Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03711
Gene name
Locationscaffold_03:3618178..3619076
Strand+
Gene length (bp)898
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05572 Peptidase_M43 Pregnancy-associated plasma protein-A 1.0E-06 90 249

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.215 0.2389 0.8875 0.2219 0.3893 0.1515 0.0407 0.0362 0.0307 0.0167

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6892
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03711 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3026
Ophiocordyceps camponoti-rufipedis Ophun1|4180
Ophiocordyceps kimflemingae Ophio5|1258

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03711
MLKMRRMAESFDDIAVPLKQLDKIRITTYVHVLVSYPLELIEITDKAIFEQVEILNAAFNPGNIYFRLGGYGRGL
LQGDEFFFRNGSPVVKKHRRGDQRSLNLFITDSILDGEGGKNKKFIKGFATMPGPSHDYSGDCAVVHTCSLKGHT
CGHYGKDPNLGISAAHEVGHWMGLLHVNGGEGVTDDYIDDTPPESTSYDGVRVSVADGRCAAMKPRKGGKYANVG
NIMTYAPDLCRWFFSEGQFRMMRRMWWNFRAKKPLRK*
Coding >Ophcf2|03711
ATGCTAAAGATGCGTCGGATGGCTGAGAGTTTCGATGACATTGCGGTCCCCCTGAAGCAACTTGACAAGATCAGG
ATTACCACATACGTGCACGTCCTCGTGAGCTATCCGCTGGAGCTGATTGAAATAACGGACAAGGCCATATTCGAA
CAGGTGGAAATATTAAACGCGGCCTTTAACCCGGGCAACATATACTTTCGACTCGGAGGCTACGGCCGTGGATTG
CTTCAAGGCGATGAATTCTTCTTTCGAAATGGATCGCCGGTGGTCAAAAAGCATCGTAGAGGCGACCAACGCTCC
CTCAACCTCTTCATCACAGACAGCATCCTGGATGGCGAAGGCGGAAAAAACAAGAAATTCATCAAAGGATTCGCA
ACCATGCCTGGCCCCAGCCATGACTACTCGGGAGACTGCGCCGTAGTCCACACGTGCTCTCTCAAGGGACACACC
TGCGGCCATTACGGCAAAGACCCGAACCTGGGCATATCGGCCGCGCACGAAGTAGGCCATTGGATGGGACTCCTT
CACGTAAACGGAGGCGAAGGCGTCACCGACGACTATATCGACGATACTCCTCCCGAAAGCACTAGTTATGACGGC
GTGCGGGTGTCGGTCGCCGACGGGAGATGCGCAGCCATGAAGCCGAGGAAGGGCGGCAAATACGCCAACGTGGGA
AATATAATGACCTACGCACCAGACCTCTGCAGATGGTTCTTTAGCGAAGGGCAGTTTCGCATGATGCGACGTATG
TGGTGGAATTTCCGCGCCAAGAAACCGCTGCGCAAGTGA
Transcript >Ophcf2|03711
ATGCTAAAGATGCGTCGGATGGCTGAGAGTTTCGATGACATTGCGGTCCCCCTGAAGCAACTTGACAAGATCAGG
ATTACCACATACGTGCACGTCCTCGTGAGCTATCCGCTGGAGCTGATTGAAATAACGGACAAGGCCATATTCGAA
CAGGTGGAAATATTAAACGCGGCCTTTAACCCGGGCAACATATACTTTCGACTCGGAGGCTACGGCCGTGGATTG
CTTCAAGGCGATGAATTCTTCTTTCGAAATGGATCGCCGGTGGTCAAAAAGCATCGTAGAGGCGACCAACGCTCC
CTCAACCTCTTCATCACAGACAGCATCCTGGATGGCGAAGGCGGAAAAAACAAGAAATTCATCAAAGGATTCGCA
ACCATGCCTGGCCCCAGCCATGACTACTCGGGAGACTGCGCCGTAGTCCACACGTGCTCTCTCAAGGGACACACC
TGCGGCCATTACGGCAAAGACCCGAACCTGGGCATATCGGCCGCGCACGAAGTAGGCCATTGGATGGGACTCCTT
CACGTAAACGGAGGCGAAGGCGTCACCGACGACTATATCGACGATACTCCTCCCGAAAGCACTAGTTATGACGGC
GTGCGGGTGTCGGTCGCCGACGGGAGATGCGCAGCCATGAAGCCGAGGAAGGGCGGCAAATACGCCAACGTGGGA
AATATAATGACCTACGCACCAGACCTCTGCAGATGGTTCTTTAGCGAAGGGCAGTTTCGCATGATGCGACGTATG
TGGTGGAATTTCCGCGCCAAGAAACCGCTGCGCAAGTGA
Gene >Ophcf2|03711
ATGCTAAAGATGCGTCGGATGGCTGAGAGTTTCGATGACATTGCGGTCCCCCTGAAGCAACTTGACAAGATCAGG
ATTACCACATACGTGCACGTCCTCGTGAGCTATCCGCTGGAGCTGATTGAAATAACGGTAATGAACCTGATGACG
GACCGATGGATGGGAGAAAGACTAAGCCCTCGCAGGACAAGGCCATATTCGAACAGGTGGAAATATTAAACGCGG
CCTTTAACCCGGGCAACATATACTTTCGACTCGGAGGCTACGGCCGTGGATTGCTTCAAGGCGATGAATTCTTCT
TTCGAAATGGATCGCCGGTGGTCAAAAAGCATCGTAGAGGCGACCAACGCTCCCTCAACCTCTTCATCACAGACA
GCATCCTGGATGGCGAAGGCGGAAAAAACAAGAAATTCATCAAAGGATTCGCAACCATGCCTGGCCCCAGCCATG
ACTACTCGGGAGACTGCGCCGTAGTCCACACGTGCTCTCTCAAGGGACACACCTGCGGCCATTACGGCAAAGACC
CGAACCTGGGCATATCGGCCGCGCACGAAGTAGGCCATTGGATGGGACTCCTTCACGTAAACGGAGGCGAAGGCG
TCACCGACGACTATATCGACGATACTCCTCCCGAAAGCACTAGTTATGACGGCGTGCGGGTGTCGGTCGCCGACG
GGAGATGCGCAGCCATGAAGCCGAGGAAGGGCGGCAAATACGCCAACGTGGGAAATATAATGACCTACGCACCAG
AGTAGGTTGCGATGCCATGACTCAGTCGGTTGGCGCAAGTTCTGACGAGATTCGCAGCCTCTGCAGATGGTTCTT
TAGCGAAGGGCAGTTTCGCATGATGCGACGTATGTGGTGGAATTTCCGCGCCAAGAAACCGCTGCGCAAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail