Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03607
Gene name
Locationscaffold_03:3273724..3274814
Strand+
Gene length (bp)1090
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 3.2E-10 24 110
PF05368 NmrA NmrA-like family 4.5E-10 20 124
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.6E-04 21 88

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6143 0.2924 0.1435 0.0548 0.1415 0.0147 0.0374 0.0918 0.0867 0.0509

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6266
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03607 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3548
Ophiocordyceps kimflemingae Ophio5|33
Ophiocordyceps subramaniannii Hirsu2|7989

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03607
MTAKYAKDQPADFTNRIERVAIVGATGKVGSYMTKELLSTGKHVLTAITRKGGGSSMPKGVKVAEVDYDREETLV
EALRGQQFLVVSLSVQAPAETQDKLARAAAKAGVSWMMPNCYGTDVRNVALEKENLSGPPILAGIAAAEKAGVSW
VTMCCSFWYDYSLAMGPGWFGFDFDKKEVTMIDEGKTRINVSTWDLCGRAIKALLSLKELPDDEADKSVTLSRWR
DQPLYISSFLIGQRDMLDSIHRVQGTTDADWRIEHEESSARYKRGMELMQKGNFVGFGMCLYTRTFYPNGDGNFG
AKYGLANEALGLPKEDLDEATKRTLASLDDFRRDPVYVKAYGQS*
Coding >Ophcf2|03607
ATGACGGCCAAGTACGCAAAGGACCAGCCAGCCGACTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGGGCC
ACGGGCAAGGTCGGCAGTTACATGACCAAGGAGCTGCTATCGACTGGTAAGCATGTCTTGACGGCCATCACGCGC
AAGGGCGGCGGTAGCAGTATGCCCAAAGGCGTCAAGGTGGCCGAAGTCGACTACGACCGCGAGGAGACGCTGGTC
GAGGCCCTCCGTGGACAGCAGTTCCTGGTCGTGTCGCTCTCGGTGCAGGCGCCGGCCGAGACGCAGGACAAGCTG
GCGCGGGCGGCGGCCAAGGCGGGCGTGTCGTGGATGATGCCCAACTGCTACGGCACCGACGTGCGAAACGTCGCG
CTGGAGAAGGAGAACCTATCCGGCCCTCCGATCCTGGCGGGCATCGCGGCGGCCGAGAAGGCGGGCGTATCGTGG
GTGACCATGTGTTGCTCGTTCTGGTACGACTATTCGCTGGCCATGGGGCCCGGCTGGTTTGGCTTCGACTTTGAT
AAAAAGGAGGTGACGATGATTGACGAGGGGAAGACGCGCATCAACGTCTCTACCTGGGATCTGTGCGGCCGGGCC
ATCAAGGCGCTGCTGAGCCTCAAGGAGCTTCCCGACGACGAGGCGGACAAGTCAGTGACGTTATCCCGCTGGCGC
GACCAGCCGCTATACATCTCGAGCTTCCTCATCGGCCAGCGGGATATGCTGGACAGCATCCACCGTGTTCAGGGC
ACGACGGATGCCGACTGGCGCATCGAGCACGAGGAGAGTTCGGCTCGTTATAAGCGTGGGATGGAGCTGATGCAA
AAGGGCAACTTTGTCGGCTTCGGCATGTGTCTCTATACCCGGACCTTTTATCCAAATGGGGACGGCAACTTCGGG
GCCAAATATGGGCTTGCTAACGAGGCGCTGGGGTTGCCCAAGGAGGATCTTGACGAGGCGACGAAGAGGACCCTG
GCTTCGCTGGATGACTTTCGGCGCGATCCGGTGTATGTGAAGGCGTATGGTCAGTCTTGA
Transcript >Ophcf2|03607
ATGACGGCCAAGTACGCAAAGGACCAGCCAGCCGACTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGGGCC
ACGGGCAAGGTCGGCAGTTACATGACCAAGGAGCTGCTATCGACTGGTAAGCATGTCTTGACGGCCATCACGCGC
AAGGGCGGCGGTAGCAGTATGCCCAAAGGCGTCAAGGTGGCCGAAGTCGACTACGACCGCGAGGAGACGCTGGTC
GAGGCCCTCCGTGGACAGCAGTTCCTGGTCGTGTCGCTCTCGGTGCAGGCGCCGGCCGAGACGCAGGACAAGCTG
GCGCGGGCGGCGGCCAAGGCGGGCGTGTCGTGGATGATGCCCAACTGCTACGGCACCGACGTGCGAAACGTCGCG
CTGGAGAAGGAGAACCTATCCGGCCCTCCGATCCTGGCGGGCATCGCGGCGGCCGAGAAGGCGGGCGTATCGTGG
GTGACCATGTGTTGCTCGTTCTGGTACGACTATTCGCTGGCCATGGGGCCCGGCTGGTTTGGCTTCGACTTTGAT
AAAAAGGAGGTGACGATGATTGACGAGGGGAAGACGCGCATCAACGTCTCTACCTGGGATCTGTGCGGCCGGGCC
ATCAAGGCGCTGCTGAGCCTCAAGGAGCTTCCCGACGACGAGGCGGACAAGTCAGTGACGTTATCCCGCTGGCGC
GACCAGCCGCTATACATCTCGAGCTTCCTCATCGGCCAGCGGGATATGCTGGACAGCATCCACCGTGTTCAGGGC
ACGACGGATGCCGACTGGCGCATCGAGCACGAGGAGAGTTCGGCTCGTTATAAGCGTGGGATGGAGCTGATGCAA
AAGGGCAACTTTGTCGGCTTCGGCATGTGTCTCTATACCCGGACCTTTTATCCAAATGGGGACGGCAACTTCGGG
GCCAAATATGGGCTTGCTAACGAGGCGCTGGGGTTGCCCAAGGAGGATCTTGACGAGGCGACGAAGAGGACCCTG
GCTTCGCTGGATGACTTTCGGCGCGATCCGGTGTATGTGAAGGCGTATGGTCAGTCTTGA
Gene >Ophcf2|03607
ATGACGGCCAAGTACGCAAAGGACCAGCCAGCCGACTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGGGTA
AAGCATTACAGCCCGTCTTCGCTCCGGCTGGGTAGGGAGCTGACCGGAACAGGCCACGGGCAAGGTCGGCAGTTA
CATGACCAAGGAGCTGCTATCGACTGGTAAGCATGTCTTGACGGCCATCACGCGCAAGGGCGGCGGTAGCAGTAT
GCCCAAAGGCGTCAAGGTGGCCGAAGTCGACTACGACCGCGAGGAGACGCTGGTCGAGGCCCTCCGTGGACAGCA
GTTCCTGGTCGTGTCGCTCTCGGTGCAGGCGCCGGCCGAGACGCAGGACAAGCTGGCGCGGGCGGCGGCCAAGGC
GGGCGTGTCGTGGATGATGCCCAACTGCTACGGCACCGACGTGCGAAACGTCGCGCTGGAGAAGGAGAACCTATC
CGGCCCTCCGATCCTGGCGGGCATCGCGGCGGCCGAGAAGGCGGGCGTATCGTGGGTGACCATGTGTTGCTCGTT
CTGGTACGACTATTCGCTGGCCATGGGGCCCGGCTGGTTTGGCTTCGACTTTGATAAAAAGGAGGTGACGATGAT
TGACGAGGGGAAGACGCGCATCAACGTCTCTACCTGGGATCTGTGCGGCCGGGCCATCAAGGCGCTGCTGAGCCT
CAAGGAGCTTCCCGACGACGAGGCGGACAAGTCAGTGACGTTATCCCGCTGGCGCGACCAGCCGCTATACATCTC
GAGCTTCCTCATCGGCCAGCGGGATATGCTGGACAGCATCCACCGTGTTCAGGGCACGACGGATGCCGACTGGCG
CATCGAGCACGAGGAGAGTTCGGCTCGTTATAAGCGTGGGATGGAGCTGATGCAAAAGGGCAACTTTGTCGGCTT
CGGCATGTGTCTCTATACCCGGACCTTTTATCCAAATGGGGACGGCAACTTCGGGGCCAAATATGGGCTTGCTAA
CGAGGCGCTGGGGTTGCCCAAGGAGGATCTTGACGAGGCGACGAAGAGGACCCTGGCTTCGCTGGATGACTTTCG
GCGCGATCCGGTGTATGTGAAGGCGTATGGTCAGTCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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