Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03784
Gene name
Locationscaffold_03:3824433..3826450
Strand-
Gene length (bp)2017
Transcript length (bp)1815
Coding sequence length (bp)1815
Protein length (aa) 605

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01424 R3H R3H domain 3.0E-08 323 379
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.1E-04 181 251

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003676 nucleic acid binding Yes
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.7627 0.3434 0.0855 0.0836 0.0827 0.0005 0.0852 0.0415 0.0314 0.0037

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3753
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2950
Ophiocordyceps australis map64 (Brazil) OphauB2|2922
Ophiocordyceps camponoti-floridani Ophcf2|03784 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|589
Ophiocordyceps kimflemingae Ophio5|5000
Ophiocordyceps subramaniannii Hirsu2|7316

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03784
MSQQPHDMGYLDYASPANRSPSSSRQNYGAAFAAGLSLPRQSQRPLDAPLGSSALYPNDRIPAGFNPRAMDSMPV
NAAIHGGYMLDNGQAWNYSTAGVATVNGAVHGPNRQRSVNRRAALPQSWTEHAAMPMPNSLQPFPATLNGGHLQN
GCLRLDQGPAHTSPDLRSTASDGDQLIPTAIVIKNIPFAVRKETLASIMLDMNLPQPYAFNYHFDNGVFRGLAFA
NFQSADDTRVVIDAMNGMDVHGRKLRVEYKKMLPEAERERIEREKRERRGQLEEQHRAPMLHQQASLQSLGGMSQ
SQQRSTSSHLGDVDLNDPQTLEFYTELAMFKRDEGREALIFPASIIPEHRRCIHILAHHMGLEHQSMGEADSRQL
TVLKRQQPSPTVNVQNASVVNSLDMHKRGLSRAATFDFAADRDTRAANSNYAHVPGRQGPTLELPGSPDGSGIPN
NLRAAKSFADLRSFTPSPSQASSSYLAPGAGVGSIGTTATARFGDYIAHVPQPSSSTPGPKGDNGLGVALGGLSL
SPFDPSAMATQTRNAPGAIGSQRPSGPKTAPERQPRVPDWESSAGFGGRGAGSNGHAQRGSDSSDNGSRAVPKTT
GRYH*
Coding >Ophcf2|03784
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCACCTGCCAACCGCTCTCCGAGCTCGTCGAGG
CAAAACTACGGCGCCGCCTTCGCCGCAGGCCTGTCGCTGCCTCGGCAATCTCAGCGCCCTCTGGACGCCCCCCTC
GGCTCCTCTGCTCTCTACCCCAACGACCGCATACCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCATCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCAGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAACCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGAGCTGGACC
GAACACGCCGCCATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAAT
GGCTGCCTCCGTCTCGACCAGGGCCCTGCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAG
CTGATTCCCACGGCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTC
GACATGAACCTCCCCCAGCCTTATGCCTTCAACTATCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCC
AACTTTCAGTCCGCCGATGACACGCGTGTCGTCATTGACGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTG
CGCGTCGAGTACAAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGC
CAGCTCGAGGAGCAGCACCGCGCACCGATGCTGCATCAGCAGGCCTCGCTGCAGTCACTCGGTGGCATGTCTCAG
TCGCAGCAACGCAGCACCTCGAGTCACCTCGGTGACGTCGACCTCAACGACCCCCAGACGCTCGAGTTTTATACG
GAGCTTGCCATGTTCAAGCGCGACGAGGGGCGCGAGGCGCTCATATTCCCCGCCTCAATCATCCCCGAGCACCGG
CGGTGCATCCACATACTCGCCCATCACATGGGTCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTT
ACCGTCCTGAAGCGCCAACAGCCGTCGCCCACGGTAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATG
CACAAGCGGGGCCTCAGCCGGGCTGCCACCTTTGACTTCGCCGCCGATCGCGATACCCGCGCGGCCAACAGCAAC
TACGCCCATGTTCCGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAAT
AACCTGCGCGCGGCCAAGAGCTTCGCCGACTTGCGTTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTAC
CTGGCCCCCGGCGCCGGCGTTGGCAGCATCGGCACAACGGCCACGGCCCGCTTCGGCGACTACATAGCTCACGTT
CCCCAGCCGTCGTCGAGCACCCCCGGTCCCAAGGGCGACAACGGCCTCGGCGTCGCCCTCGGCGGCCTGAGCCTC
AGCCCCTTCGACCCCAGCGCCATGGCGACGCAGACGCGCAACGCCCCGGGTGCCATCGGCAGCCAGCGGCCCAGC
GGTCCCAAGACGGCGCCCGAGAGGCAGCCTCGTGTTCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGT
GCCGGCTCCAACGGTCACGCGCAGCGCGGCAGCGATTCGTCGGACAACGGCTCGCGCGCGGTTCCTAAAACGACG
GGCCGCTATCACTAG
Transcript >Ophcf2|03784
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCACCTGCCAACCGCTCTCCGAGCTCGTCGAGG
CAAAACTACGGCGCCGCCTTCGCCGCAGGCCTGTCGCTGCCTCGGCAATCTCAGCGCCCTCTGGACGCCCCCCTC
GGCTCCTCTGCTCTCTACCCCAACGACCGCATACCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCATCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCAGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAACCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGAGCTGGACC
GAACACGCCGCCATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAAT
GGCTGCCTCCGTCTCGACCAGGGCCCTGCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAG
CTGATTCCCACGGCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTC
GACATGAACCTCCCCCAGCCTTATGCCTTCAACTATCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCC
AACTTTCAGTCCGCCGATGACACGCGTGTCGTCATTGACGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTG
CGCGTCGAGTACAAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGC
CAGCTCGAGGAGCAGCACCGCGCACCGATGCTGCATCAGCAGGCCTCGCTGCAGTCACTCGGTGGCATGTCTCAG
TCGCAGCAACGCAGCACCTCGAGTCACCTCGGTGACGTCGACCTCAACGACCCCCAGACGCTCGAGTTTTATACG
GAGCTTGCCATGTTCAAGCGCGACGAGGGGCGCGAGGCGCTCATATTCCCCGCCTCAATCATCCCCGAGCACCGG
CGGTGCATCCACATACTCGCCCATCACATGGGTCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTT
ACCGTCCTGAAGCGCCAACAGCCGTCGCCCACGGTAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATG
CACAAGCGGGGCCTCAGCCGGGCTGCCACCTTTGACTTCGCCGCCGATCGCGATACCCGCGCGGCCAACAGCAAC
TACGCCCATGTTCCGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAAT
AACCTGCGCGCGGCCAAGAGCTTCGCCGACTTGCGTTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTAC
CTGGCCCCCGGCGCCGGCGTTGGCAGCATCGGCACAACGGCCACGGCCCGCTTCGGCGACTACATAGCTCACGTT
CCCCAGCCGTCGTCGAGCACCCCCGGTCCCAAGGGCGACAACGGCCTCGGCGTCGCCCTCGGCGGCCTGAGCCTC
AGCCCCTTCGACCCCAGCGCCATGGCGACGCAGACGCGCAACGCCCCGGGTGCCATCGGCAGCCAGCGGCCCAGC
GGTCCCAAGACGGCGCCCGAGAGGCAGCCTCGTGTTCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGT
GCCGGCTCCAACGGTCACGCGCAGCGCGGCAGCGATTCGTCGGACAACGGCTCGCGCGCGGTTCCTAAAACGACG
GGCCGCTATCACTAG
Gene >Ophcf2|03784
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCACCTGCCAACCGCTCTCCGAGCTCGTCGAGG
CAAAACTACGGCGCCGCCTTCGCCGCAGGCCTGTCGCTGCCTCGGCAATCTCAGCGCCCTCTGGACGCCCCCCTC
GGCTCCTCTGCTCTCTACCCCAACGACCGCATACCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCATCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCAGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAACCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGGTCTGTCCC
GCCCCTGTTTCCGGCCCTGCCGAACCAGCTGACTCTCCCCCCCCCCTCCTCTCTCCAGAGCTGGACCGAACACGC
CGCCATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAATGGCTGCCT
CCGTCTCGACCAGGGCCCTGCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAGCTGATTCC
CACGGCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTCGACATGAA
CCTCCCCCAGCCTTATGCCTTCAACTATCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCCAACTTTCA
GTCCGCCGATGACACGCGTGTCGTCATTGACGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTGCGCGTCGA
GTACAAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGCCAGCTCGA
GGAGCAGCACCGCGCACCGATGCTGCATCAGCAGGCCTCGCTGCAGTCACTCGGTGGCATGTCTCAGTCGCAGCA
ACGCAGCACCTCGAGTCACCTCGGTATGGGACTGCCGCTACGTATCCAGCGTTGTTCTTTTTTTTCTTCTTCTTC
TTTCATGCTGACCTCTCCCGTCAGGTGACGTCGACCTCAACGACCCCCAGACGCTCGAGTTTTATACGGAGCTTG
CCATGTTCAAGCGCGACGAGGGGCGCGAGGCGCTCATATTCCCCGCCTCAATCATCCCCGAGCACCGGCGGTGCA
TCCACATACTCGCCCATCACATGGGTCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTTACCGTCC
TGAAGCGCCAACAGCCGTCGCCCACGGTAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATGCACAAGC
GGGGCCTCAGCCGGGCTGCCACCTTTGACTTCGCCGCCGATCGCGATACCCGCGCGGCCAACAGCAACTACGCCC
ATGTTCCGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAATAACCTGC
GCGCGGCCAAGAGCTTCGCCGACTTGCGTTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTACCTGGCCC
CCGGCGCCGGCGTTGGCAGCATCGGCACAACGGCCACGGCCCGCTTCGGCGACTACATAGCTCACGTTCCCCAGC
CGTCGTCGAGCACCCCCGGTCCCAAGGGCGACAACGGCCTCGGCGTCGCCCTCGGCGGCCTGAGCCTCAGCCCCT
TCGACCCCAGCGCCATGGCGACGCAGACGCGCAACGCCCCGGGTGCCATCGGCAGCCAGCGGCCCAGCGGTCCCA
AGACGGCGCCCGAGAGGCAGCCTCGTGTTCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGTGCCGGCT
CCAACGGTCACGCGCAGCGCGGCAGCGGTAGGTCACCTCTTTCGTCAGTCCTGTCACGTAAAAGCTGACGGCTCG
CCTCGCCTCAGATTCGTCGGACAACGGCTCGCGCGCGGTTCCTAAAACGACGGGCCGCTATCACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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