Protein ID | Ophcf2|03789 |
Gene name | |
Location | scaffold_03:3838266..3839414 |
Strand | - |
Gene length (bp) | 1148 |
Transcript length (bp) | 1080 |
Coding sequence length (bp) | 1080 |
Protein length (aa) | 360 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09320 | DUF1977 | Domain of unknown function (DUF1977) | 3.8E-27 | 247 | 351 |
PF00226 | DnaJ | DnaJ domain | 2.3E-19 | 49 | 112 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03789 MPSATASGASTGDSSARSREHKQGNQGRTYTAEQKEAVLRIRRCNATAFYDILNLESVRTSCTESDIKKAYRKLS LLTHPDKNGHEHADEAFKMVSRAFGILGDKEKRDKYDRFGTDPDSRFASAQAQNPFAGFASRQASAGARGGGMGR GGGWEDELSPEEMFARFFGGGGGGPFGAFDTGPQFVFNFGGGPGIRVHQFGGARPRRRPRDAEPGDAQQQAGNLQ NLLGLLPIFIFFVLPLLSSLFSGSSSPQTPHMVYDYPDHPYTQGRVTPNLRVNYFVNPSEVTSWSSSKLNQLDRT AEVNLIRRLRLECDNEITFKQQMRQDAVGWFYQDADKMAQADAFEMPACERMRSLGISR* |
Coding | >Ophcf2|03789 ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG TTTGGAGCTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTC GGCGGCGCGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAG AACCTCCTAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCG TCGCCGCAAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTC AGAGTCAACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACG GCCGAGGTCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAG GATGCCGTTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAG AGGATGAGGTCTTTGGGCATCAGCAGGTGA |
Transcript | >Ophcf2|03789 ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG TTTGGAGCTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTC GGCGGCGCGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAG AACCTCCTAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCG TCGCCGCAAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTC AGAGTCAACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACG GCCGAGGTCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAG GATGCCGTTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAG AGGATGAGGTCTTTGGGCATCAGCAGGTGA |
Gene | >Ophcf2|03789 ATGCCGAGCGCCACAGCATCGGGCGCCAGTACGGGCGACTCATCCGCTCGCTCGCGCGAACACAAGCAGGGCAAT CAGGGGCGCACGTACACGGCGGAGCAGAAGGAAGCGGTGCTGCGCATTCGGAGGTGCAACGCGACCGCCTTTTAC GACATCCTCAACCTCGAGAGCGTCAGGACATCCTGTACCGAGTCGGACATCAAAAAGGCCTACCGGAAACTGTCC CTGCTGACGCACCCCGACAAAAATGGCCACGAACACGCTGACGAGGCCTTCAAGATGGTCAGTCGCGCCTTTGGC ATCCTGGGCGACAAGGAGAAGCGCGACAAGTACGACAGGTTCGGCACCGACCCGGACAGCAGGTTCGCCAGCGCC CAGGCTCAGAACCCCTTTGCCGGCTTCGCCTCTCGACAGGCCTCGGCCGGTGCACGAGGCGGCGGCATGGGTCGT GGGGGCGGGTGGGAGGACGAGCTGAGTCCCGAGGAGATGTTTGCCCGCTTCTTTGGCGGCGGCGGCGGCGGCCCG TTTGGAGGTGAGGTGGAGACGACAGGATCTCCTTGTTTCCGAGCGGGAAGGCTGACTCGAGTCACGTTTGTGCAG CTTTCGATACGGGCCCGCAGTTTGTTTTCAACTTTGGCGGCGGCCCGGGCATTCGCGTTCACCAATTCGGCGGCG CGCGGCCTCGGCGGCGACCGCGCGATGCAGAGCCAGGTGATGCGCAGCAGCAGGCCGGCAACTTACAGAACCTCC TAGGCCTCCTACCCATCTTCATCTTTTTCGTTCTCCCTCTCCTCTCCTCTCTCTTCTCCGGCTCGTCGTCGCCGC AAACGCCGCACATGGTCTATGACTACCCCGACCATCCCTACACGCAGGGCCGGGTCACGCCTAACCTCAGAGTCA ACTACTTTGTCAACCCTTCCGAGGTCACGTCCTGGAGCAGCTCGAAGCTCAACCAGCTCGACCGGACGGCCGAGG TCAACCTCATACGACGGTTACGACTCGAGTGTGATAACGAGATTACGTTCAAGCAGCAGATGCGGCAGGATGCCG TTGGATGGTTCTACCAGGACGCGGATAAGATGGCGCAGGCTGACGCCTTTGAGATGCCTGCGTGCGAGAGGATGA GGTCTTTGGGCATCAGCAGGTGA |