Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|03734
Gene name
Location	scaffold_03:3687628..3688711
Strand	-
Gene length (bp)	1083
Transcript length (bp)	1083
Coding sequence length (bp)	1083
Protein length (aa)	361

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	8.7E-14	70	322

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	6.82	2.08	11.57
Alive	In ants, during behavior modification	1.65	0.00	3.66
Dead	In ants, recently dead	0.38	0.00	0.92

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.002117	yes
Alive	Dead	0.005885	yes
Dead	Fungus	0.000238	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|03734 MAIRKLVTTALAASTALGIVLEAPQPNFATNIFELSNFTFTSGESLPKLRLHYHTLGTVKRDENNKTTNAVLLMH TVASHSGQFQSQSYIHGLFDPSQPLDANDFFIIIPDAIGHGNSSKPSNELKARFPHYNYRDIVRAAHQLLAEGLA VNHLRLCMGTWMGGMNCWLWAGMFPDEVDAVFTLASVPSPPSSRTEIIRKMIVDSIVSDPAYKGGEYTEQPRLGL TNALNADLSMTLAPTLLQKIAPDAKASSSFLDKIRNLFIPLVDGNDMLYQWSAASDFDATPLLGNITARVMAVNT ADDAYNPPELGILEESMKRVPKGQSVVIPQSKDTLGHLSYVQPALWKELLVKLLEESKPT*
Coding	>Ophcf2\|03734 ATGGCCATCCGAAAGCTCGTCACGACCGCATTGGCCGCCTCCACCGCTCTCGGAATCGTCCTCGAGGCTCCCCAG CCGAACTTTGCAACAAACATCTTTGAGTTATCCAACTTTACATTCACCAGCGGCGAGTCTCTTCCGAAACTTCGT CTTCACTATCACACGCTCGGCACGGTCAAGAGAGACGAGAACAACAAGACGACCAATGCTGTGCTCTTGATGCAC ACCGTCGCAAGCCACAGCGGCCAGTTCCAATCGCAATCGTACATCCACGGCCTCTTCGACCCATCTCAACCACTC GACGCAAACGACTTCTTCATCATCATCCCCGATGCCATCGGCCACGGCAACTCCAGCAAACCCAGCAACGAGCTG AAAGCCCGCTTCCCGCACTACAACTACCGGGACATTGTCCGGGCCGCGCACCAACTGCTCGCAGAAGGTCTGGCC GTCAATCACCTGCGGCTTTGCATGGGGACTTGGATGGGCGGTATGAACTGCTGGCTCTGGGCAGGCATGTTTCCG GACGAGGTCGACGCCGTCTTCACGCTGGCTTCGGTGCCTTCTCCGCCGTCGAGCCGGACAGAGATCATCCGCAAG ATGATTGTCGATAGCATCGTGTCTGATCCGGCTTACAAGGGGGGCGAGTACACGGAGCAGCCGAGGCTTGGCCTT ACCAATGCTCTCAACGCCGACCTGTCCATGACGCTGGCGCCGACTCTCTTGCAGAAGATTGCCCCGGACGCCAAA GCTTCGAGTAGCTTCCTGGACAAGATTCGTAACCTGTTCATTCCCCTTGTCGACGGCAACGACATGCTGTACCAG TGGTCTGCAGCATCCGACTTCGACGCCACGCCCCTGCTCGGTAACATCACGGCCCGAGTCATGGCCGTCAATACG GCAGACGACGCTTACAACCCGCCGGAGCTCGGAATCCTCGAGGAGAGCATGAAAAGGGTGCCCAAGGGGCAATCC GTCGTCATCCCTCAGAGCAAGGATACGCTGGGCCACTTGAGCTACGTGCAGCCGGCTCTGTGGAAGGAGCTGCTC GTGAAGCTGCTTGAGGAATCGAAGCCTACATAA
Transcript	>Ophcf2\|03734 ATGGCCATCCGAAAGCTCGTCACGACCGCATTGGCCGCCTCCACCGCTCTCGGAATCGTCCTCGAGGCTCCCCAG CCGAACTTTGCAACAAACATCTTTGAGTTATCCAACTTTACATTCACCAGCGGCGAGTCTCTTCCGAAACTTCGT CTTCACTATCACACGCTCGGCACGGTCAAGAGAGACGAGAACAACAAGACGACCAATGCTGTGCTCTTGATGCAC ACCGTCGCAAGCCACAGCGGCCAGTTCCAATCGCAATCGTACATCCACGGCCTCTTCGACCCATCTCAACCACTC GACGCAAACGACTTCTTCATCATCATCCCCGATGCCATCGGCCACGGCAACTCCAGCAAACCCAGCAACGAGCTG AAAGCCCGCTTCCCGCACTACAACTACCGGGACATTGTCCGGGCCGCGCACCAACTGCTCGCAGAAGGTCTGGCC GTCAATCACCTGCGGCTTTGCATGGGGACTTGGATGGGCGGTATGAACTGCTGGCTCTGGGCAGGCATGTTTCCG GACGAGGTCGACGCCGTCTTCACGCTGGCTTCGGTGCCTTCTCCGCCGTCGAGCCGGACAGAGATCATCCGCAAG ATGATTGTCGATAGCATCGTGTCTGATCCGGCTTACAAGGGGGGCGAGTACACGGAGCAGCCGAGGCTTGGCCTT ACCAATGCTCTCAACGCCGACCTGTCCATGACGCTGGCGCCGACTCTCTTGCAGAAGATTGCCCCGGACGCCAAA GCTTCGAGTAGCTTCCTGGACAAGATTCGTAACCTGTTCATTCCCCTTGTCGACGGCAACGACATGCTGTACCAG TGGTCTGCAGCATCCGACTTCGACGCCACGCCCCTGCTCGGTAACATCACGGCCCGAGTCATGGCCGTCAATACG GCAGACGACGCTTACAACCCGCCGGAGCTCGGAATCCTCGAGGAGAGCATGAAAAGGGTGCCCAAGGGGCAATCC GTCGTCATCCCTCAGAGCAAGGATACGCTGGGCCACTTGAGCTACGTGCAGCCGGCTCTGTGGAAGGAGCTGCTC GTGAAGCTGCTTGAGGAATCGAAGCCTACATAA
Gene	>Ophcf2\|03734 ATGGCCATCCGAAAGCTCGTCACGACCGCATTGGCCGCCTCCACCGCTCTCGGAATCGTCCTCGAGGCTCCCCAG CCGAACTTTGCAACAAACATCTTTGAGTTATCCAACTTTACATTCACCAGCGGCGAGTCTCTTCCGAAACTTCGT CTTCACTATCACACGCTCGGCACGGTCAAGAGAGACGAGAACAACAAGACGACCAATGCTGTGCTCTTGATGCAC ACCGTCGCAAGCCACAGCGGCCAGTTCCAATCGCAATCGTACATCCACGGCCTCTTCGACCCATCTCAACCACTC GACGCAAACGACTTCTTCATCATCATCCCCGATGCCATCGGCCACGGCAACTCCAGCAAACCCAGCAACGAGCTG AAAGCCCGCTTCCCGCACTACAACTACCGGGACATTGTCCGGGCCGCGCACCAACTGCTCGCAGAAGGTCTGGCC GTCAATCACCTGCGGCTTTGCATGGGGACTTGGATGGGCGGTATGAACTGCTGGCTCTGGGCAGGCATGTTTCCG GACGAGGTCGACGCCGTCTTCACGCTGGCTTCGGTGCCTTCTCCGCCGTCGAGCCGGACAGAGATCATCCGCAAG ATGATTGTCGATAGCATCGTGTCTGATCCGGCTTACAAGGGGGGCGAGTACACGGAGCAGCCGAGGCTTGGCCTT ACCAATGCTCTCAACGCCGACCTGTCCATGACGCTGGCGCCGACTCTCTTGCAGAAGATTGCCCCGGACGCCAAA GCTTCGAGTAGCTTCCTGGACAAGATTCGTAACCTGTTCATTCCCCTTGTCGACGGCAACGACATGCTGTACCAG TGGTCTGCAGCATCCGACTTCGACGCCACGCCCCTGCTCGGTAACATCACGGCCCGAGTCATGGCCGTCAATACG GCAGACGACGCTTACAACCCGCCGGAGCTCGGAATCCTCGAGGAGAGCATGAAAAGGGTGCCCAAGGGGCAATCC GTCGTCATCCCTCAGAGCAAGGATACGCTGGGCCACTTGAGCTACGTGCAGCCGGCTCTGTGGAAGGAGCTGCTC GTGAAGCTGCTTGAGGAATCGAAGCCTACATAA

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