Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03708
Gene name
Locationscaffold_03:3609282..3610224
Strand-
Gene length (bp)942
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

Domain # Start End Length
1 162 184 22
2 197 219 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03708
MNAGQRVSDSTGPLMFARSLVLSVERGSGLARSSRLARPPKLAGERISMLTGPLMLAGSLVLSGERESGLARPLM
FARSLMLAGEWVSGLAGHLMLTRPLMLAVSFMLSGEGESGFTRPFMLAVSFMLSGKRVSGFTVPLILAVSLMLSE
ERESGLTRLFMLAVSFVLAESFMLAVPLLLAVLLMPVESFMLARKRVSGLTVPLVLAVPVMLVVPLVLAEERITV
LIRSSRLARPLRERKLVLTRPSNLARERRTGLARYSRLTYSLRLAWHPGLTRFLRLAVSLMLAGGRVSGPG*
Coding >Ophcf2|03708
ATGAACGCCGGGCAACGGGTATCCGACTCTACCGGGCCTCTCATGTTCGCCAGGTCTCTCGTGCTCTCCGTGGAA
AGGGGATCCGGGCTCGCGCGGTCTTCCAGGCTCGCTCGGCCTCCGAAGCTCGCCGGGGAACGGATCTCCATGCTG
ACCGGGCCTCTCATGCTCGCCGGATCTCTCGTTCTCTCCGGGGAAAGGGAATCCGGGCTCGCGCGGCCTCTCATG
TTCGCCAGGTCTCTGATGCTCGCCGGGGAATGGGTATCCGGGCTCGCCGGGCATCTCATGCTTACCAGGCCTCTC
ATGCTCGCTGTGTCTTTCATGCTCTCCGGGGAAGGGGAATCCGGGTTCACGCGACCTTTCATGCTCGCCGTATCT
TTCATGCTCTCCGGGAAACGGGTATCCGGGTTCACCGTGCCTCTCATTCTCGCCGTGTCTCTCATGCTCTCCGAG
GAAAGGGAATCCGGGCTCACGCGGCTTTTCATGCTCGCCGTGTCTTTCGTGCTCGCCGAATCTTTCATGCTCGCC
GTGCCTCTCCTGCTCGCCGTGCTTCTCATGCCCGTCGAATCTTTCATGCTCGCCAGGAAACGGGTATCCGGGCTC
ACCGTGCCTCTCGTGCTCGCCGTGCCTGTCATGCTCGTCGTGCCTCTCGTGCTCGCCGAGGAGAGGATAACCGTG
CTCATTAGGTCTTCCAGGCTCGCCAGACCTCTCAGGGAAAGGAAGCTTGTGCTCACCCGGCCGTCCAACCTCGCC
AGAGAACGGAGAACCGGACTCGCCCGTTATTCCAGACTCACCTACTCTCTCAGGCTCGCCTGGCATCCCGGACTC
ACCCGATTTCTCAGGCTGGCCGTGTCTCTCATGCTGGCCGGGGGACGGGTGTCCGGGCCTGGCTGA
Transcript >Ophcf2|03708
ATGAACGCCGGGCAACGGGTATCCGACTCTACCGGGCCTCTCATGTTCGCCAGGTCTCTCGTGCTCTCCGTGGAA
AGGGGATCCGGGCTCGCGCGGTCTTCCAGGCTCGCTCGGCCTCCGAAGCTCGCCGGGGAACGGATCTCCATGCTG
ACCGGGCCTCTCATGCTCGCCGGATCTCTCGTTCTCTCCGGGGAAAGGGAATCCGGGCTCGCGCGGCCTCTCATG
TTCGCCAGGTCTCTGATGCTCGCCGGGGAATGGGTATCCGGGCTCGCCGGGCATCTCATGCTTACCAGGCCTCTC
ATGCTCGCTGTGTCTTTCATGCTCTCCGGGGAAGGGGAATCCGGGTTCACGCGACCTTTCATGCTCGCCGTATCT
TTCATGCTCTCCGGGAAACGGGTATCCGGGTTCACCGTGCCTCTCATTCTCGCCGTGTCTCTCATGCTCTCCGAG
GAAAGGGAATCCGGGCTCACGCGGCTTTTCATGCTCGCCGTGTCTTTCGTGCTCGCCGAATCTTTCATGCTCGCC
GTGCCTCTCCTGCTCGCCGTGCTTCTCATGCCCGTCGAATCTTTCATGCTCGCCAGGAAACGGGTATCCGGGCTC
ACCGTGCCTCTCGTGCTCGCCGTGCCTGTCATGCTCGTCGTGCCTCTCGTGCTCGCCGAGGAGAGGATAACCGTG
CTCATTAGGTCTTCCAGGCTCGCCAGACCTCTCAGGGAAAGGAAGCTTGTGCTCACCCGGCCGTCCAACCTCGCC
AGAGAACGGAGAACCGGACTCGCCCGTTATTCCAGACTCACCTACTCTCTCAGGCTCGCCTGGCATCCCGGACTC
ACCCGATTTCTCAGGCTGGCCGTGTCTCTCATGCTGGCCGGGGGACGGGTGTCCGGGCCTGGCTGA
Gene >Ophcf2|03708
ATGAACGCCGGGCAACGGGTATCCGACTCTACCGGGCCTCTCATGTTCGCCAGGTCTCTCGTGCTCTCCGTGGAA
AGGGGATCCGGGCTCGCGCGGTCTTCCAGGCTCGCTCGGCCTCCGAAGCTCGCCGGGGAACGGATCTCCATGCTG
ACCGGGCCTCTCATGCTCGCCGGATCTCTCGTTCTCTCCGGGGAAAGGGAATCCGGGCTCGCGCGGCCTCTCATG
TTCGCCAGGTCTCTGATGCTCGCCGGGGAATGGGTATCCGGGCTCGCCGGGCATCTCATGCTTACCAGGCCTCTC
ATGCTCGCTGTGTCTTTCATGCTCTCCGGGGAAGGGGAATCCGGGTTCACGCGACCTTTCATGCTCGCCGTATCT
TTCATGCTCTCCGGGAAACGGGTATCCGGGTTCACCGTGCCTCTCATTCTCGCCGTGTCTCTCATGCTCTCCGAG
GAAAGGGAATCCGGGCTCACGCGGCTTTTCATGCTCGCCGTGTCTTTCGTGCTCGCCGAATCTTTCATGCTCGCC
GTGCCTCTCCTGCTCGCCGTGCTTCTCATGCCCGTCGAATCTTTCATGCTCGCCAGGAAACGGGTATCCGGGCTC
ACCGTGCCTCTCGTGCTCGCCGTGCCTGTCATGCTCGTCGTGCCTCTCGTGCTCGCCGAGGAGAGGATAACCGTG
CTCATTAGGTCTTCCAGGCTCGCCAGACCTCTCAGGTTCGCTAGGAAAGGGAGATTCGGGCTGACCCGGCCGTCT
ATGCTCGCTAGGGAAAGGAAGCTTGTGCTCACCCGGCCGTCCAACCTCGCCAGAGAACGGAGAACCGGACTCGCC
CGTTATTCCAGACTCACCTACTCTCTCAGGCTCGCCTGGCATCCCGGACTCACCCGATTTCTCAGGCTGGCCGTG
TCTCTCATGCTGGCCGGGGGACGGGTGTCCGGGCCTGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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