGCCCATC
TGGCTTGCCGACGAGTCCGCCACCTCTGAACGAGGTGTCATGCTCGGCGAACAGGCCAGGTGGAGGGCCTTTGCA
GACCACGACATCTGCGCCCTCCTGCACTATAATCAGTATCCTCCCACTGCAGGACGAGAGGAAAACGAGCGATGG
CGCCATTACCTGCGCATGAACACGGCGTTTGCGGATGGCATCTGCAGCTTGCATAAGCCCGGGGACATCGTCATG
GTCTACGACTACCAGTTGATGCTCGTCCCGGAAATGCTTCGTCGGCGTCGACCGGACATCTTCGTCTCCTTTTTC
CTCGCCTCGCCGTTTCCCACGAGCGAGCTGATGCGCTGCTTACACCGACGAGAAGAGATGCTCAGGGGAATCCTG
GGTGCGGATCTGATCGGTCTGCAGGCCTCTCACTACACGCAGCACCTGGCAAACTCGTGCGAGAGAATCCTCGGC
CTCACAGCGTCCAGTGAGGGCATCTCTACGGGACGCGGATGGGTTTCCATCGGAGTCTTCCCCGAGGGAATCGAC
GTGGCCAGCATCACGTCCTTGGCCTTTACCGAGTCGGTCGACGCCAAGTGCGTCGAGCTGAGGAAGCTCTACGGT
AACCGGAAGCTCATCGTCGGCTGCGATCCCCCAGATAGCCTGGGAGGCGTCGACAAGAAGCTCAAGGCCTTCTCC
CGCTTCCTCGACATGTATCCCGAGTGGAAGGGCAAAGTGGTACTGGTGCAGACCAACAGCAAGCCGGCGGTCGAG
GACGTGGGCACCGAGGAATCCAAGTACGCGAGCCGTGTGCACGGGCTTGTCCACGCCGTCAACCAGGCCTACGGA
TCGCTGGGCTTCATGCCCGTCAGGCTTCACTCGCACCACCTCTCGTGTGACGAGTACATGGCTCTCCTGAGGCTG
GGCGACGCCAACCTCGTCACCTGCGCGCGGCAGGGAATGACGGCTACTGGACTCGAGTACATCTGCTGCCAGCGG
GATGGGCACGGGCTTCTCATCATCTCCGAGTTTAGCGGGACGGCGTGTAACTTGGATGAGGCGCTGCATGTGAAC
CCGTGGGATGCCGTCGGTGTGGCGGAGCAGATTCACGAGGCGCTTACTATGAGCTCGGAGAGACGAAGGGAGAAG
CATGGGGATGTGTATCGTCGTCTTGAGCGGGGGGATGTGAGGGCTTGGGTTGAGGGCATGGTGAGGTGTCTCGTG
GAGGCTGTTGGGGGGAGGGAGGCGTCTGAGGGGAGGCGTCCGAGCTGTGCTGGAATATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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