Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03659
Gene name
Locationscaffold_03:3446665..3448142
Strand-
Gene length (bp)1477
Transcript length (bp)1362
Coding sequence length (bp)1362
Protein length (aa) 454

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06870 RNA_pol_I_A49 A49-like RNA polymerase I associated factor 9.7E-79 108 446

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0009058 biosynthetic process No
GO:0005488 binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2681 0.8911 0.2469 0.0163 0.0844 0.0065 0.0122 0.0175 0.0134 0.0042

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1850
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3824
Ophiocordyceps australis map64 (Brazil) OphauB2|6767
Ophiocordyceps camponoti-floridani Ophcf2|03659 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5749
Ophiocordyceps kimflemingae Ophio5|777
Ophiocordyceps subramaniannii Hirsu2|1866

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03659
MGEKSSKKRKRDVEPSSSEVSSSSEDESSSEASSSDEESSSQDSSSDDGSPKKAVKRVSFKDKPSTNNVPPLLRT
GDCPPLIVTAPGIELSSSIALRCNPPRELKSGLRDDQELLFRSEQHPTLEYVAREEEPDGQHFLGIYDEKTGKME
LVKARKIEVRVRSRDVAEVEYQDKSLEDRRTDLTQTFGTKKAKKAISEQTLETITPAKPGAKPTAAMKATIAAIK
AATADMATPEQLQAAVASAKPVPKVNSEATTIEQAYDVEAIIGRDVLHLVPIHDWQEKARAGESVGTPSRFVSAR
LNNLAMDDSTMGHLRILRYLELLIRFYRTTKAASREGGRQLLPRSELGNALSPAPDAVIENIRRKFSNGTSMTKF
HVQLLTTHCCLFALVIDGYETITQQLREDLRVVDDQTMKQFYLEIGATAKAVKVKGQRMQVATLALPLKFPKQRR
VRR*
Coding >Ophcf2|03659
ATGGGCGAGAAAAGCAGCAAAAAGCGCAAGCGGGACGTCGAGCCTTCCAGTTCAGAAGTATCGTCTAGCTCAGAA
GATGAATCGTCCAGCGAGGCTAGCAGCTCAGACGAGGAGTCTTCCAGCCAAGACAGCAGCTCGGACGACGGATCG
CCCAAGAAGGCTGTGAAACGAGTCTCGTTCAAAGACAAGCCCTCTACCAACAATGTCCCTCCCCTCTTGCGGACG
GGCGACTGTCCTCCTCTCATAGTGACGGCGCCCGGCATCGAGCTGTCGTCTTCTATAGCCCTTCGGTGCAATCCA
CCTCGTGAGCTCAAGAGTGGCCTGAGAGACGACCAAGAGCTACTCTTTCGTTCTGAGCAGCATCCGACGCTCGAG
TATGTGGCGCGAGAGGAGGAGCCGGATGGGCAACACTTCCTCGGCATCTACGATGAGAAAACCGGAAAGATGGAG
CTGGTCAAGGCCAGAAAGATTGAAGTGCGGGTCAGATCGCGCGATGTCGCCGAGGTTGAGTATCAGGACAAGTCA
CTCGAGGACCGCAGAACGGACTTGACCCAGACATTCGGCACCAAGAAGGCGAAGAAGGCAATCAGTGAACAGACA
CTCGAAACCATCACCCCTGCGAAACCCGGAGCTAAACCGACGGCGGCCATGAAGGCGACGATTGCCGCCATCAAA
GCCGCTACAGCCGACATGGCCACGCCTGAGCAGCTGCAGGCAGCCGTGGCCAGCGCCAAACCGGTGCCAAAGGTC
AATTCGGAGGCGACGACAATCGAGCAAGCCTACGACGTGGAGGCCATCATTGGCAGAGATGTCCTCCACCTGGTG
CCCATCCACGACTGGCAAGAAAAGGCACGGGCGGGAGAGTCAGTCGGCACACCATCTCGCTTCGTCTCTGCTCGT
CTCAACAATCTGGCAATGGACGACTCGACCATGGGCCATCTCCGGATCCTGCGCTACCTCGAGCTCCTCATCCGC
TTCTACCGCACGACAAAGGCAGCCTCCCGCGAAGGCGGAAGACAGCTCCTCCCCCGCTCCGAACTCGGCAATGCC
CTGAGTCCCGCCCCCGACGCCGTCATCGAGAACATCCGTCGCAAGTTCTCAAACGGGACGTCGATGACCAAGTTC
CACGTTCAGCTTTTGACGACGCACTGCTGTCTCTTTGCCCTTGTCATCGACGGCTACGAGACGATTACGCAGCAG
TTGCGCGAGGATCTGCGGGTGGTGGATGATCAGACGATGAAGCAGTTCTATCTCGAGATTGGGGCTACTGCCAAG
GCGGTCAAGGTTAAGGGGCAGAGGATGCAGGTTGCTACGTTGGCGTTGCCCCTCAAGTTTCCTAAGCAGCGGCGG
GTACGTCGGTAG
Transcript >Ophcf2|03659
ATGGGCGAGAAAAGCAGCAAAAAGCGCAAGCGGGACGTCGAGCCTTCCAGTTCAGAAGTATCGTCTAGCTCAGAA
GATGAATCGTCCAGCGAGGCTAGCAGCTCAGACGAGGAGTCTTCCAGCCAAGACAGCAGCTCGGACGACGGATCG
CCCAAGAAGGCTGTGAAACGAGTCTCGTTCAAAGACAAGCCCTCTACCAACAATGTCCCTCCCCTCTTGCGGACG
GGCGACTGTCCTCCTCTCATAGTGACGGCGCCCGGCATCGAGCTGTCGTCTTCTATAGCCCTTCGGTGCAATCCA
CCTCGTGAGCTCAAGAGTGGCCTGAGAGACGACCAAGAGCTACTCTTTCGTTCTGAGCAGCATCCGACGCTCGAG
TATGTGGCGCGAGAGGAGGAGCCGGATGGGCAACACTTCCTCGGCATCTACGATGAGAAAACCGGAAAGATGGAG
CTGGTCAAGGCCAGAAAGATTGAAGTGCGGGTCAGATCGCGCGATGTCGCCGAGGTTGAGTATCAGGACAAGTCA
CTCGAGGACCGCAGAACGGACTTGACCCAGACATTCGGCACCAAGAAGGCGAAGAAGGCAATCAGTGAACAGACA
CTCGAAACCATCACCCCTGCGAAACCCGGAGCTAAACCGACGGCGGCCATGAAGGCGACGATTGCCGCCATCAAA
GCCGCTACAGCCGACATGGCCACGCCTGAGCAGCTGCAGGCAGCCGTGGCCAGCGCCAAACCGGTGCCAAAGGTC
AATTCGGAGGCGACGACAATCGAGCAAGCCTACGACGTGGAGGCCATCATTGGCAGAGATGTCCTCCACCTGGTG
CCCATCCACGACTGGCAAGAAAAGGCACGGGCGGGAGAGTCAGTCGGCACACCATCTCGCTTCGTCTCTGCTCGT
CTCAACAATCTGGCAATGGACGACTCGACCATGGGCCATCTCCGGATCCTGCGCTACCTCGAGCTCCTCATCCGC
TTCTACCGCACGACAAAGGCAGCCTCCCGCGAAGGCGGAAGACAGCTCCTCCCCCGCTCCGAACTCGGCAATGCC
CTGAGTCCCGCCCCCGACGCCGTCATCGAGAACATCCGTCGCAAGTTCTCAAACGGGACGTCGATGACCAAGTTC
CACGTTCAGCTTTTGACGACGCACTGCTGTCTCTTTGCCCTTGTCATCGACGGCTACGAGACGATTACGCAGCAG
TTGCGCGAGGATCTGCGGGTGGTGGATGATCAGACGATGAAGCAGTTCTATCTCGAGATTGGGGCTACTGCCAAG
GCGGTCAAGGTTAAGGGGCAGAGGATGCAGGTTGCTACGTTGGCGTTGCCCCTCAAGTTTCCTAAGCAGCGGCGG
GTACGTCGGTAG
Gene >Ophcf2|03659
ATGGGCGAGAAAAGCAGCAAAAAGCGCAAGCGGGACGTCGAGCCTTCCAGTTCAGAAGTATCGTCTAGCTCAGAA
GATGAATCGTCCAGCGAGGCTAGCAGCTCAGACGAGGAGTCTTCCAGCCAAGACAGCAGCTCGGACGACGGATCG
CCCAAGAAGGCTGTGAAACGAGTCTCGTTCAAAGACAAGCCCTCTACCAACAATGTCCCTCCCCTCTTGCGGACG
GGCGACTGTCCTCCTCTCATAGGTAACCACGCGAAAGCTCTCTGTCCTGTCGAGGCCTGGTCTGACGTCTTTGAC
AGTGACGGCGCCCGGCATCGAGCTGTCGTCTTCTATAGCCCTTCGGTGCAATCCACCTCGTGAGCTCAAGAGTGG
CCTGAGAGACGACCAAGAGCTACTCTTTCGTTCTGAGCAGCATCCGACGCTCGAGTATGTGGCGCGAGAGGAGGA
GCCGGATGGGCAACACTTCCTCGGCATCTACGATGAGAAAACCGGAAAGATGGAGCTGGTCAAGGCCAGAAAGAT
TGAAGTGCGGGTCAGATCGCGCGATGTCGCCGAGGTTGAGTATCAGGACAAGGTGAGCCCACGTACCACTGTGAC
TTTGAAAGGGCAGACACGCTAAGCAGTGTCGTTACAGTCACTCGAGGACCGCAGAACGGACTTGACCCAGACATT
CGGCACCAAGAAGGCGAAGAAGGCAATCAGTGAACAGACACTCGAAACCATCACCCCTGCGAAACCCGGAGCTAA
ACCGACGGCGGCCATGAAGGCGACGATTGCCGCCATCAAAGCCGCTACAGCCGACATGGCCACGCCTGAGCAGCT
GCAGGCAGCCGTGGCCAGCGCCAAACCGGTGCCAAAGGTCAATTCGGAGGCGACGACAATCGAGCAAGCCTACGA
CGTGGAGGCCATCATTGGCAGAGATGTCCTCCACCTGGTGCCCATCCACGACTGGCAAGAAAAGGCACGGGCGGG
AGAGTCAGTCGGCACACCATCTCGCTTCGTCTCTGCTCGTCTCAACAATCTGGCAATGGACGACTCGACCATGGG
CCATCTCCGGATCCTGCGCTACCTCGAGCTCCTCATCCGCTTCTACCGCACGACAAAGGCAGCCTCCCGCGAAGG
CGGAAGACAGCTCCTCCCCCGCTCCGAACTCGGCAATGCCCTGAGTCCCGCCCCCGACGCCGTCATCGAGAACAT
CCGTCGCAAGTTCTCAAACGGGACGTCGATGACCAAGTTCCACGTTCAGCTTTTGACGACGCACTGCTGTCTCTT
TGCCCTTGTCATCGACGGCTACGAGACGATTACGCAGCAGTTGCGCGAGGATCTGCGGGTGGTGGATGATCAGAC
GATGAAGCAGTTCTATCTCGAGATTGGGGCTACTGCCAAGGCGGTCAAGGTTAAGGGGCAGAGGATGCAGGTTGC
TACGTTGGCGTTGCCCCTCAAGTTTCCTAAGCAGCGGCGGGTACGTCGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail