Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03759
Gene name
Locationscaffold_03:3748413..3750029
Strand-
Gene length (bp)1616
Transcript length (bp)1560
Coding sequence length (bp)1560
Protein length (aa) 520

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 3.5E-29 109 398
PF08386 Abhydrolase_4 TAP-like protein 3.1E-14 424 513

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 2.86 0.62 5.09
Alive In ants, during behavior modification 782.75 278.54 1286.96
Dead In ants, recently dead 733.40 281.15 1185.66

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.826669 no
Dead Fungus 0.000238 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03759
MPPVTNPEKQPLTDSRGAFARARRRPAKTACWATALFVFAALTAGCSGRRQGSDSVPTIQWEACPSDYPSNLTCG
KLWVPMDHERGDRRQIQLGMIRSQATASKPLGNLIINPGGPGSSIVKIFVDGRQREVVGPRLLEQYHVIGPDPRG
VGISSPIRCDASLYNRRVPSYMTSQADVDARMAWNRALGRSCVDKTGPLIRHVDTISAAIDLEYIRKALGDEKLN
FMGISYGTQLGSQYAELYPERVGKMVLDGVVDHTQRNIDSLMTEAVAYEDSVKGFFRWCNTTTDCAFHGKDLSSI
FDKLIDDAIAKPIPALSCAENSTTDACASAVTGYQLISNAQDSISEPEKWPNLSLNLLQALRGNATSLSPSLAMK
ETDSSFSHTAISCLDWEREKTGSGLVRALMAARALTPHTRGVSETLDIQTSCMGWPVPVKNPPRRLRREQLAKAP
TILLVSGLHDPSTSVTWAVGLREQMPTAVSVFRDGFGHTSYWDYGETQRAVDGFLIEGELPADLTVFKT*
Coding >Ophcf2|03759
ATGCCTCCCGTCACCAATCCCGAGAAGCAACCCCTAACCGACAGCCGTGGAGCCTTCGCCCGGGCCCGTCGCCGT
CCAGCAAAGACGGCCTGCTGGGCAACAGCTCTGTTCGTCTTCGCCGCCCTCACCGCGGGCTGCTCGGGCCGGAGA
CAGGGATCCGATAGCGTCCCGACCATCCAGTGGGAAGCATGCCCTTCAGACTACCCTTCCAACCTGACCTGCGGC
AAGCTGTGGGTGCCAATGGATCACGAGAGAGGCGACAGACGGCAGATCCAGCTAGGCATGATCCGGTCCCAGGCA
ACGGCGTCGAAACCGCTAGGTAACCTGATCATCAACCCCGGTGGCCCGGGAAGCTCCATCGTCAAGATCTTCGTC
GATGGTAGACAGCGTGAGGTGGTAGGGCCTAGGCTGCTGGAACAGTACCATGTGATCGGACCGGACCCTCGAGGC
GTGGGCATCAGCAGCCCGATTCGATGCGACGCCAGCCTCTACAACCGACGTGTTCCCTCGTACATGACCAGCCAA
GCCGATGTCGATGCCCGGATGGCGTGGAATCGAGCATTAGGCCGCTCTTGCGTTGACAAGACAGGGCCCCTTATT
CGTCATGTTGATACCATCTCTGCCGCCATCGACCTGGAATACATTCGCAAGGCTCTCGGTGACGAAAAGCTCAAC
TTCATGGGCATCTCATACGGAACCCAGCTCGGGAGCCAGTACGCAGAGCTGTATCCCGAGAGAGTCGGCAAGATG
GTCCTCGACGGCGTCGTCGACCACACGCAAAGAAACATCGACAGCCTCATGACAGAGGCTGTAGCTTACGAAGAT
AGCGTCAAGGGTTTCTTCCGCTGGTGTAACACCACGACCGACTGCGCCTTTCACGGAAAGGATCTCTCTTCCATC
TTCGACAAGCTAATCGACGACGCCATCGCCAAACCCATCCCAGCCCTGTCCTGCGCAGAGAACTCTACCACCGAT
GCCTGCGCCTCCGCAGTAACAGGCTATCAGCTCATCAGCAACGCGCAGGACTCCATATCCGAGCCGGAAAAGTGG
CCGAATCTATCCCTGAATCTCCTCCAAGCACTAAGAGGCAACGCCACGAGCCTTTCGCCTTCACTGGCCATGAAA
GAGACCGACTCGTCCTTTTCCCACACGGCCATCTCGTGCCTCGACTGGGAGCGAGAAAAGACCGGCAGCGGATTG
GTGAGGGCACTGATGGCCGCGCGAGCCCTGACGCCTCATACGCGTGGCGTTTCGGAGACGTTGGACATTCAGACG
TCATGTATGGGCTGGCCGGTGCCCGTCAAGAATCCTCCGAGGAGACTGAGAAGGGAACAGCTGGCCAAGGCGCCG
ACCATTCTACTCGTCAGCGGGCTGCACGATCCTTCGACGAGCGTGACGTGGGCGGTTGGCTTGCGGGAGCAGATG
CCGACGGCCGTTAGTGTGTTTCGAGATGGCTTTGGCCATACGAGTTACTGGGACTATGGGGAGACGCAGAGGGCG
GTCGATGGGTTTTTGATTGAGGGTGAGCTTCCGGCTGATCTCACTGTTTTCAAGACGTAG
Transcript >Ophcf2|03759
ATGCCTCCCGTCACCAATCCCGAGAAGCAACCCCTAACCGACAGCCGTGGAGCCTTCGCCCGGGCCCGTCGCCGT
CCAGCAAAGACGGCCTGCTGGGCAACAGCTCTGTTCGTCTTCGCCGCCCTCACCGCGGGCTGCTCGGGCCGGAGA
CAGGGATCCGATAGCGTCCCGACCATCCAGTGGGAAGCATGCCCTTCAGACTACCCTTCCAACCTGACCTGCGGC
AAGCTGTGGGTGCCAATGGATCACGAGAGAGGCGACAGACGGCAGATCCAGCTAGGCATGATCCGGTCCCAGGCA
ACGGCGTCGAAACCGCTAGGTAACCTGATCATCAACCCCGGTGGCCCGGGAAGCTCCATCGTCAAGATCTTCGTC
GATGGTAGACAGCGTGAGGTGGTAGGGCCTAGGCTGCTGGAACAGTACCATGTGATCGGACCGGACCCTCGAGGC
GTGGGCATCAGCAGCCCGATTCGATGCGACGCCAGCCTCTACAACCGACGTGTTCCCTCGTACATGACCAGCCAA
GCCGATGTCGATGCCCGGATGGCGTGGAATCGAGCATTAGGCCGCTCTTGCGTTGACAAGACAGGGCCCCTTATT
CGTCATGTTGATACCATCTCTGCCGCCATCGACCTGGAATACATTCGCAAGGCTCTCGGTGACGAAAAGCTCAAC
TTCATGGGCATCTCATACGGAACCCAGCTCGGGAGCCAGTACGCAGAGCTGTATCCCGAGAGAGTCGGCAAGATG
GTCCTCGACGGCGTCGTCGACCACACGCAAAGAAACATCGACAGCCTCATGACAGAGGCTGTAGCTTACGAAGAT
AGCGTCAAGGGTTTCTTCCGCTGGTGTAACACCACGACCGACTGCGCCTTTCACGGAAAGGATCTCTCTTCCATC
TTCGACAAGCTAATCGACGACGCCATCGCCAAACCCATCCCAGCCCTGTCCTGCGCAGAGAACTCTACCACCGAT
GCCTGCGCCTCCGCAGTAACAGGCTATCAGCTCATCAGCAACGCGCAGGACTCCATATCCGAGCCGGAAAAGTGG
CCGAATCTATCCCTGAATCTCCTCCAAGCACTAAGAGGCAACGCCACGAGCCTTTCGCCTTCACTGGCCATGAAA
GAGACCGACTCGTCCTTTTCCCACACGGCCATCTCGTGCCTCGACTGGGAGCGAGAAAAGACCGGCAGCGGATTG
GTGAGGGCACTGATGGCCGCGCGAGCCCTGACGCCTCATACGCGTGGCGTTTCGGAGACGTTGGACATTCAGACG
TCATGTATGGGCTGGCCGGTGCCCGTCAAGAATCCTCCGAGGAGACTGAGAAGGGAACAGCTGGCCAAGGCGCCG
ACCATTCTACTCGTCAGCGGGCTGCACGATCCTTCGACGAGCGTGACGTGGGCGGTTGGCTTGCGGGAGCAGATG
CCGACGGCCGTTAGTGTGTTTCGAGATGGCTTTGGCCATACGAGTTACTGGGACTATGGGGAGACGCAGAGGGCG
GTCGATGGGTTTTTGATTGAGGGTGAGCTTCCGGCTGATCTCACTGTTTTCAAGACGTAG
Gene >Ophcf2|03759
ATGCCTCCCGTCACCAATCCCGAGAAGCAACCCCTAACCGACAGCCGTGGAGCCTTCGCCCGGGCCCGTCGCCGT
CCAGCAAAGACGGCCTGCTGGGCAACAGCTCTGTTCGTCTTCGCCGCCCTCACCGCGGGCTGCTCGGGCCGGAGA
CAGGGATCCGATAGCGTCCCGACCATCCAGTGGGAAGCATGCCCTTCAGACTACCCTTCCAACCTGACCTGCGGC
AAGCTGTGGGTGCCAATGGATCACGAGAGAGGCGACAGACGGCAGATCCAGCTAGGCATGATCCGGTCCCAGGCA
ACGGCGTCGAAACCGCTAGGTAACCTGATCATCAACCCCGGTGGCCCGGGAAGCTCCATCGTCAAGATCTTCGTC
GATGGTAGACAGCGTGAGGTGGTAGGGCCTAGGCTGCTGGAACAGTACCATGTGATCGGACCGGACCCTCGAGGC
GTGGGCATCAGCAGCCCGATTCGATGCGACGCCAGCCTCTACAACCGACGTGTTCCCTCGTACATGACCAGCCAA
GCCGATGTCGATGCCCGGATGGCGTGGAATCGAGCATTAGGCCGCTCTTGCGTTGACAAGACAGGGCCCCTTATT
CGTCATGTTGATACCATCTCTGCCGCCATCGACCTGGAATACATTCGCAAGGTGAGTCGAGGATATCTTGCCTGT
TACTCTAGACGTCTCAAGCTATTACGAACTAGGCTCTCGGTGACGAAAAGCTCAACTTCATGGGCATCTCATACG
GAACCCAGCTCGGGAGCCAGTACGCAGAGCTGTATCCCGAGAGAGTCGGCAAGATGGTCCTCGACGGCGTCGTCG
ACCACACGCAAAGAAACATCGACAGCCTCATGACAGAGGCTGTAGCTTACGAAGATAGCGTCAAGGGTTTCTTCC
GCTGGTGTAACACCACGACCGACTGCGCCTTTCACGGAAAGGATCTCTCTTCCATCTTCGACAAGCTAATCGACG
ACGCCATCGCCAAACCCATCCCAGCCCTGTCCTGCGCAGAGAACTCTACCACCGATGCCTGCGCCTCCGCAGTAA
CAGGCTATCAGCTCATCAGCAACGCGCAGGACTCCATATCCGAGCCGGAAAAGTGGCCGAATCTATCCCTGAATC
TCCTCCAAGCACTAAGAGGCAACGCCACGAGCCTTTCGCCTTCACTGGCCATGAAAGAGACCGACTCGTCCTTTT
CCCACACGGCCATCTCGTGCCTCGACTGGGAGCGAGAAAAGACCGGCAGCGGATTGGTGAGGGCACTGATGGCCG
CGCGAGCCCTGACGCCTCATACGCGTGGCGTTTCGGAGACGTTGGACATTCAGACGTCATGTATGGGCTGGCCGG
TGCCCGTCAAGAATCCTCCGAGGAGACTGAGAAGGGAACAGCTGGCCAAGGCGCCGACCATTCTACTCGTCAGCG
GGCTGCACGATCCTTCGACGAGCGTGACGTGGGCGGTTGGCTTGCGGGAGCAGATGCCGACGGCCGTTAGTGTGT
TTCGAGATGGCTTTGGCCATACGAGTTACTGGGACTATGGGGAGACGCAGAGGGCGGTCGATGGGTTTTTGATTG
AGGGTGAGCTTCCGGCTGATCTCACTGTTTTCAAGACGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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