Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03829
Gene name
Locationscaffold_04:56906..57833
Strand-
Gene length (bp)927
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 4.1E-45 39 252

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 35 57 22
2 84 106 22
3 121 140 19
4 214 231 17
5 241 258 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03829
MGNKSVPDSEAEGAPLKQRRGFVGTILEDLDVRLAYLPLLVCCFVSGLTDGTIYNAYGTFVSMQTGNTIFVALGT
SGQNNKPYGWARSLCSIVFFVLGSFTFARLYHLLGGRRRGTLTLSFVTQALIVLVAAAMVQSGVVDGRYPSKRSP
SDVDFKELLIIALLSFQAAGQLVSSRSLGVGEVPTVVVTSMLSDLVSDRALFSLAANEKRTRRFWAFVLTLVGGV
CGGWISKAVHAVSPSLWTVAGIKFLLAGVWALWKADGG*
Coding >Ophcf2|03829
ATGGGGAACAAGTCTGTTCCGGACTCGGAGGCTGAGGGGGCGCCGCTGAAGCAGAGGCGTGGCTTCGTGGGTACG
ATTCTTGAGGATCTCGATGTTCGGTTGGCGTATTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGCTTGACGGAC
GGGACGATTTACAATGCTTATGGGACGTTTGTGTCGATGCAGACTGGAAACACCATCTTTGTCGCGCTGGGCACA
TCAGGGCAGAACAACAAGCCCTACGGCTGGGCCCGCTCTCTCTGCTCAATCGTCTTCTTTGTCCTCGGCTCCTTT
ACCTTTGCACGTCTCTATCACCTTCTAGGCGGCAGAAGACGAGGTACCCTGACGCTCTCCTTCGTCACACAAGCC
CTCATCGTACTCGTCGCCGCCGCCATGGTCCAATCAGGCGTCGTAGACGGTAGGTACCCATCCAAGCGGTCGCCC
TCGGATGTCGACTTCAAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAAGCGGCCGGGCAGCTCGTCAGCAGC
CGTAGCCTGGGCGTGGGCGAGGTGCCAACGGTGGTGGTGACGAGCATGCTGTCTGATTTGGTGTCAGACCGGGCG
CTATTTTCGCTGGCGGCTAATGAGAAGCGAACTCGTCGTTTTTGGGCTTTTGTACTTACTCTTGTTGGGGGTGTT
TGCGGTGGTTGGATCTCCAAGGCTGTTCATGCCGTTTCTCCTTCTTTGTGGACGGTGGCGGGTATCAAGTTCCTG
TTGGCGGGAGTTTGGGCGCTGTGGAAGGCGGATGGGGGATGA
Transcript >Ophcf2|03829
ATGGGGAACAAGTCTGTTCCGGACTCGGAGGCTGAGGGGGCGCCGCTGAAGCAGAGGCGTGGCTTCGTGGGTACG
ATTCTTGAGGATCTCGATGTTCGGTTGGCGTATTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGCTTGACGGAC
GGGACGATTTACAATGCTTATGGGACGTTTGTGTCGATGCAGACTGGAAACACCATCTTTGTCGCGCTGGGCACA
TCAGGGCAGAACAACAAGCCCTACGGCTGGGCCCGCTCTCTCTGCTCAATCGTCTTCTTTGTCCTCGGCTCCTTT
ACCTTTGCACGTCTCTATCACCTTCTAGGCGGCAGAAGACGAGGTACCCTGACGCTCTCCTTCGTCACACAAGCC
CTCATCGTACTCGTCGCCGCCGCCATGGTCCAATCAGGCGTCGTAGACGGTAGGTACCCATCCAAGCGGTCGCCC
TCGGATGTCGACTTCAAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAAGCGGCCGGGCAGCTCGTCAGCAGC
CGTAGCCTGGGCGTGGGCGAGGTGCCAACGGTGGTGGTGACGAGCATGCTGTCTGATTTGGTGTCAGACCGGGCG
CTATTTTCGCTGGCGGCTAATGAGAAGCGAACTCGTCGTTTTTGGGCTTTTGTACTTACTCTTGTTGGGGGTGTT
TGCGGTGGTTGGATCTCCAAGGCTGTTCATGCCGTTTCTCCTTCTTTGTGGACGGTGGCGGGTATCAAGTTCCTG
TTGGCGGGAGTTTGGGCGCTGTGGAAGGCGGATGGGGGATGA
Gene >Ophcf2|03829
ATGGGGAACAAGTCTGTTCCGGACTCGGAGGCTGAGGGGGCGCCGCTGAAGCAGAGGCGTGGCTTCGTGGGTACG
ATTCTTGAGGATCTCGATGTTCGGTTGGCGTATTTGCCGCTGCTGGTCTGTTGCTTCGTCTCTGGCTTGACGGAC
GGGACGATTTACAATGGTGAGATGCGTGCCTTCTCCTCTCCCACCCTCCTTCATACCCTCCGAGTCGAGACTATA
ACGAAGTCTTGGCAGCTTATGGGACGTTTGTGTCGATGCAGACTGGTAAGTTGTTCTCTTGGCTGCAGCATCAAA
GCAGTCGAGACTCATGCCGCGTGGCATTTAGGAAACACCATCTTTGTCGCGCTGGGCACATCAGGGCAGAACAAC
AAGCCCTACGGCTGGGCCCGCTCTCTCTGCTCAATCGTCTTCTTTGTCCTCGGCTCCTTTACCTTTGCACGTCTC
TATCACCTTCTAGGCGGCAGAAGACGAGGTACCCTGACGCTCTCCTTCGTCACACAAGCCCTCATCGTACTCGTC
GCCGCCGCCATGGTCCAATCAGGCGTCGTAGACGGTAGGTACCCATCCAAGCGGTCGCCCTCGGATGTCGACTTC
AAGGAGCTCCTCATCATCGCGCTGCTGAGCTTCCAAGCGGCCGGGCAGCTCGTCAGCAGCCGTAGCCTGGGCGTG
GGCGAGGTGCCAACGGTGGTGGTGACGAGCATGCTGTCTGATTTGGTGTCAGACCGGGCGCTATTTTCGCTGGCG
GCTAATGAGAAGCGAACTCGTCGTTTTTGGGCTTTTGTACTTACTCTTGTTGGGGGTGTTTGCGGTGGTTGGATC
TCCAAGGCTGTTCATGCCGTTTCTCCTTCTTTGTGGACGGTGGCGGGTATCAAGTTCCTGTTGGCGGGAGTTTGG
GCGCTGTGGAAGGCGGATGGGGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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