Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03687
Gene name
Locationscaffold_03:3542768..3544203
Strand-
Gene length (bp)1435
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 1.1E-32 98 308

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 98 120 22
2 135 157 22
3 164 186 22
4 210 232 22
5 272 294 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03687
MWHGGRPWAGRRRSVDAISSRGNGKERVQDLEAGQSSRMAEKIEPVTRPATRLGSDAELGKMDALQNLRTAQSVS
MSPELFEKLYLTPVNNKAGKLRMTFGNPAPLGLAGFIICLSPLSFDLMGWRGSGGQGNASLGAFWFQGGVLMVLA
SILEWVLGNTFPAVTFGVYGTFWWGFAAGQTPAFAVGSRYAPGRPIAEGLESRGFEASNAWWLLFMAIMSLLFFV
CALRTNIMLCTIYACLTVQFLLQCGSSLLLAENFEENRPRVRPLVKGAGALAFVAAMAGWYLLVAELLAAVDFPY
QLNVGHLSNLIKGKSQKGEGKIE*
Coding >Ophcf2|03687
ATGTGGCACGGAGGCAGACCATGGGCGGGACGCCGACGGTCTGTCGATGCCATTTCATCGAGGGGAAATGGAAAG
GAGCGTGTCCAAGATCTAGAAGCAGGACAATCCTCCAGAATGGCCGAGAAGATCGAGCCCGTTACCCGTCCGGCG
ACGAGGTTAGGTTCCGACGCCGAGCTGGGCAAGATGGACGCGCTGCAGAATCTACGGACGGCGCAAAGCGTCTCC
ATGAGCCCTGAGCTTTTCGAGAAGCTTTACCTTACCCCCGTGAATAACAAGGCTGGGAAGCTACGGATGACGTTT
GGCAATCCGGCGCCGCTGGGCCTTGCTGGGTTCATCATCTGTTTGAGTCCGCTTTCTTTCGATCTGATGGGGTGG
CGAGGCTCAGGCGGACAGGGAAACGCATCTCTAGGCGCCTTTTGGTTCCAGGGCGGCGTCCTGATGGTACTGGCC
AGCATCCTCGAATGGGTCCTCGGCAACACCTTTCCCGCCGTAACCTTTGGCGTCTACGGCACCTTTTGGTGGGGG
TTCGCTGCCGGACAGACGCCCGCCTTTGCCGTCGGGTCTCGGTATGCGCCTGGGAGGCCGATCGCCGAGGGCTTG
GAGTCTCGGGGGTTCGAAGCGAGTAATGCTTGGTGGTTGTTGTTCATGGCCATCATGAGCTTATTGTTCTTTGTT
TGCGCGCTTCGGACCAACATCATGCTATGCACCATCTACGCTTGTCTCACGGTTCAGTTTCTTCTCCAGTGCGGC
TCTTCGCTTCTCCTGGCCGAGAATTTCGAGGAGAACAGGCCGCGGGTGCGTCCGTTGGTCAAAGGAGCGGGAGCG
TTGGCGTTCGTGGCTGCCATGGCGGGGTGGTATCTTCTCGTCGCCGAGTTGCTTGCGGCCGTCGACTTTCCTTAC
CAGCTCAACGTCGGGCATTTGAGTAATTTGATCAAGGGGAAGAGCCAGAAGGGGGAGGGGAAGATTGAGTAG
Transcript >Ophcf2|03687
ATGTGGCACGGAGGCAGACCATGGGCGGGACGCCGACGGTCTGTCGATGCCATTTCATCGAGGGGAAATGGAAAG
GAGCGTGTCCAAGATCTAGAAGCAGGACAATCCTCCAGAATGGCCGAGAAGATCGAGCCCGTTACCCGTCCGGCG
ACGAGGTTAGGTTCCGACGCCGAGCTGGGCAAGATGGACGCGCTGCAGAATCTACGGACGGCGCAAAGCGTCTCC
ATGAGCCCTGAGCTTTTCGAGAAGCTTTACCTTACCCCCGTGAATAACAAGGCTGGGAAGCTACGGATGACGTTT
GGCAATCCGGCGCCGCTGGGCCTTGCTGGGTTCATCATCTGTTTGAGTCCGCTTTCTTTCGATCTGATGGGGTGG
CGAGGCTCAGGCGGACAGGGAAACGCATCTCTAGGCGCCTTTTGGTTCCAGGGCGGCGTCCTGATGGTACTGGCC
AGCATCCTCGAATGGGTCCTCGGCAACACCTTTCCCGCCGTAACCTTTGGCGTCTACGGCACCTTTTGGTGGGGG
TTCGCTGCCGGACAGACGCCCGCCTTTGCCGTCGGGTCTCGGTATGCGCCTGGGAGGCCGATCGCCGAGGGCTTG
GAGTCTCGGGGGTTCGAAGCGAGTAATGCTTGGTGGTTGTTGTTCATGGCCATCATGAGCTTATTGTTCTTTGTT
TGCGCGCTTCGGACCAACATCATGCTATGCACCATCTACGCTTGTCTCACGGTTCAGTTTCTTCTCCAGTGCGGC
TCTTCGCTTCTCCTGGCCGAGAATTTCGAGGAGAACAGGCCGCGGGTGCGTCCGTTGGTCAAAGGAGCGGGAGCG
TTGGCGTTCGTGGCTGCCATGGCGGGGTGGTATCTTCTCGTCGCCGAGTTGCTTGCGGCCGTCGACTTTCCTTAC
CAGCTCAACGTCGGGCATTTGAGTAATTTGATCAAGGGGAAGAGCCAGAAGGGGGAGGGGAAGATTGAGTAG
Gene >Ophcf2|03687
ATGTGGCACGGAGGCAGACCATGGGCGGGACGCCGACGGTCTGTCGATGCCATTTCATCGAGGGGAAATGGAAAG
GAGCGTGTCCAAGATCTAGGTTCGTCTCTGGCATTTCAAGTCTGACGCTCCCTTTGGAAAACTCAGCCCTTTGCT
TTTTTTTTTTCTTCTTTTGTTTCCCTTCATTATCCATACTCTGCAAAATTGTTTTTTTTTTTTTTTGTCGAATGA
ATCCTCTTCTCTTCTCTTAATCTCGTCATCTAATACTACCGGTCCTGGCTGATTCCCCCGCCAAAGAAGCAGGAC
AATCCTCCAGAATGGCCGAGAAGATCGAGCCCGTTACCCGTCCGGCGACGAGGTTAGGTTCCGACGCCGAGCTGG
GCAAGATGGACGCGCTGCAGAATCTACGGACGGCGCAAAGCGTCTCCATGAGCCCTGAGCTTTTCGAGAAGCTTT
ACCTTACCCCCGTGAATAACAAGGCTGGGAAGCTACGGATGACGTTTGGCAATCCGGCGCCGCTGTGAGTTTTTC
ATGGAATTGGATGCCGGGGGTTTGAGCTGATGGGTTCAGGGGCCTTGCTGGGTTCATCATCTGTTTGAGTCCGCT
TTCTTTCGATCTGATGGGGTGGCGAGGCTCAGGCGGACAGGGAAACGCATCTCTGTAAGCCCCCGTGTCGAATCT
CGATGCTCAACAGCACAGCTAAAACGATTGGCAGAGGCGCCTTTTGGTTCCAGGGCGGCGTCCTGATGGTACTGG
CCAGCATCCTCGAATGGGTCCTCGGCAACACCTTTCCCGCCGTAACCTTTGGCGTCTACGGCACCTTTTGGTGGG
GGTTCGCTGCCGGACAGACGCCCGCCTTTGCCGTCGGGTCTCGGTATGCGCCTGGGAGGCCGATCGCCGAGGGCT
TGGAGTCTCGGGGGTTCGAAGCGAGTAATGGTGAGTATCGAGGTGGGAAAGGAAAGTTGAAAGAGCAATGTTGCT
GATGCGGAGGTTTCAGCTTGGTGGTTGTTGTTCATGGCCATCATGAGCTTATTGTTCTTTGTTTGCGCGCTTCGG
ACCAACATCATGCTATGCACCATCTACGCTTGTCTCACGGTTCAGTTTCTTCTCCAGTGCGGCTCTTCGCTTCTC
CTGGCCGAGAATTTCGAGGAGAACAGGCCGCGGGTGCGTCCGTTGGTCAAAGTACGTCCCCCCGCTTCCCCATTC
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCTCTTCTCTTCTCAGGAGGATCTAACGTTGAGGCTGTCA
GGGAGCGGGAGCGTTGGCGTTCGTGGCTGCCATGGCGGGGTGGTATCTTCTCGTCGCCGAGTTGCTTGCGGCCGT
CGACTTTCCTTACCAGCTCAACGTCGGGCATTTGAGTAATTTGATCAAGGGGAAGAGCCAGAAGGGGGAGGGGAA
GATTGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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