Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03744
Gene name
Locationscaffold_03:3717650..3718680
Strand+
Gene length (bp)1030
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 1.3E-30 44 190

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 249 271 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03744
MRCSLENTLVVGLALLVKSSSAGHGDTTKSANNPSTASTTDDTMGPATFLWPNPRKWTSDLDNSAPCGSTLEVAR
RTNFPLKGGKLSLVAQDDYYDAQISISYSKRPTENNEFKRLSIAKKIDDLDPGHTCVHVPDAPDDIKLGTNATIQ
MMYHSNWDKPHNQTFYVCADITYAEPKEVKGMDRLCFDKTEPGEDDISPPWVPQVEKKPFGDGPSSSSSSSSSSS
SRSSEVTSVPVTHNNKSKLGGGAIAGITIGALSGAVVVAAIALFVYRRGQQKKRKENMARMENAREHQGPMEKYA
GHSNA*
Coding >Ophcf2|03744
ATGCGCTGTTCGCTGGAAAACACGCTGGTCGTCGGCCTGGCCCTTCTGGTCAAGTCGTCATCCGCTGGCCACGGT
GACACGACCAAGTCGGCCAACAACCCTTCGACGGCGTCTACTACGGATGACACCATGGGTCCTGCTACCTTTCTC
TGGCCGAACCCGAGGAAGTGGACGAGCGACCTGGACAACTCGGCGCCTTGCGGCTCGACGCTCGAAGTTGCCCGA
CGCACCAACTTCCCCCTCAAGGGTGGGAAGCTCTCGTTGGTGGCTCAGGACGACTACTACGACGCCCAGATCAGC
ATCTCGTACAGCAAGCGCCCAACCGAGAACAACGAGTTCAAGCGCCTCAGCATCGCCAAAAAGATCGACGACCTC
GACCCGGGCCACACCTGCGTCCACGTGCCCGACGCCCCCGACGACATCAAGCTCGGCACAAACGCAACAATCCAG
ATGATGTACCACAGCAACTGGGACAAGCCCCATAACCAAACCTTTTACGTCTGCGCCGATATCACCTACGCCGAG
CCCAAGGAGGTCAAGGGCATGGACAGACTGTGCTTCGACAAGACGGAACCAGGCGAGGATGATATCAGCCCCCCC
TGGGTCCCACAGGTGGAGAAGAAGCCCTTCGGAGACGGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGAAGCTCCGAGGTGACCAGCGTGCCCGTCACGCACAACAACAAGAGCAAGCTGGGCGGCGGTGCCATCGCG
GGCATCACCATCGGTGCCCTGTCCGGAGCTGTTGTCGTGGCTGCCATTGCCTTGTTCGTGTACCGTCGTGGCCAG
CAGAAGAAGCGCAAGGAGAACATGGCTCGGATGGAGAATGCGCGGGAACATCAGGGGCCTATGGAGAAGTATGCC
GGTCACAGCAATGCGTAG
Transcript >Ophcf2|03744
ATGCGCTGTTCGCTGGAAAACACGCTGGTCGTCGGCCTGGCCCTTCTGGTCAAGTCGTCATCCGCTGGCCACGGT
GACACGACCAAGTCGGCCAACAACCCTTCGACGGCGTCTACTACGGATGACACCATGGGTCCTGCTACCTTTCTC
TGGCCGAACCCGAGGAAGTGGACGAGCGACCTGGACAACTCGGCGCCTTGCGGCTCGACGCTCGAAGTTGCCCGA
CGCACCAACTTCCCCCTCAAGGGTGGGAAGCTCTCGTTGGTGGCTCAGGACGACTACTACGACGCCCAGATCAGC
ATCTCGTACAGCAAGCGCCCAACCGAGAACAACGAGTTCAAGCGCCTCAGCATCGCCAAAAAGATCGACGACCTC
GACCCGGGCCACACCTGCGTCCACGTGCCCGACGCCCCCGACGACATCAAGCTCGGCACAAACGCAACAATCCAG
ATGATGTACCACAGCAACTGGGACAAGCCCCATAACCAAACCTTTTACGTCTGCGCCGATATCACCTACGCCGAG
CCCAAGGAGGTCAAGGGCATGGACAGACTGTGCTTCGACAAGACGGAACCAGGCGAGGATGATATCAGCCCCCCC
TGGGTCCCACAGGTGGAGAAGAAGCCCTTCGGAGACGGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGAAGCTCCGAGGTGACCAGCGTGCCCGTCACGCACAACAACAAGAGCAAGCTGGGCGGCGGTGCCATCGCG
GGCATCACCATCGGTGCCCTGTCCGGAGCTGTTGTCGTGGCTGCCATTGCCTTGTTCGTGTACCGTCGTGGCCAG
CAGAAGAAGCGCAAGGAGAACATGGCTCGGATGGAGAATGCGCGGGAACATCAGGGGCCTATGGAGAAGTATGCC
GGTCACAGCAATGCGTAG
Gene >Ophcf2|03744
ATGCGCTGTTCGCTGGAAAACACGCTGGTCGTCGGCCTGGCCCTTCTGGTCAAGTCGTCATCCGCTGGCCACGGT
GACACGACCAAGTCGGCCAACAACCCTTCGACGGCGTCTACTACGGATGACACCATGGGTCCTGCTACCTTTCTC
TGGCCGAACCCGAGGAAGTGGACGAGCGACCTGGACAACTCGGCGCCTTGCGGCTCGACGCTCGAAGTTGCCCGA
CGCACCAACTTCCCCCTCAGTGAGTCGGAGTGTTTGTGTTTTTCTGGTAAAGAGAGGTGTTGCTGAGGTTGAGTA
GAGGGTGGGAAGCTCTCGTTGGTGGCTCAGGACGACTACTACGACGCCCAGATCAGCATCTCGTACAGCAAGCGT
ACGTTGTATCCATCCGAGACACCGGCCTCTCTCTCCAACTAACACGAATCAAGGCCCAACCGAGAACAACGAGTT
CAAGCGCCTCAGCATCGCCAAAAAGATCGACGACCTCGACCCGGGCCACACCTGCGTCCACGTGCCCGACGCCCC
CGACGACATCAAGCTCGGCACAAACGCAACAATCCAGATGATGTACCACAGCAACTGGGACAAGCCCCATAACCA
AACCTTTTACGTCTGCGCCGATATCACCTACGCCGAGCCCAAGGAGGTCAAGGGCATGGACAGACTGTGCTTCGA
CAAGACGGAACCAGGCGAGGATGATATCAGCCCCCCCTGGGTCCCACAGGTGGAGAAGAAGCCCTTCGGAGACGG
CCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCTCCGAGGTGACCAGCGTGCCCGTCACGCA
CAACAACAAGAGCAAGCTGGGCGGCGGTGCCATCGCGGGCATCACCATCGGTGCCCTGTCCGGAGCTGTTGTCGT
GGCTGCCATTGCCTTGTTCGTGTACCGTCGTGGCCAGCAGAAGAAGCGCAAGGAGAACATGGCTCGGATGGAGAA
TGCGCGGGAACATCAGGGGCCTATGGAGAAGTATGCCGGTCACAGCAATGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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