Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03609
Gene name
Locationscaffold_03:3281451..3282279
Strand-
Gene length (bp)828
Transcript length (bp)744
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 143 165 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03609
MAQAPITTIPPFADTAKLPDCARACGPLYDANGACVPPAAPQSDPAAYTACFCSHAKVAPFSKGTAGVCDAACTA
NQAGLQSIAGWFQSICKSPSQPPPPNNNNNNNNGNVRQNNNGAGGSSPVSPVVPANNGGGDWLSHHWQWVIMLVI
LVVGIAGIWIGACVWRRRYLRNKDQLLLNQKHQPESAAAAAVPAAAATTGTPSWGPVIPPSESHAPMTFLADSER
SFTAEKAGSPKDKLKWTVTERT*
Coding >Ophcf2|03609
ATGGCCCAAGCCCCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTGCCCGACTGCGCCAGAGCCTGC
GGTCCCCTCTACGACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGTCTGACCCGGCCGCCTACACGGCT
TGCTTCTGCAGCCATGCCAAGGTCGCTCCCTTCTCCAAGGGCACCGCCGGAGTCTGTGACGCCGCCTGTACCGCC
AACCAGGCCGGCCTCCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAATCTCCCTCTCAACCACCCCCCCCG
AACAACAACAACAACAACAACAACGGCAACGTCCGCCAGAACAACAACGGCGCCGGCGGATCCTCCCCCGTCTCC
CCCGTCGTCCCCGCCAACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATGCTCGTCATC
CTCGTCGTCGGCATCGCCGGCATCTGGATAGGAGCTTGCGTTTGGCGACGCCGATACCTCCGCAACAAGGACCAG
CTCCTCCTCAACCAGAAGCACCAGCCCGAATCTGCCGCCGCCGCCGCCGTCCCCGCCGCCGCTGCCACCACCGGC
ACCCCTTCCTGGGGACCCGTCATACCCCCTTCCGAATCCCACGCGCCCATGACCTTCTTGGCCGACTCGGAGCGC
TCTTTTACCGCCGAAAAGGCCGGTAGTCCGAAGGACAAGCTGAAGTGGACCGTCACCGAGCGCACTTGA
Transcript >Ophcf2|03609
ATGGCCCAAGCCCCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTGCCCGACTGCGCCAGAGCCTGC
GGTCCCCTCTACGACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGTCTGACCCGGCCGCCTACACGGCT
TGCTTCTGCAGCCATGCCAAGGTCGCTCCCTTCTCCAAGGGCACCGCCGGAGTCTGTGACGCCGCCTGTACCGCC
AACCAGGCCGGCCTCCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAATCTCCCTCTCAACCACCCCCCCCG
AACAACAACAACAACAACAACAACGGCAACGTCCGCCAGAACAACAACGGCGCCGGCGGATCCTCCCCCGTCTCC
CCCGTCGTCCCCGCCAACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATGCTCGTCATC
CTCGTCGTCGGCATCGCCGGCATCTGGATAGGAGCTTGCGTTTGGCGACGCCGATACCTCCGCAACAAGGACCAG
CTCCTCCTCAACCAGAAGCACCAGCCCGAATCTGCCGCCGCCGCCGCCGTCCCCGCCGCCGCTGCCACCACCGGC
ACCCCTTCCTGGGGACCCGTCATACCCCCTTCCGAATCCCACGCGCCCATGACCTTCTTGGCCGACTCGGAGCGC
TCTTTTACCGCCGAAAAGGCCGGTAGTCCGAAGGACAAGCTGAAGTGGACCGTCACCGAGCGCACTTGA
Gene >Ophcf2|03609
ATGGGTAAGCAAAAAGCATCCCCAATCCCCAATCCCTCTTCCCTCTACCGCCCTCGCTGACATCAATGCCCGCCT
TCCCACCTCACAGCCCAAGCCCCCATCACCACCATCCCCCCCTTCGCCGACACGGCCAAACTGCCCGACTGCGCC
AGAGCCTGCGGTCCCCTCTACGACGCAAACGGCGCCTGCGTCCCTCCCGCCGCCCCTCAGTCTGACCCGGCCGCC
TACACGGCTTGCTTCTGCAGCCATGCCAAGGTCGCTCCCTTCTCCAAGGGCACCGCCGGAGTCTGTGACGCCGCC
TGTACCGCCAACCAGGCCGGCCTCCAGTCCATCGCCGGCTGGTTCCAGTCCATCTGCAAATCTCCCTCTCAACCA
CCCCCCCCGAACAACAACAACAACAACAACAACGGCAACGTCCGCCAGAACAACAACGGCGCCGGCGGATCCTCC
CCCGTCTCCCCCGTCGTCCCCGCCAACAACGGAGGCGGAGACTGGCTCTCCCACCACTGGCAATGGGTCATCATG
CTCGTCATCCTCGTCGTCGGCATCGCCGGCATCTGGATAGGAGCTTGCGTTTGGCGACGCCGATACCTCCGCAAC
AAGGACCAGCTCCTCCTCAACCAGAAGCACCAGCCCGAATCTGCCGCCGCCGCCGCCGTCCCCGCCGCCGCTGCC
ACCACCGGCACCCCTTCCTGGGGACCCGTCATACCCCCTTCCGAATCCCACGCGCCCATGACCTTCTTGGCCGAC
TCGGAGCGCTCTTTTACCGCCGAAAAGGCCGGTAGTCCGAAGGACAAGCTGAAGTGGACCGTCACCGAGCGCACT
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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