Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03818
Gene name
Locationscaffold_04:22789..23716
Strand+
Gene length (bp)927
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03818
MCRTVQILSLLLLLVSASFPASLSAPRILTARQLTYSCGPMRQPQGFHFWHIDTCLNDVRKKKKIYKFQMCNPHV
SAGIMAYALPQGLHDMLWREFKIDNLTIIKHIVQSLEMVPIETSIGRAVWIRQSAKRQRIVCWPDQPDFTNEDFQ
EFGGALAALLVHPPDAASNATGLRRRFMKFPPGFLARNRVHYIYKASYNYHKIWALHGNWRHYGLFGVSYYASRQ
WMIDEFDTWGGRVGRLLLASMRKAYECDYHGGCVTKPNWGEAFQPKSHQSVIDLWLYSVSNRSPLAITFGDVETP
PNTLWLSL*
Coding >Ophcf2|03818
ATGTGTCGTACGGTGCAGATCCTCTCCCTCCTGCTGTTACTTGTCTCCGCCAGCTTTCCAGCCAGCCTGTCGGCA
CCGCGCATCTTGACGGCCCGACAACTCACCTACTCGTGTGGCCCCATGCGTCAACCGCAAGGCTTCCACTTCTGG
CACATCGACACCTGTCTCAATGACGTTAGAAAGAAGAAGAAGATCTATAAGTTTCAAATGTGCAATCCCCACGTC
TCAGCCGGCATCATGGCCTACGCCCTCCCACAAGGCCTTCACGACATGTTGTGGCGCGAGTTCAAGATCGACAAC
TTGACCATTATAAAACACATCGTTCAGTCCCTGGAGATGGTGCCCATTGAAACCAGTATCGGGCGAGCCGTCTGG
ATCCGGCAGTCGGCGAAGCGCCAGAGAATAGTCTGTTGGCCCGACCAGCCTGATTTCACCAACGAGGATTTCCAA
GAATTCGGCGGCGCCCTTGCCGCCCTCCTCGTCCATCCACCGGATGCCGCCAGTAATGCAACAGGTCTGCGCCGC
CGTTTCATGAAGTTTCCGCCCGGCTTCCTCGCCCGGAATCGAGTTCACTACATCTACAAGGCGTCTTACAACTAC
CACAAGATCTGGGCCCTACACGGAAATTGGCGACACTATGGCCTCTTCGGCGTCTCGTACTACGCCTCACGTCAG
TGGATGATCGACGAGTTCGACACCTGGGGCGGCCGCGTCGGCAGACTGTTACTGGCCTCCATGCGCAAGGCCTAC
GAATGCGATTATCACGGAGGCTGTGTGACCAAGCCGAACTGGGGCGAGGCCTTCCAACCAAAAAGCCACCAAAGT
GTCATCGATTTGTGGCTATACAGCGTTTCCAATCGTTCGCCGCTGGCCATCACTTTTGGCGACGTCGAGACGCCC
CCAAACACCCTATGGCTGAGCCTGTGA
Transcript >Ophcf2|03818
ATGTGTCGTACGGTGCAGATCCTCTCCCTCCTGCTGTTACTTGTCTCCGCCAGCTTTCCAGCCAGCCTGTCGGCA
CCGCGCATCTTGACGGCCCGACAACTCACCTACTCGTGTGGCCCCATGCGTCAACCGCAAGGCTTCCACTTCTGG
CACATCGACACCTGTCTCAATGACGTTAGAAAGAAGAAGAAGATCTATAAGTTTCAAATGTGCAATCCCCACGTC
TCAGCCGGCATCATGGCCTACGCCCTCCCACAAGGCCTTCACGACATGTTGTGGCGCGAGTTCAAGATCGACAAC
TTGACCATTATAAAACACATCGTTCAGTCCCTGGAGATGGTGCCCATTGAAACCAGTATCGGGCGAGCCGTCTGG
ATCCGGCAGTCGGCGAAGCGCCAGAGAATAGTCTGTTGGCCCGACCAGCCTGATTTCACCAACGAGGATTTCCAA
GAATTCGGCGGCGCCCTTGCCGCCCTCCTCGTCCATCCACCGGATGCCGCCAGTAATGCAACAGGTCTGCGCCGC
CGTTTCATGAAGTTTCCGCCCGGCTTCCTCGCCCGGAATCGAGTTCACTACATCTACAAGGCGTCTTACAACTAC
CACAAGATCTGGGCCCTACACGGAAATTGGCGACACTATGGCCTCTTCGGCGTCTCGTACTACGCCTCACGTCAG
TGGATGATCGACGAGTTCGACACCTGGGGCGGCCGCGTCGGCAGACTGTTACTGGCCTCCATGCGCAAGGCCTAC
GAATGCGATTATCACGGAGGCTGTGTGACCAAGCCGAACTGGGGCGAGGCCTTCCAACCAAAAAGCCACCAAAGT
GTCATCGATTTGTGGCTATACAGCGTTTCCAATCGTTCGCCGCTGGCCATCACTTTTGGCGACGTCGAGACGCCC
CCAAACACCCTATGGCTGAGCCTGTGA
Gene >Ophcf2|03818
ATGTGTCGTACGGTGCAGATCCTCTCCCTCCTGCTGTTACTTGTCTCCGCCAGCTTTCCAGCCAGCCTGTCGGCA
CCGCGCATCTTGACGGCCCGACAACTCACCTACTCGTGTGGCCCCATGCGTCAACCGCAAGGCTTCCACTTCTGG
CACATCGACACCTGTCTCAATGACGTTAGAAAGAAGAAGAAGATCTATAAGTTTCAAATGTGCAATCCCCACGTC
TCAGCCGGCATCATGGCCTACGCCCTCCCACAAGGCCTTCACGACATGTTGTGGCGCGAGTTCAAGATCGACAAC
TTGACCATTATAAAACACATCGTTCAGTCCCTGGAGATGGTGCCCATTGAAACCAGTATCGGGCGAGCCGTCTGG
ATCCGGCAGTCGGCGAAGCGCCAGAGAATAGTCTGTTGGCCCGACCAGCCTGATTTCACCAACGAGGATTTCCAA
GAATTCGGCGGCGCCCTTGCCGCCCTCCTCGTCCATCCACCGGATGCCGCCAGTAATGCAACAGGTCTGCGCCGC
CGTTTCATGAAGTTTCCGCCCGGCTTCCTCGCCCGGAATCGAGTTCACTACATCTACAAGGCGTCTTACAACTAC
CACAAGATCTGGGCCCTACACGGAAATTGGCGACACTATGGCCTCTTCGGCGTCTCGTACTACGCCTCACGTCAG
TGGATGATCGACGAGTTCGACACCTGGGGCGGCCGCGTCGGCAGACTGTTACTGGCCTCCATGCGCAAGGCCTAC
GAATGCGATTATCACGGAGGCTGTGTGACCAAGCCGAACTGGGGCGAGGCCTTCCAACCAAAAAGCCACCAAAGT
GTCATCGATTTGTGGCTATACAGCGTTTCCAATCGTTCGCCGCTGGCCATCACTTTTGGCGACGTCGAGACGCCC
CCAAACACCCTATGGCTGAGCCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail