Protein ID | Ophcf2|03832 |
Gene name | |
Location | scaffold_04:62554..64210 |
Strand | + |
Gene length (bp) | 1656 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 68 | 90 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 94.60 | 53.40 | 135.81 |
Alive | In ants, during behavior modification | 65.79 | 36.43 | 95.15 |
Dead | In ants, recently dead | 58.65 | 33.63 | 83.68 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.051741 | no |
Alive | Dead | 0.535316 | no |
Dead | Fungus | 0.007042 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03832 MPFRLLAGRFGPRATGFRLVTPIISFRSSTNQARPSLPFLSAPTATGRPTGRRFISARRQWFRREAKLMIRYTLS IWGCGMAVIFIMWAIEQEKRERRHPTPREWRWSTRQSLLYAHHCAGSDWPDALKAARRVVSRLENPDYDGQDVVK LVGKPDQTLVDPGLLLEDADELLPRDISEKPEEWQRGYFDAIMLAAKAAEHVDGWLFDRLLKVTVPPECVFGPLN PRPRPIRSGVSGVPRVEDCQPAYPSAESWYMKILGTEGFSQRQRVDATLAYASFMQFKNQVEQAEALYDLALAEA TNKVEPARLPYDTKTLVLKDEGEPPSDNMLEVLTAIANFKARKGQLSSALPMYVSLLQARRRLSNTPPPPTSSRP PPSFVDQVTGWFKQPPYPESPGDGTGPPWRNTLERCQEAALHLYIGEILFATSSRTNGLAWTRDAVDIAEEQLRD GSLTKMEKEAKQRCRECLAASLNNWSAMAAQLAEAEQAKNEKSRGKSGLLPFWRVAQEPQEANSRWSSEQAAVEA RADRAKELLNDDLEAQSGGLLSFFRA* |
Coding | >Ophcf2|03832 ATGCCTTTTCGGCTACTCGCCGGCCGATTTGGCCCTCGGGCTACTGGCTTCCGCCTCGTCACTCCGATAATCAGC TTCCGAAGCTCGACAAACCAAGCGCGTCCCTCCCTTCCGTTTCTCTCCGCTCCTACAGCCACTGGCCGTCCAACC GGACGAAGATTCATCTCTGCGCGGAGGCAATGGTTCCGCAGAGAGGCCAAGCTGATGATTCGCTACACGCTCAGT ATCTGGGGTTGCGGAATGGCCGTTATCTTCATCATGTGGGCTATCGAGCAAGAGAAGAGAGAGCGCCGGCATCCG ACGCCGCGAGAGTGGCGTTGGAGCACGAGGCAGTCTCTACTTTATGCTCATCATTGCGCGGGGTCTGATTGGCCC GATGCCCTCAAGGCGGCGAGACGCGTCGTTAGTCGGCTGGAGAACCCCGATTATGATGGTCAGGACGTCGTCAAG CTAGTCGGCAAGCCAGACCAGACACTGGTGGACCCGGGCCTGTTGCTGGAAGATGCGGACGAGCTTCTACCGCGC GATATCTCGGAAAAACCCGAGGAATGGCAGAGGGGCTACTTTGATGCCATCATGCTGGCAGCCAAGGCGGCCGAG CACGTCGATGGATGGCTCTTCGATCGTCTACTTAAAGTCACCGTCCCCCCTGAATGCGTCTTCGGGCCTTTGAAC CCTCGGCCGCGTCCGATTCGGTCTGGAGTCTCGGGTGTCCCGCGAGTGGAAGACTGCCAGCCGGCATATCCCTCG GCCGAGAGCTGGTACATGAAAATACTTGGCACTGAAGGCTTCTCGCAGAGGCAAAGGGTCGATGCCACGCTTGCG TACGCTAGCTTTATGCAGTTCAAGAATCAGGTCGAGCAGGCCGAGGCCTTGTATGATCTGGCCTTGGCTGAGGCT ACCAACAAGGTTGAGCCGGCTCGTCTGCCCTACGACACGAAGACGCTTGTCCTTAAAGACGAAGGCGAGCCGCCA TCGGACAACATGCTCGAGGTCCTCACCGCCATCGCCAACTTCAAGGCCCGCAAAGGCCAACTCTCATCAGCCCTC CCCATGTACGTCTCACTCCTCCAAGCACGCCGCCGTCTCTCGAACACGCCCCCTCCTCCGACGTCGTCTCGCCCA CCTCCGTCCTTTGTCGATCAAGTGACGGGCTGGTTCAAGCAGCCACCCTATCCCGAATCCCCCGGGGACGGCACC GGGCCTCCGTGGCGCAACACCCTCGAGCGCTGTCAAGAAGCGGCGCTGCACCTCTATATCGGCGAGATACTATTC GCCACCTCTTCGCGAACAAATGGCCTGGCGTGGACGCGAGACGCCGTCGATATCGCAGAGGAGCAGCTCCGCGAC GGCAGTCTCACCAAGATGGAAAAGGAAGCAAAGCAGAGATGTCGAGAGTGCCTCGCCGCAAGTCTGAATAACTGG TCGGCCATGGCGGCGCAGTTGGCCGAGGCCGAGCAGGCCAAGAATGAAAAGAGCCGAGGCAAATCTGGACTGTTG CCCTTTTGGCGCGTAGCGCAGGAGCCACAGGAAGCGAACAGTCGCTGGAGTAGCGAGCAGGCTGCGGTGGAGGCG CGGGCGGATAGGGCGAAGGAGCTGTTGAATGATGATTTGGAGGCACAGTCGGGGGGACTTCTTTCTTTCTTCAGG GCCTGA |
Transcript | >Ophcf2|03832 ATGCCTTTTCGGCTACTCGCCGGCCGATTTGGCCCTCGGGCTACTGGCTTCCGCCTCGTCACTCCGATAATCAGC TTCCGAAGCTCGACAAACCAAGCGCGTCCCTCCCTTCCGTTTCTCTCCGCTCCTACAGCCACTGGCCGTCCAACC GGACGAAGATTCATCTCTGCGCGGAGGCAATGGTTCCGCAGAGAGGCCAAGCTGATGATTCGCTACACGCTCAGT ATCTGGGGTTGCGGAATGGCCGTTATCTTCATCATGTGGGCTATCGAGCAAGAGAAGAGAGAGCGCCGGCATCCG ACGCCGCGAGAGTGGCGTTGGAGCACGAGGCAGTCTCTACTTTATGCTCATCATTGCGCGGGGTCTGATTGGCCC GATGCCCTCAAGGCGGCGAGACGCGTCGTTAGTCGGCTGGAGAACCCCGATTATGATGGTCAGGACGTCGTCAAG CTAGTCGGCAAGCCAGACCAGACACTGGTGGACCCGGGCCTGTTGCTGGAAGATGCGGACGAGCTTCTACCGCGC GATATCTCGGAAAAACCCGAGGAATGGCAGAGGGGCTACTTTGATGCCATCATGCTGGCAGCCAAGGCGGCCGAG CACGTCGATGGATGGCTCTTCGATCGTCTACTTAAAGTCACCGTCCCCCCTGAATGCGTCTTCGGGCCTTTGAAC CCTCGGCCGCGTCCGATTCGGTCTGGAGTCTCGGGTGTCCCGCGAGTGGAAGACTGCCAGCCGGCATATCCCTCG GCCGAGAGCTGGTACATGAAAATACTTGGCACTGAAGGCTTCTCGCAGAGGCAAAGGGTCGATGCCACGCTTGCG TACGCTAGCTTTATGCAGTTCAAGAATCAGGTCGAGCAGGCCGAGGCCTTGTATGATCTGGCCTTGGCTGAGGCT ACCAACAAGGTTGAGCCGGCTCGTCTGCCCTACGACACGAAGACGCTTGTCCTTAAAGACGAAGGCGAGCCGCCA TCGGACAACATGCTCGAGGTCCTCACCGCCATCGCCAACTTCAAGGCCCGCAAAGGCCAACTCTCATCAGCCCTC CCCATGTACGTCTCACTCCTCCAAGCACGCCGCCGTCTCTCGAACACGCCCCCTCCTCCGACGTCGTCTCGCCCA CCTCCGTCCTTTGTCGATCAAGTGACGGGCTGGTTCAAGCAGCCACCCTATCCCGAATCCCCCGGGGACGGCACC GGGCCTCCGTGGCGCAACACCCTCGAGCGCTGTCAAGAAGCGGCGCTGCACCTCTATATCGGCGAGATACTATTC GCCACCTCTTCGCGAACAAATGGCCTGGCGTGGACGCGAGACGCCGTCGATATCGCAGAGGAGCAGCTCCGCGAC GGCAGTCTCACCAAGATGGAAAAGGAAGCAAAGCAGAGATGTCGAGAGTGCCTCGCCGCAAGTCTGAATAACTGG TCGGCCATGGCGGCGCAGTTGGCCGAGGCCGAGCAGGCCAAGAATGAAAAGAGCCGAGGCAAATCTGGACTGTTG CCCTTTTGGCGCGTAGCGCAGGAGCCACAGGAAGCGAACAGTCGCTGGAGTAGCGAGCAGGCTGCGGTGGAGGCG CGGGCGGATAGGGCGAAGGAGCTGTTGAATGATGATTTGGAGGCACAGTCGGGGGGACTTCTTTCTTTCTTCAGG GCCTGA |
Gene | >Ophcf2|03832 ATGCCTTTTCGGCTACTCGCCGGCCGATTTGGCCCTCGGGCTACTGGCTTCCGCCTCGTCACTCCGATAATCAGC TTCCGAAGCTCGACAAACCAAGCGCGTCCCTCCCTTCCGTTTCTCTCCGCTCCTACAGCCACTGGCCGTCCAACC GGACGAAGATTCATCTCTGCGCGGAGGCAATGGTTCCGCAGAGAGGCCAAGCTGATGATTCGCTACACGCTCAGT ATCTGGGGTTGCGGAATGGCCGTTATCTTCATCATGTGGGCTATCGAGCAAGAGAAGAGAGAGCGCCGGCATCCG ACGCCGCGAGAGTGGCGTTGGAGCACGAGGCAGTCTCTACTTTATGCTCATCATTGCGCGGGGTCTGATTGGCCC GATGCCCTCAAGGCGGCGAGACGCGTCGTTAGTCGGCTGGAGAACCCCGATTATGATGGTCAGGACGTCGTCAAG CTAGTCGGCAAGCCAGACCAGACACTGGTGGACCCGGGCCTGTTGCTGGAAGATGCGGACGAGCTTCTACCGCGC GATATCTCGGAAAAACCCGAGGAATGGCAGAGGGGCTACTTTGATGCCATCATGCTGGCAGCCAAGGCGGCCGAG CACGTCGATGGATGGCTCTTCGATCGTCTACTTAAAGTCACCGTCCCCCCTGAATGCGTCTTCGGGCCTTTGAAC CCTCGGCCGCGTCCGATTCGGTCTGGAGTCTCGGGTGTCCCGCGAGTGGAAGACTGCCAGCCGGCATATCCCTCG GCCGAGAGCTGGTACATGAAAATACTTGGCACTGAAGGCTTCTCGCAGAGGCAAAGGGTCGATGCCACGCTTGCG TACGCTAGCTTTATGCAGTTCAAGAATCAGGTCGAGCAGGCCGAGGCCTTGTATGATCTGGCCTTGGCTGAGGCT ACCAACAAGGTTGAGCCGGCTCGTCTGCCCTACGACACGAAGACGCTTGTCCTTAAAGACGAAGGCGAGCCGCCA TCGGACAACATGCTCGAGGTCCTCACCGCCATCGCCAACTTCAAGGCCCGCAAAGGCCAACTCTCATCAGCCCTC CCCATGTACGTCTCACTCCTCCAAGCACGCCGCCGTCTCTCGAACACGCCCCCTCCTCCGACGTCGTCTCGCCCA CCTCCGTCCTTTGTCGATCAAGTGACGGGCTGGTTCAAGCAGCCACCCTATCCCGAATCCCCCGGGGACGGCACC GGGCCTCCGTGGCGCAACACCCTCGAGCGCTGTCAAGAAGCGGCGCTGCACCTCTATATCGGCGAGATACTATTC GCCACCTCTTCGCGAACAAATGGCCTGGCGTGGACGCGAGACGCCGTCGATATCGCAGAGGAGCAGCTCCGCGAC GGCAGTCTCACCAAGATGGAAAAGGAAGCAAAGCAGAGATGTCGAGAGTGCCTCGCCGCAAGTCTGAATAACTGG TCGGCCATGGCGGCGCAGTTGGCCGAGGCCGAGCAGGCCAAGAATGAAAAGAGCCGAGGCAAATCTGGACTGTTG CCCTTTTGGCGCGTAGCGCAGGAGCCACAGGAAGCGAACAGTCGCTGGAGTAGCGAGCAGGCTGCGGTGGAGGCG CGGGCGGATAGGGCGAAGGAGCTGTTGAATGATGATTTGGAGGCACAGTCGGGGGGACTTCTTTCTTTCTTCAGG GCCTGA |