Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03779
Gene name
Locationscaffold_03:3810274..3811603
Strand+
Gene length (bp)1329
Transcript length (bp)1329
Coding sequence length (bp)1329
Protein length (aa) 443

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 274 296 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03779
MRLSVHCLLLLLLLLTHSTTSALGSHDGVHRIQKKTPTTRQARLHARDDANTCGGGLKMCPSSLGGRCCPDNYDC
ARESCYATTRGQSTCGTKVGWYACAAVYGGEGAEPSQICIELRGFFADDVLFLGEGGCCPDGYLCQRAANCVPPS
GSPYTYGCPTSQHLCPSSMSYGCCPNGMACAVGQCYSTALTTTMRFLAMTSVLSNGRTTEMTSTVMATVRPEAPT
GFPSAADPEAGGDGDQSVHKYYPTAVAQISPPQPVGQGTADGAISGAQVAGLVAGSMSLLGLVCVVVYMLLRRFI
PRLGSRNRDSIMVAVGKSASSDDFVQPPPASDTDGPCCPELASPWPEDDRGAGKTPTMTMITPTISQLSRDDPFY
PRPSDVSEASSDVRAELEALSPPSELPGSPSSAGDGGWFASTPHSFRWTDGWYTSRRLDVVDEETYG*
Coding >Ophcf2|03779
ATGAGGCTCTCCGTCCACTGCCTCCTCCTCCTCCTCCTCCTCCTCACCCACTCCACGACTTCAGCCCTCGGTAGC
CATGATGGCGTCCACCGGATCCAGAAGAAAACCCCGACAACACGTCAGGCCCGTCTCCACGCCCGAGACGACGCA
AACACTTGCGGAGGCGGGCTGAAGATGTGTCCCAGCAGCCTCGGCGGCCGATGCTGTCCAGATAACTACGACTGC
GCGCGTGAGAGCTGCTATGCCACCACCAGGGGCCAGTCTACGTGCGGTACAAAGGTCGGGTGGTACGCCTGCGCG
GCTGTTTACGGAGGTGAGGGCGCTGAGCCGTCTCAGATCTGTATCGAGCTCAGGGGGTTTTTCGCTGACGACGTC
TTGTTTCTTGGTGAAGGCGGCTGTTGTCCGGATGGCTATCTATGCCAGAGAGCGGCCAACTGCGTGCCTCCGTCT
GGATCGCCTTACACGTACGGCTGTCCGACGAGCCAGCATCTTTGCCCGTCTTCGATGAGCTACGGCTGCTGTCCA
AACGGCATGGCCTGTGCCGTCGGTCAGTGCTACTCGACTGCCCTCACAACGACGATGCGTTTCCTCGCCATGACC
TCGGTCCTCTCCAATGGCCGTACCACTGAGATGACGTCGACGGTCATGGCCACGGTCCGGCCCGAGGCCCCGACC
GGCTTTCCCTCGGCCGCCGATCCGGAAGCCGGCGGTGATGGCGACCAGAGCGTTCACAAGTACTATCCCACTGCC
GTTGCCCAGATATCTCCGCCGCAGCCGGTCGGACAGGGCACCGCAGACGGAGCCATCTCAGGGGCTCAGGTGGCC
GGGCTCGTGGCCGGTTCCATGTCACTCCTTGGCCTCGTCTGTGTAGTCGTTTACATGCTTCTACGTCGATTCATT
CCGAGACTCGGCAGCAGGAACAGAGACTCCATCATGGTGGCCGTTGGCAAGTCAGCTTCTTCCGATGACTTCGTT
CAACCTCCTCCCGCATCAGACACGGACGGGCCCTGCTGCCCTGAACTCGCCTCACCGTGGCCAGAGGACGATCGT
GGAGCTGGCAAGACGCCTACTATGACGATGATTACGCCGACTATTAGCCAACTGAGCCGCGACGACCCGTTCTAT
CCGCGTCCAAGCGATGTTTCCGAGGCGTCCAGCGACGTCCGCGCTGAGCTCGAGGCCCTGTCCCCACCATCCGAG
CTCCCCGGCTCGCCCTCATCTGCTGGGGACGGAGGCTGGTTTGCTTCGACGCCGCACTCGTTCCGCTGGACGGAC
GGCTGGTATACATCTCGCAGGCTGGACGTGGTGGATGAGGAGACGTATGGTTGA
Transcript >Ophcf2|03779
ATGAGGCTCTCCGTCCACTGCCTCCTCCTCCTCCTCCTCCTCCTCACCCACTCCACGACTTCAGCCCTCGGTAGC
CATGATGGCGTCCACCGGATCCAGAAGAAAACCCCGACAACACGTCAGGCCCGTCTCCACGCCCGAGACGACGCA
AACACTTGCGGAGGCGGGCTGAAGATGTGTCCCAGCAGCCTCGGCGGCCGATGCTGTCCAGATAACTACGACTGC
GCGCGTGAGAGCTGCTATGCCACCACCAGGGGCCAGTCTACGTGCGGTACAAAGGTCGGGTGGTACGCCTGCGCG
GCTGTTTACGGAGGTGAGGGCGCTGAGCCGTCTCAGATCTGTATCGAGCTCAGGGGGTTTTTCGCTGACGACGTC
TTGTTTCTTGGTGAAGGCGGCTGTTGTCCGGATGGCTATCTATGCCAGAGAGCGGCCAACTGCGTGCCTCCGTCT
GGATCGCCTTACACGTACGGCTGTCCGACGAGCCAGCATCTTTGCCCGTCTTCGATGAGCTACGGCTGCTGTCCA
AACGGCATGGCCTGTGCCGTCGGTCAGTGCTACTCGACTGCCCTCACAACGACGATGCGTTTCCTCGCCATGACC
TCGGTCCTCTCCAATGGCCGTACCACTGAGATGACGTCGACGGTCATGGCCACGGTCCGGCCCGAGGCCCCGACC
GGCTTTCCCTCGGCCGCCGATCCGGAAGCCGGCGGTGATGGCGACCAGAGCGTTCACAAGTACTATCCCACTGCC
GTTGCCCAGATATCTCCGCCGCAGCCGGTCGGACAGGGCACCGCAGACGGAGCCATCTCAGGGGCTCAGGTGGCC
GGGCTCGTGGCCGGTTCCATGTCACTCCTTGGCCTCGTCTGTGTAGTCGTTTACATGCTTCTACGTCGATTCATT
CCGAGACTCGGCAGCAGGAACAGAGACTCCATCATGGTGGCCGTTGGCAAGTCAGCTTCTTCCGATGACTTCGTT
CAACCTCCTCCCGCATCAGACACGGACGGGCCCTGCTGCCCTGAACTCGCCTCACCGTGGCCAGAGGACGATCGT
GGAGCTGGCAAGACGCCTACTATGACGATGATTACGCCGACTATTAGCCAACTGAGCCGCGACGACCCGTTCTAT
CCGCGTCCAAGCGATGTTTCCGAGGCGTCCAGCGACGTCCGCGCTGAGCTCGAGGCCCTGTCCCCACCATCCGAG
CTCCCCGGCTCGCCCTCATCTGCTGGGGACGGAGGCTGGTTTGCTTCGACGCCGCACTCGTTCCGCTGGACGGAC
GGCTGGTATACATCTCGCAGGCTGGACGTGGTGGATGAGGAGACGTATGGTTGA
Gene >Ophcf2|03779
ATGAGGCTCTCCGTCCACTGCCTCCTCCTCCTCCTCCTCCTCCTCACCCACTCCACGACTTCAGCCCTCGGTAGC
CATGATGGCGTCCACCGGATCCAGAAGAAAACCCCGACAACACGTCAGGCCCGTCTCCACGCCCGAGACGACGCA
AACACTTGCGGAGGCGGGCTGAAGATGTGTCCCAGCAGCCTCGGCGGCCGATGCTGTCCAGATAACTACGACTGC
GCGCGTGAGAGCTGCTATGCCACCACCAGGGGCCAGTCTACGTGCGGTACAAAGGTCGGGTGGTACGCCTGCGCG
GCTGTTTACGGAGGTGAGGGCGCTGAGCCGTCTCAGATCTGTATCGAGCTCAGGGGGTTTTTCGCTGACGACGTC
TTGTTTCTTGGTGAAGGCGGCTGTTGTCCGGATGGCTATCTATGCCAGAGAGCGGCCAACTGCGTGCCTCCGTCT
GGATCGCCTTACACGTACGGCTGTCCGACGAGCCAGCATCTTTGCCCGTCTTCGATGAGCTACGGCTGCTGTCCA
AACGGCATGGCCTGTGCCGTCGGTCAGTGCTACTCGACTGCCCTCACAACGACGATGCGTTTCCTCGCCATGACC
TCGGTCCTCTCCAATGGCCGTACCACTGAGATGACGTCGACGGTCATGGCCACGGTCCGGCCCGAGGCCCCGACC
GGCTTTCCCTCGGCCGCCGATCCGGAAGCCGGCGGTGATGGCGACCAGAGCGTTCACAAGTACTATCCCACTGCC
GTTGCCCAGATATCTCCGCCGCAGCCGGTCGGACAGGGCACCGCAGACGGAGCCATCTCAGGGGCTCAGGTGGCC
GGGCTCGTGGCCGGTTCCATGTCACTCCTTGGCCTCGTCTGTGTAGTCGTTTACATGCTTCTACGTCGATTCATT
CCGAGACTCGGCAGCAGGAACAGAGACTCCATCATGGTGGCCGTTGGCAAGTCAGCTTCTTCCGATGACTTCGTT
CAACCTCCTCCCGCATCAGACACGGACGGGCCCTGCTGCCCTGAACTCGCCTCACCGTGGCCAGAGGACGATCGT
GGAGCTGGCAAGACGCCTACTATGACGATGATTACGCCGACTATTAGCCAACTGAGCCGCGACGACCCGTTCTAT
CCGCGTCCAAGCGATGTTTCCGAGGCGTCCAGCGACGTCCGCGCTGAGCTCGAGGCCCTGTCCCCACCATCCGAG
CTCCCCGGCTCGCCCTCATCTGCTGGGGACGGAGGCTGGTTTGCTTCGACGCCGCACTCGTTCCGCTGGACGGAC
GGCTGGTATACATCTCGCAGGCTGGACGTGGTGGATGAGGAGACGTATGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail