Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03787
Gene name
Locationscaffold_03:3833633..3834403
Strand-
Gene length (bp)770
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 19 41 22
2 61 83 22
3 90 108 18
4 118 140 22
5 153 175 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03787
MALNGWFPPSTRARYETMLLLWQLIFPIMGSMQWFIEWYGMGKTSRPSRLNLPGRGAWMTMEAPGFLMLVYTVHS
LSGGVAGLPWRNQVLTGLFVIHYIYRAILFPLLQPSMAPIHLAVWTMALTFQLLNASCLGAWLAVHGPTTAQEWT
RQSPLPQFILGLSLFYAGLAANFFHDEEGWVL*
Coding >Ophcf2|03787
ATGGCCCTCAACGGCTGGTTTCCCCCCTCCACCCGTGCCCGCTACGAAACGATGCTACTTCTATGGCAGCTCATC
TTCCCCATCATGGGATCGATGCAATGGTTCATTGAGTGGTATGGGATGGGGAAGACTTCGAGACCTAGCAGGTTG
AATCTTCCGGGGAGGGGGGCGTGGATGACGATGGAGGCGCCTGGGTTTCTGATGCTGGTTTATACGGTTCATTCG
CTTTCGGGCGGGGTGGCGGGTCTGCCTTGGAGGAATCAGGTCCTCACCGGCCTCTTCGTCATCCACTACATCTAC
CGCGCAATCCTCTTCCCCCTCCTCCAACCCTCCATGGCCCCCATCCACCTCGCCGTCTGGACAATGGCGCTCACC
TTCCAGCTCCTAAACGCAAGCTGCCTGGGCGCCTGGCTAGCCGTGCACGGCCCAACCACAGCGCAAGAATGGACG
CGGCAAAGTCCCCTCCCGCAATTCATCCTCGGCCTAAGCCTCTTCTACGCCGGACTGGCGGCGAATTTCTTCCAC
GATGAGGAGGGGTGGGTATTATGA
Transcript >Ophcf2|03787
ATGGCCCTCAACGGCTGGTTTCCCCCCTCCACCCGTGCCCGCTACGAAACGATGCTACTTCTATGGCAGCTCATC
TTCCCCATCATGGGATCGATGCAATGGTTCATTGAGTGGTATGGGATGGGGAAGACTTCGAGACCTAGCAGGTTG
AATCTTCCGGGGAGGGGGGCGTGGATGACGATGGAGGCGCCTGGGTTTCTGATGCTGGTTTATACGGTTCATTCG
CTTTCGGGCGGGGTGGCGGGTCTGCCTTGGAGGAATCAGGTCCTCACCGGCCTCTTCGTCATCCACTACATCTAC
CGCGCAATCCTCTTCCCCCTCCTCCAACCCTCCATGGCCCCCATCCACCTCGCCGTCTGGACAATGGCGCTCACC
TTCCAGCTCCTAAACGCAAGCTGCCTGGGCGCCTGGCTAGCCGTGCACGGCCCAACCACAGCGCAAGAATGGACG
CGGCAAAGTCCCCTCCCGCAATTCATCCTCGGCCTAAGCCTCTTCTACGCCGGACTGGCGGCGAATTTCTTCCAC
GATGAGGAGGGGTGGGTATTATGA
Gene >Ophcf2|03787
ATGGCCCTCAACGGCTGGTTTCCCCCCTCCACCCGTGCCCGCTACGAAACGATGCTACTTCTATGGCAGCTCATC
TTCCCCATCGCAAGTTCCCCCCCCCCCCTTGGGAGTATGTCGACGGCGAATCGCTGATGAGGAGATGGGGGCAGA
TGGGATCGATGCAATGGTTCATTGAGTGGTATGGGATGGGGAAGACTTCGAGACCTAGCAGGTTGAATCTTCCGG
GGAGGGGGGCGTGGATGACGATGGAGGCGCCTGGGTTTCTGATGCTGGTTTATACGGTTCATTCGCTTTCGGGCG
GGGTGGCGGGTCTGCCTTGGAGGAATCAGGTCCTCACCGGCCTCTTCGTACCCCCCTCCCCCCCCCCCCAAAATT
GATTCTATACAGACAGATGGAAGCTGACTATCTATGTATGTAGGTCATCCACTACATCTACCGCGCAATCCTCTT
CCCCCTCCTCCAACCCTCCATGGCCCCCATCCACCTCGCCGTCTGGACAATGGCGCTCACCTTCCAGCTCCTAAA
CGCAAGCTGCCTGGGCGCCTGGCTAGCCGTGCACGGCCCAACCACAGCGCAAGAATGGACGCGGCAAAGTCCCCT
CCCGCAATTCATCCTCGGCCTAAGCCTCTTCTACGCCGGACTGGCGGCGAATTTCTTCCACGATGAGGAGTTGAG
GGAGATTCGAAGGCGGCGGCTTCGTCGTCTTCGTCACGAGCATCGTCGTGGTGGTGACCAGAGGGGTGGGGGTTA
CAAGGGGGTGGGTATTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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