Protein ID | Ophcf2|03697 |
Gene name | |
Location | scaffold_03:3574954..3576577 |
Strand | - |
Gene length (bp) | 1623 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00135 | COesterase | Carboxylesterase family | 1.3E-64 | 33 | 489 |
PF20434 | BD-FAE | BD-FAE | 3.3E-09 | 100 | 212 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.3256 | 0.2576 | 0.7517 | 0.0458 | 0.3073 | 0.0182 | 0.2588 | 0.095 | 0.0726 | 0.4897 |
Orthofinder run ID | 4 |
Orthogroup | 139 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03697 MEDHRPRAKPGLQTHRPLDPDNGIFPRNPLRRSPLGPLRLRPPRPRSLPLGSRDATISAPACPQMLLSTTATDIF TKLAGKALDSPLLREYRGREDCLTLDVQRPAGVERGAKLPVLFWIWGGAFAFGGSAMYDATSLLELARSQNQDFI FVAINHRLGGFGFLPGKQVLADGSANLGLLDQRLALEWVADNIEAFGGDPEKVTLWGLSSGGISVFDQMLLYGGN ATYKGRPLFRAAIVNSGGSAPAEPVDGVKGQAIYDAVAERAGCLDTTDSLTCLRNKDYPTLLDAMNSVPAFFSYS SIALSYLPRPDGVVLPDSPDRLAEQGRIHAVPVIMGNQEDEGTTIALFQWNLTSADDLAAYLSTALFPTFPRRKL KEYVDLYDPPLLQGSPHRTGLLNELYPGFKRVAAVLGDLTFTLSRRILLLTLSRTKPTMKVWSYISSYHHAIPFL GTYHASDVTQVFFGVPDNYAARSCRTYYLNFLHHLDPNKGVLRYAFWPRWSADGRNLLWFRWPWGNDFMKDDFRP GAEAWLAENAGGLHL* |
Coding | >Ophcf2|03697 ATGGAAGACCATCGACCTAGAGCTAAGCCCGGACTCCAAACTCACCGGCCGCTCGACCCCGACAACGGAATCTTT CCACGCAATCCCCTACGCCGATCCCCCCTCGGACCCCTCCGTCTCCGACCCCCCCGTCCGAGATCCCTCCCGCTG GGGAGCCGCGACGCCACCATCTCCGCCCCCGCCTGTCCGCAGATGCTCCTCTCCACCACGGCCACCGACATCTTC ACCAAGCTGGCCGGCAAGGCGCTAGACTCCCCGCTGCTCAGGGAGTATCGCGGACGGGAAGATTGCCTCACCCTC GACGTGCAGCGTCCGGCGGGCGTCGAGAGGGGCGCCAAGCTCCCCGTCCTCTTCTGGATATGGGGAGGGGCCTTT GCCTTTGGCGGGAGCGCAATGTACGACGCCACCAGCCTCCTGGAGCTCGCCCGGTCCCAGAACCAAGACTTCATC TTCGTCGCCATCAACCATCGGCTGGGCGGCTTCGGCTTCCTGCCCGGGAAGCAGGTGCTGGCCGACGGCAGCGCC AATCTCGGACTGTTGGATCAGAGGTTGGCGCTCGAGTGGGTGGCCGATAACATCGAGGCTTTCGGGGGGGATCCG GAAAAGGTCACCCTCTGGGGACTCTCTTCCGGTGGCATCTCCGTCTTCGATCAGATGCTCCTCTACGGCGGGAAC GCCACTTACAAGGGGAGGCCGCTGTTTCGAGCCGCCATCGTCAACTCGGGCGGTTCCGCGCCGGCGGAGCCCGTC GATGGCGTCAAGGGACAGGCCATCTACGACGCCGTCGCCGAGAGAGCGGGCTGTCTCGACACCACCGACTCGCTG ACCTGCCTCCGGAACAAAGACTACCCGACCCTCCTCGACGCCATGAACTCCGTCCCCGCCTTCTTCTCCTACTCG TCCATCGCCCTCTCCTACCTGCCCCGACCGGACGGCGTCGTCCTACCCGACAGTCCCGACCGGTTAGCCGAGCAG GGCCGCATCCACGCCGTGCCCGTCATCATGGGGAATCAGGAGGACGAGGGCACGACCATCGCCCTGTTCCAGTGG AACCTGACCTCGGCCGATGACCTCGCCGCCTATCTCTCCACCGCCCTCTTCCCTACCTTTCCGAGGCGGAAGCTG AAGGAGTACGTCGACCTCTACGACCCGCCCTTGCTACAGGGCTCCCCCCATCGAACGGGCCTCCTCAACGAGCTC TACCCGGGCTTCAAACGCGTGGCCGCCGTGCTGGGAGACCTGACCTTTACCCTCTCCCGCCGCATCCTGCTCCTG ACCCTCTCCCGCACCAAGCCGACGATGAAGGTCTGGTCCTACATCTCCTCCTACCACCACGCCATCCCCTTCCTG GGAACCTACCACGCCTCGGACGTGACGCAGGTCTTCTTCGGGGTGCCGGATAACTACGCGGCGCGGAGTTGCCGG ACGTATTACCTCAACTTCCTGCATCATCTCGATCCGAACAAGGGGGTTTTGCGCTATGCTTTTTGGCCGAGGTGG AGTGCCGACGGGAGGAATCTCTTGTGGTTTCGGTGGCCTTGGGGGAATGACTTCATGAAGGATGATTTTAGGCCG GGGGCCGAGGCTTGGCTGGCGGAGAACGCGGGGGGGTTGCACTTGTGA |
Transcript | >Ophcf2|03697 ATGGAAGACCATCGACCTAGAGCTAAGCCCGGACTCCAAACTCACCGGCCGCTCGACCCCGACAACGGAATCTTT CCACGCAATCCCCTACGCCGATCCCCCCTCGGACCCCTCCGTCTCCGACCCCCCCGTCCGAGATCCCTCCCGCTG GGGAGCCGCGACGCCACCATCTCCGCCCCCGCCTGTCCGCAGATGCTCCTCTCCACCACGGCCACCGACATCTTC ACCAAGCTGGCCGGCAAGGCGCTAGACTCCCCGCTGCTCAGGGAGTATCGCGGACGGGAAGATTGCCTCACCCTC GACGTGCAGCGTCCGGCGGGCGTCGAGAGGGGCGCCAAGCTCCCCGTCCTCTTCTGGATATGGGGAGGGGCCTTT GCCTTTGGCGGGAGCGCAATGTACGACGCCACCAGCCTCCTGGAGCTCGCCCGGTCCCAGAACCAAGACTTCATC TTCGTCGCCATCAACCATCGGCTGGGCGGCTTCGGCTTCCTGCCCGGGAAGCAGGTGCTGGCCGACGGCAGCGCC AATCTCGGACTGTTGGATCAGAGGTTGGCGCTCGAGTGGGTGGCCGATAACATCGAGGCTTTCGGGGGGGATCCG GAAAAGGTCACCCTCTGGGGACTCTCTTCCGGTGGCATCTCCGTCTTCGATCAGATGCTCCTCTACGGCGGGAAC GCCACTTACAAGGGGAGGCCGCTGTTTCGAGCCGCCATCGTCAACTCGGGCGGTTCCGCGCCGGCGGAGCCCGTC GATGGCGTCAAGGGACAGGCCATCTACGACGCCGTCGCCGAGAGAGCGGGCTGTCTCGACACCACCGACTCGCTG ACCTGCCTCCGGAACAAAGACTACCCGACCCTCCTCGACGCCATGAACTCCGTCCCCGCCTTCTTCTCCTACTCG TCCATCGCCCTCTCCTACCTGCCCCGACCGGACGGCGTCGTCCTACCCGACAGTCCCGACCGGTTAGCCGAGCAG GGCCGCATCCACGCCGTGCCCGTCATCATGGGGAATCAGGAGGACGAGGGCACGACCATCGCCCTGTTCCAGTGG AACCTGACCTCGGCCGATGACCTCGCCGCCTATCTCTCCACCGCCCTCTTCCCTACCTTTCCGAGGCGGAAGCTG AAGGAGTACGTCGACCTCTACGACCCGCCCTTGCTACAGGGCTCCCCCCATCGAACGGGCCTCCTCAACGAGCTC TACCCGGGCTTCAAACGCGTGGCCGCCGTGCTGGGAGACCTGACCTTTACCCTCTCCCGCCGCATCCTGCTCCTG ACCCTCTCCCGCACCAAGCCGACGATGAAGGTCTGGTCCTACATCTCCTCCTACCACCACGCCATCCCCTTCCTG GGAACCTACCACGCCTCGGACGTGACGCAGGTCTTCTTCGGGGTGCCGGATAACTACGCGGCGCGGAGTTGCCGG ACGTATTACCTCAACTTCCTGCATCATCTCGATCCGAACAAGGGGGTTTTGCGCTATGCTTTTTGGCCGAGGTGG AGTGCCGACGGGAGGAATCTCTTGTGGTTTCGGTGGCCTTGGGGGAATGACTTCATGAAGGATGATTTTAGGCCG GGGGCCGAGGCTTGGCTGGCGGAGAACGCGGGGGGGTTGCACTTGTGA |
Gene | >Ophcf2|03697 ATGGAAGACCATCGACCTAGAGCTAAGCCCGGACTCCAAACTCACCGGCCGCTCGACCCCGACAACGGAATCTTT CCACGCAATCCCCTACGCCGATCCCCCCTCGGACCCCTCCGTCTCCGACCCCCCCGTCCGAGATCCCTCCCGCTG GGGAGCCGCGACGCCACCATCTCCGCCCCCGCCTGTCCGCAGATGCTCCTCTCCACCACGGCCACCGACATCTTC ACCAAGCTGGCCGGCAAGGCGCTAGACTCCCCGCTGCTCAGGGAGTATCGCGGACGGGAAGATTGCCTCACCCTC GACGTGCAGCGTCCGGCGGGCGTCGAGAGGGGCGCCAAGCTCCCCGTCCTCTTCTGGATATGGGGAGGGGCCTTT GCCTTTGGCGGGAGCGCAATGTACGACGCCACCAGCCTCCTGGAGCTCGCCCGGTCCCAGAACCAAGACTTCATC TTCGTCGCCATCAACCATCGGCTGGGCGGCTTCGGCTTCCTGCCCGGGAAGCAGGTGCTGGCCGACGGCAGCGCC AATCTCGGACTGTTGGATCAGAGGTTGGCGCTCGAGTGGGTGGCCGATAACATCGAGGCTTTCGGGGGGGATCCG GAAAAGGTCACCCTCTGGGGACTCTCTTCCGGTGGCATCTCCGTCTTCGATCAGATGCTCCTCTACGGCGGGAAC GCCACTTACAAGGGGAGGCCGCTGTTTCGAGCCGCCATCGTCAACTCGGGCGGTTCCGCGCCGGCGGAGCCCGTC GATGGCGTCAAGGGACAGGCCATCTACGACGCCGTCGCCGAGAGAGCGGGCTGTCTCGACACCACCGACTCGCTG ACCTGCCTCCGGAACAAAGACTACCCGACCCTCCTCGACGCCATGAACTCCGTCCCCGCCTTCTTCTCCTACTCG TCCATCGCCCTCTCCTACCTGCCCCGACCGGACGGCGTCGTCCTACCCGACAGTCCCGACCGGTTAGCCGAGCAG GGCCGCATCCACGCCGTGCCCGTCATCATGGGGAATCAGGAGGACGAGGGCACGACCATCGCCCTGTTCCAGTGG AACCTGACCTCGGCCGATGACCTCGCCGCCTATCTCTCCACCGCCCTCTTCCCTACCTTTCCGAGGCGGAAGCTG AAGGAGTACGTCGACCTCTACGACCCGCCCTTGCTACAGGGCTCCCCCCATCGAACGGGCCTCCTCAACGAGCTC TACCCGGGCTTCAAACGCGTGGCCGCCGTGCTGGGAGACCTGACCTTTACCCTCTCCCGCCGCATCCTGCTCCTG ACCCTCTCCCGCACCAAGCCGACGATGAAGGTCTGGTCCTACATCTCCTCCTACCACCACGCCATCCCCTTCCTG GGAACCTACCACGCCTCGGACGTGACGCAGGTCTTCTTCGGGGTGCCGGATAACTACGCGGCGCGGAGTTGCCGG ACGTATTACCTCAACTTCCTGCATCATCTCGATCCGAACAAGGGGGTTTTGCGCTATGCTTTTTGGCCGAGGTGG AGTGCCGACGGGAGGAATCTCTTGTGGTTTCGGTGGCCTTGGGGGAATGACTTCATGAAGGATGATTTTAGGCCG GGGGCCGAGGCTTGGCTGGCGGAGAACGCGGGGGGGTTGCACTTGTGA |