Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03774
Gene name
Locationscaffold_03:3787227..3787599
Strand+
Gene length (bp)372
Transcript length (bp)372
Coding sequence length (bp)372
Protein length (aa) 124

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00534 Glycos_transf_1 Glycosyl transferases group 1 4.1E-08 3 59

GO

GO Term Description Terminal node
GO:0016757 glycosyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 99 121 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03774
MLASRPVLAANSGGPVETVRDGRTGWLRDPRDVDAWSDAMHRALALSDAERKAMGDEAAARVRTDFGRDVMARRL
SHLLDVAAAAAEKGAPARLASPLTLAMLVMFFLFGAVLSAMCMRLLRG*
Coding >Ophcf2|03774
ATGCTCGCCTCCCGCCCCGTCCTGGCCGCCAACTCAGGCGGGCCCGTCGAGACGGTCCGCGACGGCAGAACCGGC
TGGCTCCGTGACCCGCGCGACGTCGACGCCTGGTCCGACGCCATGCATCGAGCTCTTGCCCTCTCGGATGCCGAG
CGCAAGGCAATGGGCGATGAGGCCGCGGCTCGTGTGCGCACCGACTTTGGCCGCGACGTCATGGCCCGTCGGCTC
AGTCATCTGCTTGATGTCGCTGCAGCGGCTGCCGAGAAGGGCGCTCCAGCCCGGCTTGCCAGTCCGCTGACTCTT
GCCATGTTGGTCATGTTCTTCCTCTTCGGGGCCGTCTTGTCTGCTATGTGCATGCGTCTGCTCAGAGGGTGA
Transcript >Ophcf2|03774
ATGCTCGCCTCCCGCCCCGTCCTGGCCGCCAACTCAGGCGGGCCCGTCGAGACGGTCCGCGACGGCAGAACCGGC
TGGCTCCGTGACCCGCGCGACGTCGACGCCTGGTCCGACGCCATGCATCGAGCTCTTGCCCTCTCGGATGCCGAG
CGCAAGGCAATGGGCGATGAGGCCGCGGCTCGTGTGCGCACCGACTTTGGCCGCGACGTCATGGCCCGTCGGCTC
AGTCATCTGCTTGATGTCGCTGCAGCGGCTGCCGAGAAGGGCGCTCCAGCCCGGCTTGCCAGTCCGCTGACTCTT
GCCATGTTGGTCATGTTCTTCCTCTTCGGGGCCGTCTTGTCTGCTATGTGCATGCGTCTGCTCAGAGGGTGA
Gene >Ophcf2|03774
ATGCTCGCCTCCCGCCCCGTCCTGGCCGCCAACTCAGGCGGGCCCGTCGAGACGGTCCGCGACGGCAGAACCGGC
TGGCTCCGTGACCCGCGCGACGTCGACGCCTGGTCCGACGCCATGCATCGAGCTCTTGCCCTCTCGGATGCCGAG
CGCAAGGCAATGGGCGATGAGGCCGCGGCTCGTGTGCGCACCGACTTTGGCCGCGACGTCATGGCCCGTCGGCTC
AGTCATCTGCTTGATGTCGCTGCAGCGGCTGCCGAGAAGGGCGCTCCAGCCCGGCTTGCCAGTCCGCTGACTCTT
GCCATGTTGGTCATGTTCTTCCTCTTCGGGGCCGTCTTGTCTGCTATGTGCATGCGTCTGCTCAGAGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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