Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03782
Gene name
Locationscaffold_03:3815945..3816424
Strand-
Gene length (bp)479
Transcript length (bp)417
Coding sequence length (bp)417
Protein length (aa) 139

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06726 BC10 Bladder cancer-related protein BC10 2.4E-17 1 55

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 37 59 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03782
MFCLRSWLPLLFIPTNASPAFIFLFFVCTYFLNRPCVYCSILLLILFLTSCNWSDHCFFDFRSNWFLPRPEVATS
DGSVFNATVIEMLNSTAKAIASAAADDIASRRAEWTGLGMEWLRSLLGRREWRVECMDIYIRL*
Coding >Ophcf2|03782
ATGTTCTGCCTGCGCAGCTGGCTTCCGCTGCTCTTCATTCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTC
TTCGTCTGCACCTACTTCCTCAACCGGCCGTGCGTATATTGCTCAATACTACTCCTGATACTCTTCCTCACGTCG
TGCAACTGGTCGGATCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTACCTCGGCCCGAAGTCGCCACCTCC
GACGGCTCCGTCTTCAACGCCACCGTCATCGAGATGCTCAACTCGACGGCCAAGGCGATTGCCAGCGCCGCCGCC
GACGACATTGCTTCCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGTCTCCTCGGAAGACGC
GAGTGGAGGGTTGAATGCATGGATATTTATATCCGCCTGTGA
Transcript >Ophcf2|03782
ATGTTCTGCCTGCGCAGCTGGCTTCCGCTGCTCTTCATTCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTC
TTCGTCTGCACCTACTTCCTCAACCGGCCGTGCGTATATTGCTCAATACTACTCCTGATACTCTTCCTCACGTCG
TGCAACTGGTCGGATCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTACCTCGGCCCGAAGTCGCCACCTCC
GACGGCTCCGTCTTCAACGCCACCGTCATCGAGATGCTCAACTCGACGGCCAAGGCGATTGCCAGCGCCGCCGCC
GACGACATTGCTTCCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGTCTCCTCGGAAGACGC
GAGTGGAGGGTTGAATGCATGGATATTTATATCCGCCTGTGA
Gene >Ophcf2|03782
ATGTTCTGCCTGCGCAGGTAAGTCGACGACGACGCCTCCTCCAAGAGACAGACGAGGCAAACAGTTGACGCTTAC
CCAGCTGGCTTCCGCTGCTCTTCATTCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTCTTCGTCTGCACCT
ACTTCCTCAACCGGCCGTGCGTATATTGCTCAATACTACTCCTGATACTCTTCCTCACGTCGTGCAACTGGTCGG
ATCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTACCTCGGCCCGAAGTCGCCACCTCCGACGGCTCCGTCT
TCAACGCCACCGTCATCGAGATGCTCAACTCGACGGCCAAGGCGATTGCCAGCGCCGCCGCCGACGACATTGCTT
CCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGTCTCCTCGGAAGACGCGAGTGGAGGGTTG
AATGCATGGATATTTATATCCGCCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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