Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03789
Gene name
Locationscaffold_03:3838266..3839414
Strand-
Gene length (bp)1148
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09320 DUF1977 Domain of unknown function (DUF1977) 3.8E-27 247 351
PF00226 DnaJ DnaJ domain 2.3E-19 49 112

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03789
MPSATASGASTGDSSARSREHKQGNQGRTYTAEQKEAVLRIRRCNATAFYDILNLESVRTSCTESDIKKAYRKLS
LLTHPDKNGHEHADEAFKMVSRAFGILGDKEKRDKYDRFGTDPDSRFASAQAQNPFAGFASRQASAGARGGGMGR
GGGWEDELSPEEMFARFFGGGGGGPFGAFDTGPQFVFNFGGGPGIRVHQFGGARPRRRPRDAEPGDAQQQAGNLQ
NLLGLLPIFIFFVLPLLSSLFSGSSSPQTPHMVYDYPDHPYTQGRVTPNLRVNYFVNPSEVTSWSSSKLNQLDRT
AEVNLIRRLRLECDNEITFKQQMRQDAVGWFYQDADKMAQADAFEMPACERMRSLGISR*
Coding >Ophcf2|03789
ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT
CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC
GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC
CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC
ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC
CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT
GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG
TTTGGAGCTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTC
GGCGGCGCGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAG
AACCTCCTAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCG
TCGCCGCAAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTC
AGAGTCAACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACG
GCCGAGGTCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAG
GATGCCGTTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAG
AGGATGAGGTCTTTGGGCATCAGCAGGTGA
Transcript >Ophcf2|03789
ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT
CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC
GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC
CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC
ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC
CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT
GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG
TTTGGAGCTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTC
GGCGGCGCGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAG
AACCTCCTAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCG
TCGCCGCAAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTC
AGAGTCAACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACG
GCCGAGGTCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAG
GATGCCGTTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAG
AGGATGAGGTCTTTGGGCATCAGCAGGTGA
Gene >Ophcf2|03789
ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT
CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC
GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC
CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC
ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC
CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT
GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG
TTTGGAGGTGAGGTGGAGACGACAGGATCTCCTTGTTTCCGAGCGGGAAGGCTGACTCGAGTCACGTTTGTGCAG
CTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTCGGCGGCG
CGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAGAACCTCC
TAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCGTCGCCGC
AAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTCAGAGTCA
ACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACGGCCGAGG
TCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAGGATGCCG
TTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAGAGGATGA
GGTCTTTGGGCATCAGCAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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