Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03683
Gene name
Locationscaffold_03:3523195..3524584
Strand-
Gene length (bp)1389
Transcript length (bp)1233
Coding sequence length (bp)1233
Protein length (aa) 411

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 21 40 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03683
MAPPFDSYDRASSRRNPWTHWVPLAITLSVATVGVAAWVWSQRREDDGDLDEPGLDYDNADYGDNPPYGASTRDT
APAGRDEHEAPDPVVPGSGSGWGARVSDALRRTPSPQQLFDSTGKTVAAGVAAAGAVVGKALASIREEDKPYSDN
PWSEEADAKKDRGPPPALWNKKRKTVAIVVSADSNLSRHEEGVESHEHASILSHIPRHNDLSAIKLYVLIYAPEL
KDTALETTASNLPAASLSSSFSNIGHDQAQSPEAEAKASPPATSGGSPLFRAIYSQALGLVDKEAMILPFTTATG
HTHILRHIQPEIVYLQESMSGDNGSVIANLQTWLRHDVVLVVGADSGSGGLADSESETEKSEKWWQRPEKVGRGR
GIVVVDGVRVHDDWVRRVQGKEVCTRYKLQQAMLK*
Coding >Ophcf2|03683
ATGGCGCCGCCTTTCGACAGCTACGACCGCGCTTCTTCGCGACGCAACCCCTGGACACACTGGGTACCGCTCGCC
ATCACTCTCTCCGTCGCCACTGTCGGTGTGGCTGCTTGGGTATGGAGTCAGCGACGCGAGGACGACGGCGACTTG
GACGAGCCGGGTCTAGACTACGATAATGCCGACTACGGTGACAATCCGCCCTATGGCGCCTCTACTCGCGATACC
GCCCCTGCAGGACGCGATGAACATGAAGCACCAGACCCTGTGGTACCCGGTTCCGGCTCCGGCTGGGGCGCTCGC
GTATCGGACGCGCTACGGCGGACTCCGAGCCCGCAGCAGCTGTTTGACTCGACCGGCAAGACGGTTGCTGCGGGT
GTAGCTGCTGCGGGCGCTGTCGTTGGCAAGGCCTTGGCTTCTATCCGCGAAGAGGACAAGCCTTACTCCGATAAC
CCCTGGTCTGAGGAGGCCGACGCGAAAAAGGATCGAGGACCACCCCCGGCGTTGTGGAACAAGAAGCGCAAGACC
GTTGCCATCGTTGTATCTGCCGATTCTAACCTCTCTCGCCATGAGGAAGGGGTCGAGTCTCATGAACACGCATCG
ATCCTGTCGCATATACCACGCCATAACGACCTTTCAGCCATTAAGCTGTACGTCTTGATCTACGCACCCGAGCTC
AAGGATACGGCGCTGGAAACGACGGCTAGCAACCTACCCGCCGCGTCTCTGAGCTCGTCCTTTTCCAATATCGGC
CATGACCAGGCGCAGAGCCCCGAGGCAGAAGCAAAGGCGTCGCCTCCCGCGACCTCTGGCGGCAGCCCCTTGTTT
CGAGCAATCTATTCGCAGGCGCTCGGACTCGTAGACAAGGAGGCCATGATTCTCCCCTTTACCACGGCGACAGGA
CACACGCACATACTTCGTCACATCCAGCCTGAGATTGTCTATCTGCAGGAGTCGATGAGCGGCGATAATGGAAGC
GTCATCGCGAACCTTCAGACGTGGCTGCGGCATGATGTCGTCTTAGTCGTCGGAGCCGACAGCGGGTCGGGCGGA
CTTGCGGACAGCGAGTCGGAGACGGAGAAGAGCGAAAAGTGGTGGCAGAGACCGGAAAAGGTCGGCCGCGGGCGT
GGCATCGTCGTCGTCGACGGCGTCCGTGTTCATGACGACTGGGTTCGGCGGGTGCAAGGCAAAGAAGTATGCACG
CGCTACAAGCTTCAGCAGGCCATGCTCAAGTGA
Transcript >Ophcf2|03683
ATGGCGCCGCCTTTCGACAGCTACGACCGCGCTTCTTCGCGACGCAACCCCTGGACACACTGGGTACCGCTCGCC
ATCACTCTCTCCGTCGCCACTGTCGGTGTGGCTGCTTGGGTATGGAGTCAGCGACGCGAGGACGACGGCGACTTG
GACGAGCCGGGTCTAGACTACGATAATGCCGACTACGGTGACAATCCGCCCTATGGCGCCTCTACTCGCGATACC
GCCCCTGCAGGACGCGATGAACATGAAGCACCAGACCCTGTGGTACCCGGTTCCGGCTCCGGCTGGGGCGCTCGC
GTATCGGACGCGCTACGGCGGACTCCGAGCCCGCAGCAGCTGTTTGACTCGACCGGCAAGACGGTTGCTGCGGGT
GTAGCTGCTGCGGGCGCTGTCGTTGGCAAGGCCTTGGCTTCTATCCGCGAAGAGGACAAGCCTTACTCCGATAAC
CCCTGGTCTGAGGAGGCCGACGCGAAAAAGGATCGAGGACCACCCCCGGCGTTGTGGAACAAGAAGCGCAAGACC
GTTGCCATCGTTGTATCTGCCGATTCTAACCTCTCTCGCCATGAGGAAGGGGTCGAGTCTCATGAACACGCATCG
ATCCTGTCGCATATACCACGCCATAACGACCTTTCAGCCATTAAGCTGTACGTCTTGATCTACGCACCCGAGCTC
AAGGATACGGCGCTGGAAACGACGGCTAGCAACCTACCCGCCGCGTCTCTGAGCTCGTCCTTTTCCAATATCGGC
CATGACCAGGCGCAGAGCCCCGAGGCAGAAGCAAAGGCGTCGCCTCCCGCGACCTCTGGCGGCAGCCCCTTGTTT
CGAGCAATCTATTCGCAGGCGCTCGGACTCGTAGACAAGGAGGCCATGATTCTCCCCTTTACCACGGCGACAGGA
CACACGCACATACTTCGTCACATCCAGCCTGAGATTGTCTATCTGCAGGAGTCGATGAGCGGCGATAATGGAAGC
GTCATCGCGAACCTTCAGACGTGGCTGCGGCATGATGTCGTCTTAGTCGTCGGAGCCGACAGCGGGTCGGGCGGA
CTTGCGGACAGCGAGTCGGAGACGGAGAAGAGCGAAAAGTGGTGGCAGAGACCGGAAAAGGTCGGCCGCGGGCGT
GGCATCGTCGTCGTCGACGGCGTCCGTGTTCATGACGACTGGGTTCGGCGGGTGCAAGGCAAAGAAGTATGCACG
CGCTACAAGCTTCAGCAGGCCATGCTCAAGTGA
Gene >Ophcf2|03683
ATGGCGCCGCCTTTCGACAGCTACGACCGCGCTTCTTCGCGACGCAACCCCTGGACACACTGGGTACCGCTCGCC
ATCACTCTCTCCGTCGCCACTGTCGGTGTGGCTGCTTGGGTATGGAGTCAGCGACGCGAGGACGACGGCGACTTG
GACGAGCCGGGTCTAGACTACGATAATGCCGACTACGGTGACAATCCGCCCTATGGCGCCTCTACTCGCGATACC
GCCCCTGCAGGACGCGATGAACATGAAGCACCAGACCCTGTGGTACCCGGTTCCGGCTCCGGCTGGGGCGCTCGC
GTATCGGACGCGCTACGGCGGACTCCGAGCCCGCAGCAGCTGTTTGACTCGACCGGCAAGACGGTTGCTGCGGGT
GTAGCTGCTGCGGGCGCTGTCGTTGGCAAGGCCTTGGCTTCTATCCGCGAAGAGGACAAGCCTTACTCCGATAAC
CCCTGGTCTGAGGAGGCCGACGCGAAAAAGGATCGAGGACCACCCCCGGCGTTGTGGAACAAGAAGCGCAAGACC
GTTGCCATCGTTGTATCTGCCGATTCTAACCTCTCTCGCCATGAGGAAGGGGTCGAGTCTCATGAACACGCAGTG
AGTCCTTCATCTTTAATGCCCGCAGTCTTTGCTGACTGAGTGGTGCAGTCGATCCTGTCGCATATACCACGCCAT
AACGACCTTTCAGCCATTAAGCTGTACGTCTTGATCTACGCACCCGAGCTCAAGGATACGGCGCTGGAAACGACG
GCTAGCAACCTACCCGCCGCGTCTCTGAGCTCGTCCTTTTCCAATATCGGCCATGACCAGGCGCAGAGCCCCGAG
GCAGAAGCAAAGGCGTCGCCGTGAGGACACCTCCCAATGGTCTATCTGTCAGTAATGACGCTGATATGCTCCAGT
CCCGCGACCTCTGGCGGCAGCCCCTTGTTTCGAGCAATCTATTCGCAGGCGCTCGGACTCGTAGACAAGGAGGCC
ATGATTCTCCCCTTTACCACGGCGACAGGACACACGCACATACTTCGTCACATCCAGCCTGAGATTGTCTATCTG
CAGGAGTCGATGAGCGGCGATAATGGAAGCGTCATCGCGAACCTTCAGACGTGGCTGCGGCATGATGTCGTCTTA
GTCGTCGGAGCCGACAGCGGGTCGGGCGGACTTGCGGACAGCGAGTCGGAGACGGAGAAGAGCGAAAAGTGGTGG
CAGAGACCGGAAAAGGTCGGCCGCGGGCGTGGCATCGTCGTCGTCGACGGCGTCCGTGTTCATGACGACTGGGTT
CGGCGGGTGCAAGGCAAAGAGTGAGAGGGATCCAGGAGCCCAAAGAGGTGATTTGACTCCATGACTCGCAGAGTA
TGCACGCGCTACAAGCTTCAGCAGGCCATGCTCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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