Protein ID | Ophcf2|03757 |
Gene name | |
Location | scaffold_03:3744275..3746345 |
Strand | + |
Gene length (bp) | 2070 |
Transcript length (bp) | 1821 |
Coding sequence length (bp) | 1821 |
Protein length (aa) | 607 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 224 | 246 | 22 |
2 | 259 | 278 | 19 |
3 | 288 | 310 | 22 |
4 | 466 | 488 | 22 |
5 | 492 | 509 | 17 |
6 | 522 | 541 | 19 |
7 | 556 | 578 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 8.54 | 3.59 | 13.50 |
Alive | In ants, during behavior modification | 30.21 | 15.62 | 44.80 |
Dead | In ants, recently dead | 20.96 | 10.81 | 31.11 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.040382 | yes |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03757 MSEPCSCMTSVSLCYRAIQNTVTLRPVPWQASSLVMADDDVPPIMASSRCQPLGKVWTAVGSFAGLVWKWSVPHR NSHRPGDAVYASVWGGGLSVDGEALRDAVHAAVPDISRKEVPEEEEQIRLFLRERFKQTDGDGETSQESILVETP EEAWPHIPFSIRSHLAAANASHLEAKLRLLLRESFHPAAGLASLTRSTSGVQKTFRMWRKGFAQAVSWRERVGVN VFFVVLACSAVYPDIAAGFLGERSYNQRSIGSRIVTLIQLYFLWTFPFHSLWLLFNWSLERLLGAFVGNSVYALV ALVPAIRVSYRQAWFRTMMLALSMSWQIGVQFSPTIRDYVMRLVVRRQMRALRRKTKTGDEGIDWVSVDEAIARE LVSQRAFVKQRLNDTLPAWYEVPIKVRTERYIHFTSSMELGRSADQLIGLLKNDLEGIVETLEDYKSTARDGQEV LTTTDRGHVEPRAPKFLLVLFDVVIFAYVCYSFWTQPFTFNTVVAYSTVVVIKQTILALKRYQTVKGARRLFTNM VSINILGMLLVSTPVTVDRKVLAKDGNMVALTLAMVFATLFLAEPVAPALLTVTERGVAASSRVIGFTQRTEEES VMTYDW* |
Coding | >Ophcf2|03757 ATGTCTGAGCCTTGTTCTTGTATGACGTCTGTCAGCCTATGTTACCGTGCCATTCAGAACACTGTCACCCTACGT CCAGTCCCTTGGCAAGCCTCATCCCTTGTCATGGCTGACGATGACGTGCCGCCGATCATGGCCTCGAGCAGATGC CAGCCGCTCGGAAAGGTCTGGACCGCCGTGGGAAGCTTCGCTGGCCTCGTCTGGAAGTGGTCCGTGCCGCACAGA AACAGTCATCGGCCGGGGGATGCTGTCTATGCTTCTGTCTGGGGTGGGGGGTTGAGCGTCGACGGAGAGGCTCTG CGTGACGCTGTACACGCTGCGGTGCCTGACATATCTCGAAAGGAGGTGCCGGAAGAGGAGGAGCAAATAAGACTC TTCCTGAGAGAGCGGTTCAAGCAGACAGACGGCGATGGAGAAACATCACAGGAATCCATCCTTGTTGAAACACCA GAAGAAGCCTGGCCACACATCCCATTCTCCATCAGAAGCCATCTCGCCGCCGCCAACGCCTCTCATCTCGAGGCC AAACTGCGTCTCCTCCTCCGGGAAAGCTTCCACCCCGCGGCCGGACTCGCAAGCCTGACGCGTTCGACAAGCGGA GTGCAGAAGACGTTCCGCATGTGGAGGAAGGGCTTCGCTCAGGCGGTAAGTTGGCGCGAGAGAGTGGGCGTCAAC GTCTTCTTCGTCGTCCTCGCCTGCAGTGCCGTCTATCCGGACATTGCGGCCGGCTTCCTGGGCGAGCGGTCTTAT AACCAGCGGTCTATCGGCAGCCGGATCGTGACGCTGATCCAGCTGTACTTTCTCTGGACGTTTCCCTTCCACTCG CTTTGGCTGCTCTTCAATTGGAGTCTGGAGCGTCTTCTGGGCGCCTTTGTTGGCAACTCGGTCTACGCTTTGGTT GCCCTAGTGCCGGCGATCCGCGTCTCGTATCGACAAGCCTGGTTCAGGACCATGATGTTGGCGCTCTCCATGAGC TGGCAGATAGGGGTGCAGTTCTCGCCCACCATTAGAGACTATGTGATGCGTCTGGTCGTCCGGAGGCAGATGCGG GCTCTGCGGCGGAAGACAAAAACAGGAGACGAGGGCATCGACTGGGTCAGCGTTGACGAGGCCATCGCAAGAGAG CTCGTCTCTCAAAGGGCCTTTGTCAAACAGCGGCTGAATGATACGCTTCCAGCCTGGTACGAGGTGCCCATCAAA GTGCGGACAGAGCGCTATATACACTTTACCAGCAGCATGGAGCTCGGCCGCTCGGCCGATCAGCTCATCGGCCTG CTAAAGAACGACCTGGAGGGCATCGTCGAGACGCTCGAGGACTACAAGTCGACAGCCCGAGACGGCCAGGAGGTC CTGACGACCACCGACCGAGGGCACGTCGAGCCTCGAGCGCCAAAGTTCCTCCTCGTATTGTTTGACGTCGTCATC TTTGCCTACGTCTGCTACTCTTTCTGGACGCAGCCCTTTACCTTCAACACCGTCGTAGCCTACAGCACCGTCGTC GTCATCAAGCAGACGATCCTGGCACTCAAGCGGTACCAGACGGTCAAGGGCGCGCGTCGACTCTTCACAAACATG GTCTCTATCAACATCCTCGGAATGCTGCTAGTGTCGACGCCCGTGACGGTGGATAGAAAGGTGCTGGCCAAGGAC GGGAACATGGTGGCTTTGACGCTGGCCATGGTCTTTGCTACCTTGTTTCTGGCTGAGCCTGTTGCTCCGGCTTTG CTGACGGTGACGGAGAGGGGTGTTGCTGCGTCGTCGAGAGTGATTGGATTCACTCAGCGGACAGAGGAAGAGTCG GTCATGACTTATGACTGGTAA |
Transcript | >Ophcf2|03757 ATGTCTGAGCCTTGTTCTTGTATGACGTCTGTCAGCCTATGTTACCGTGCCATTCAGAACACTGTCACCCTACGT CCAGTCCCTTGGCAAGCCTCATCCCTTGTCATGGCTGACGATGACGTGCCGCCGATCATGGCCTCGAGCAGATGC CAGCCGCTCGGAAAGGTCTGGACCGCCGTGGGAAGCTTCGCTGGCCTCGTCTGGAAGTGGTCCGTGCCGCACAGA AACAGTCATCGGCCGGGGGATGCTGTCTATGCTTCTGTCTGGGGTGGGGGGTTGAGCGTCGACGGAGAGGCTCTG CGTGACGCTGTACACGCTGCGGTGCCTGACATATCTCGAAAGGAGGTGCCGGAAGAGGAGGAGCAAATAAGACTC TTCCTGAGAGAGCGGTTCAAGCAGACAGACGGCGATGGAGAAACATCACAGGAATCCATCCTTGTTGAAACACCA GAAGAAGCCTGGCCACACATCCCATTCTCCATCAGAAGCCATCTCGCCGCCGCCAACGCCTCTCATCTCGAGGCC AAACTGCGTCTCCTCCTCCGGGAAAGCTTCCACCCCGCGGCCGGACTCGCAAGCCTGACGCGTTCGACAAGCGGA GTGCAGAAGACGTTCCGCATGTGGAGGAAGGGCTTCGCTCAGGCGGTAAGTTGGCGCGAGAGAGTGGGCGTCAAC GTCTTCTTCGTCGTCCTCGCCTGCAGTGCCGTCTATCCGGACATTGCGGCCGGCTTCCTGGGCGAGCGGTCTTAT AACCAGCGGTCTATCGGCAGCCGGATCGTGACGCTGATCCAGCTGTACTTTCTCTGGACGTTTCCCTTCCACTCG CTTTGGCTGCTCTTCAATTGGAGTCTGGAGCGTCTTCTGGGCGCCTTTGTTGGCAACTCGGTCTACGCTTTGGTT GCCCTAGTGCCGGCGATCCGCGTCTCGTATCGACAAGCCTGGTTCAGGACCATGATGTTGGCGCTCTCCATGAGC TGGCAGATAGGGGTGCAGTTCTCGCCCACCATTAGAGACTATGTGATGCGTCTGGTCGTCCGGAGGCAGATGCGG GCTCTGCGGCGGAAGACAAAAACAGGAGACGAGGGCATCGACTGGGTCAGCGTTGACGAGGCCATCGCAAGAGAG CTCGTCTCTCAAAGGGCCTTTGTCAAACAGCGGCTGAATGATACGCTTCCAGCCTGGTACGAGGTGCCCATCAAA GTGCGGACAGAGCGCTATATACACTTTACCAGCAGCATGGAGCTCGGCCGCTCGGCCGATCAGCTCATCGGCCTG CTAAAGAACGACCTGGAGGGCATCGTCGAGACGCTCGAGGACTACAAGTCGACAGCCCGAGACGGCCAGGAGGTC CTGACGACCACCGACCGAGGGCACGTCGAGCCTCGAGCGCCAAAGTTCCTCCTCGTATTGTTTGACGTCGTCATC TTTGCCTACGTCTGCTACTCTTTCTGGACGCAGCCCTTTACCTTCAACACCGTCGTAGCCTACAGCACCGTCGTC GTCATCAAGCAGACGATCCTGGCACTCAAGCGGTACCAGACGGTCAAGGGCGCGCGTCGACTCTTCACAAACATG GTCTCTATCAACATCCTCGGAATGCTGCTAGTGTCGACGCCCGTGACGGTGGATAGAAAGGTGCTGGCCAAGGAC GGGAACATGGTGGCTTTGACGCTGGCCATGGTCTTTGCTACCTTGTTTCTGGCTGAGCCTGTTGCTCCGGCTTTG CTGACGGTGACGGAGAGGGGTGTTGCTGCGTCGTCGAGAGTGATTGGATTCACTCAGCGGACAGAGGAAGAGTCG GTCATGACTTATGACTGGTAA |
Gene | >Ophcf2|03757 ATGTCTGAGCCTTGTTCTTGTATGACGTCTGTCAGCCTGTGCGTTGTATCACCCCCAAGCCCGGATCCCTGATCC CTTGGATCCCCTGAACACGAGCACGAGGTGGACGACCGACTAACAAGTTCCCATCCCGCTTCCCCTCTCCTCATA AGTAGATGTTACCGTGCCATTCAGAACACTGTCACCCTACGTCCAGTCCCTTGGCAAGCCTCATCCCTTGTCATG GCTGACGATGACGTGCCGCCGATCATGGCCTCGAGCAGATGCCAGCCGCTCGGAAAGGTCTGGACCGCCGTGGGA AGCTTCGCTGGCCTCGTCTGGAAGTGGTCCGTGCCGCACAGAAACAGTCATCGGCCGGGGGATGCTGTCTATGCT TCTGTCTGGGGTGGGGGGTTGAGCGTCGACGGAGAGGCTCTGCGTGACGCTGTACACGCTGCGGTGCCTGACATA TCTCGAAAGGAGGTGCCGGAAGAGGAGGAGCAAATAAGACTCTTCCTGAGAGAGCGGTTCAAGCAGACAGACGGC GATGGAGAAACATCACAGGAATCCATCCTTGTTGAAACACCAGAAGAAGCCTGGCCACACATCCCATTCTCCATC AGAAGCCATCTCGCCGCCGCCAACGCCTCTCATCTCGAGGCCAAACTGCGTCTCCTCCTCCGGGAAAGCTTCCAC CCCGCGGCCGGACTCGCAAGCCTGACGCGTTCGACAAGCGGAGTGCAGAAGACGTTCCGCATGTGGAGGAAGGGC TTCGCTCAGGCGGTAAGTTGGCGCGAGAGAGTGGGCGTCAACGTCTTCTTCGTCGTCCTCGCCTGCAGTGCCGTC TATCCGGACATTGCGGCCGGCTTCCTGGGCGAGCGGTCTTATAACCAGCGGTCTATCGGCAGCCGGATCGTGACG CTGATCCAGCTGTACTTTCTCTGGACGTTTCCCTTCCACTCGCTTTGGCTGCTCTTCAATTGGAGTCTGGAGCGT CTTCTGGGCGCCTTTGTTGGCAACTCGGTCTACGCTTTGGTTGCCCTAGTGCCGGCGATCCGCGTCTCGTATCGA CAAGCCTGGTTCAGGACCATGATGTTGGCGCTCTCCATGAGCTGGCAGATAGGGGTGCAGTTCTCGCCCACCATT AGAGACTATGTGATGCGTCTGGTCGTCCGGAGGCAGATGCGGGCTCTGCGGCGGAAGACAAAAACAGGAGACGAG GGCATCGACTGGGTCAGCGTTGACGAGGCCATCGCAAGAGAGCTCGTCTCTCAAAGGGCCTTTGTCAAACAGCGG CTGAATGATACGCTTCCAGCCTGGTACGAGGTGCCCATCAAAGTGCGGACAGAGCGCTATATACACTTTACCAGC AGCATGGAGCTCGGCCGCTCGGCCGATCAGCTCATCGGCCTGCTAAAGAACGACCTGGAGGGCATCGTCGAGACG CTCGAGGACTACAAGTCGACAGCCCGAGACGGCCAGGAGGTCCTGACGACCACCGACCGAGGGCACGTCGAGCCT CGAGCGCCAAAGTTCCTCCTCGTATTGTTTGACGTCGTCATCTTTGCCTACGTCTGCTACTCTTTCTGGACGCAG CCCTTTACCTTCAACACCGTCGTAGCCTACAGCACCGTCGTCGTCATCAAGCAGACGATCCTGGCACTCAAGCGG TACCAGACGGTCAAGGGCGCGCGTCGACTCTTCACAAACATGGTCTCTATCAACATCCTCGGAATGCTGCTAGTG TCGACGCCCGTGACGGTGGATAGAAAGGTGCTGGCCAAGGACGGGAACATGGTGGCTTTGACGCTGGCCATGGTC TTTGCTACCTTGTTTCTGGCTGAGCCTGTTGCTCCGGCTTTGCTGACGGTGACGGAGAGGGGTGTTGCTGCGTCG TCGAGAGTGGTGGGTAGGATTCGAGGGCGAGGTAGGGAGAGACAGAAAGGAGGAGATGGCGTTGGATAGGGGAGG GTTGTCTGAGAATGTTGCTGGATGGGGATTCCTGTGCCGTTGGGTACGATGCTGAAGATGTGGCAGATTGGATTC ACTCAGCGGACAGAGGAAGAGTCGGTCATGACTTATGACTGGTAA |