Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03790
Gene name
Locationscaffold_03:3841833..3843027
Strand-
Gene length (bp)1194
Transcript length (bp)1194
Coding sequence length (bp)1194
Protein length (aa) 398

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 7.4E-53 39 381

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03790
MMNRIFSLAGLVLATAGVTLGAEPIIYGYLEAPNIDLKADYSKYNHIGLVFGVVNEDATFTFKNETGINDLVNKV
HEKSGKVLAGLGGSGGSDNFSSIVADEKLRNDFSQHISDYIREMNLDGVDLDWVYVGRDISGCATVDVANDGKNY
LSFVEGLRKKLDDDFGPRKKLIAMGVRVFPFEGPDGPMKDMSEFAKVVDFANLFSWDLNGPWDNTTGPLAPLDLP
RGQGEQISSTSAIDAWVDAKWPANQLTIGIPLYGRSTQALENMLLDRENQYQPISHDAPVGDADDEPRRSPCTGK
TSTTGMWKWSNLVKQGVLKSPLEAEEPWVRQVDERTKTPWLFNRDTKVFLSMDDPDSVKAKIEVAKKRGLAGVNA
FTIDQDTGNQDMTNAIVEAWKK*
Coding >Ophcf2|03790
ATGATGAACCGCATCTTTTCTCTGGCCGGTCTGGTACTGGCAACAGCCGGCGTTACCCTCGGCGCCGAGCCCATC
ATCTACGGCTATCTCGAAGCTCCTAACATCGATCTCAAAGCCGACTACTCAAAGTACAACCACATCGGCCTCGTC
TTCGGCGTCGTCAACGAGGACGCAACCTTTACCTTTAAGAATGAAACCGGTATCAACGACCTGGTTAACAAGGTG
CATGAAAAGAGCGGCAAAGTGCTGGCCGGACTGGGCGGATCTGGAGGCTCAGACAACTTTTCCAGCATCGTGGCC
GATGAAAAGCTACGCAATGACTTTTCCCAGCACATCTCTGACTACATCCGCGAGATGAACCTCGACGGCGTCGAC
CTTGACTGGGTCTATGTCGGGAGGGATATCAGCGGGTGTGCTACGGTAGATGTGGCCAATGATGGGAAGAACTAC
CTTAGTTTCGTTGAGGGTCTGCGCAAGAAGCTTGACGATGACTTTGGCCCTCGCAAGAAGCTCATCGCCATGGGA
GTCCGCGTCTTCCCTTTCGAAGGGCCCGACGGACCGATGAAGGACATGTCCGAGTTTGCCAAAGTCGTTGACTTT
GCTAACCTATTCTCATGGGATCTCAACGGGCCATGGGACAATACCACCGGCCCCCTCGCACCACTCGACCTTCCA
AGAGGGCAAGGGGAGCAAATATCATCCACATCCGCCATAGACGCCTGGGTCGACGCAAAATGGCCAGCCAACCAG
CTCACCATCGGCATCCCCCTGTACGGCCGCTCGACGCAGGCACTCGAGAACATGCTCCTCGATCGGGAGAACCAG
TACCAGCCCATCTCTCATGACGCGCCGGTTGGCGACGCAGACGACGAGCCGAGGCGGAGTCCCTGTACGGGCAAG
ACGTCCACGACCGGCATGTGGAAATGGAGCAACCTCGTCAAGCAGGGGGTTTTGAAGAGTCCCCTGGAGGCTGAG
GAGCCTTGGGTTAGGCAGGTTGATGAGCGGACCAAGACTCCGTGGTTGTTTAACAGAGATACGAAGGTGTTTTTG
TCGATGGATGATCCGGACAGTGTCAAGGCCAAGATTGAGGTCGCCAAGAAGAGGGGGTTGGCGGGCGTGAATGCT
TTTACTATCGATCAGGATACTGGGAACCAGGATATGACCAACGCTATTGTTGAGGCGTGGAAGAAATGA
Transcript >Ophcf2|03790
ATGATGAACCGCATCTTTTCTCTGGCCGGTCTGGTACTGGCAACAGCCGGCGTTACCCTCGGCGCCGAGCCCATC
ATCTACGGCTATCTCGAAGCTCCTAACATCGATCTCAAAGCCGACTACTCAAAGTACAACCACATCGGCCTCGTC
TTCGGCGTCGTCAACGAGGACGCAACCTTTACCTTTAAGAATGAAACCGGTATCAACGACCTGGTTAACAAGGTG
CATGAAAAGAGCGGCAAAGTGCTGGCCGGACTGGGCGGATCTGGAGGCTCAGACAACTTTTCCAGCATCGTGGCC
GATGAAAAGCTACGCAATGACTTTTCCCAGCACATCTCTGACTACATCCGCGAGATGAACCTCGACGGCGTCGAC
CTTGACTGGGTCTATGTCGGGAGGGATATCAGCGGGTGTGCTACGGTAGATGTGGCCAATGATGGGAAGAACTAC
CTTAGTTTCGTTGAGGGTCTGCGCAAGAAGCTTGACGATGACTTTGGCCCTCGCAAGAAGCTCATCGCCATGGGA
GTCCGCGTCTTCCCTTTCGAAGGGCCCGACGGACCGATGAAGGACATGTCCGAGTTTGCCAAAGTCGTTGACTTT
GCTAACCTATTCTCATGGGATCTCAACGGGCCATGGGACAATACCACCGGCCCCCTCGCACCACTCGACCTTCCA
AGAGGGCAAGGGGAGCAAATATCATCCACATCCGCCATAGACGCCTGGGTCGACGCAAAATGGCCAGCCAACCAG
CTCACCATCGGCATCCCCCTGTACGGCCGCTCGACGCAGGCACTCGAGAACATGCTCCTCGATCGGGAGAACCAG
TACCAGCCCATCTCTCATGACGCGCCGGTTGGCGACGCAGACGACGAGCCGAGGCGGAGTCCCTGTACGGGCAAG
ACGTCCACGACCGGCATGTGGAAATGGAGCAACCTCGTCAAGCAGGGGGTTTTGAAGAGTCCCCTGGAGGCTGAG
GAGCCTTGGGTTAGGCAGGTTGATGAGCGGACCAAGACTCCGTGGTTGTTTAACAGAGATACGAAGGTGTTTTTG
TCGATGGATGATCCGGACAGTGTCAAGGCCAAGATTGAGGTCGCCAAGAAGAGGGGGTTGGCGGGCGTGAATGCT
TTTACTATCGATCAGGATACTGGGAACCAGGATATGACCAACGCTATTGTTGAGGCGTGGAAGAAATGA
Gene >Ophcf2|03790
ATGATGAACCGCATCTTTTCTCTGGCCGGTCTGGTACTGGCAACAGCCGGCGTTACCCTCGGCGCCGAGCCCATC
ATCTACGGCTATCTCGAAGCTCCTAACATCGATCTCAAAGCCGACTACTCAAAGTACAACCACATCGGCCTCGTC
TTCGGCGTCGTCAACGAGGACGCAACCTTTACCTTTAAGAATGAAACCGGTATCAACGACCTGGTTAACAAGGTG
CATGAAAAGAGCGGCAAAGTGCTGGCCGGACTGGGCGGATCTGGAGGCTCAGACAACTTTTCCAGCATCGTGGCC
GATGAAAAGCTACGCAATGACTTTTCCCAGCACATCTCTGACTACATCCGCGAGATGAACCTCGACGGCGTCGAC
CTTGACTGGGTCTATGTCGGGAGGGATATCAGCGGGTGTGCTACGGTAGATGTGGCCAATGATGGGAAGAACTAC
CTTAGTTTCGTTGAGGGTCTGCGCAAGAAGCTTGACGATGACTTTGGCCCTCGCAAGAAGCTCATCGCCATGGGA
GTCCGCGTCTTCCCTTTCGAAGGGCCCGACGGACCGATGAAGGACATGTCCGAGTTTGCCAAAGTCGTTGACTTT
GCTAACCTATTCTCATGGGATCTCAACGGGCCATGGGACAATACCACCGGCCCCCTCGCACCACTCGACCTTCCA
AGAGGGCAAGGGGAGCAAATATCATCCACATCCGCCATAGACGCCTGGGTCGACGCAAAATGGCCAGCCAACCAG
CTCACCATCGGCATCCCCCTGTACGGCCGCTCGACGCAGGCACTCGAGAACATGCTCCTCGATCGGGAGAACCAG
TACCAGCCCATCTCTCATGACGCGCCGGTTGGCGACGCAGACGACGAGCCGAGGCGGAGTCCCTGTACGGGCAAG
ACGTCCACGACCGGCATGTGGAAATGGAGCAACCTCGTCAAGCAGGGGGTTTTGAAGAGTCCCCTGGAGGCTGAG
GAGCCTTGGGTTAGGCAGGTTGATGAGCGGACCAAGACTCCGTGGTTGTTTAACAGAGATACGAAGGTGTTTTTG
TCGATGGATGATCCGGACAGTGTCAAGGCCAAGATTGAGGTCGCCAAGAAGAGGGGGTTGGCGGGCGTGAATGCT
TTTACTATCGATCAGGATACTGGGAACCAGGATATGACCAACGCTATTGTTGAGGCGTGGAAGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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