Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03604
Gene name
Locationscaffold_03:3269452..3270412
Strand+
Gene length (bp)960
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13772 AIG2_2 AIG2-like family 3.8E-08 127 221

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 238 260 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03604
MSSTTQLICPAPAPAALDDRLGPLPAPSLPRTSWKRLSQASNPDPSRGGPTTVLYLAYGSNMAAATFLGMRGIKP
ISQVNVSVPSLRLTFGLRGVPYWEPCFANVGFRDGSEKPALDDWDGRWDGRLMGVVYEVTPSDFGVIMRTEGAGS
SYKEITVPCIPIKSGPGQHDRQPFMARTLYAPQDWTDEPRHDGAQPSLRYLNLLRDGAREHGLPESYQRYLGSLE
AYTITHWRQRVGRFLLLLLWSPMLLVLIKVMGLMADETGRVPAGMATAMSTWFNFMWRSYEIVFKPLFGDGERSE
AEEDGGELESYKLPSFQSV*
Coding >Ophcf2|03604
ATGTCTTCAACCACTCAGTTGATATGCCCGGCTCCGGCTCCGGCGGCCCTCGACGACCGCCTGGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGACTCTCGCAGGCGTCCAACCCGGATCCCAGTCGAGGCGGCCCG
ACGACGGTGCTCTACCTTGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATTTCCCAAGTCAACGTCTCGGTCCCTAGCCTTCGCCTCACCTTTGGCCTGCGCGGCGTGCCTTATTGGGAGCCT
TGCTTCGCCAACGTCGGCTTCAGAGACGGATCGGAAAAGCCAGCCCTCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGGACCGAGGGCGCCGGCTCC
AGCTACAAGGAGATCACGGTTCCGTGCATTCCCATCAAAAGCGGGCCAGGGCAGCATGACAGGCAGCCTTTTATG
GCGAGGACTCTGTATGCTCCGCAGGACTGGACAGACGAGCCCAGACACGATGGCGCCCAGCCCAGCCTGCGATAC
CTCAATCTCCTCCGCGACGGCGCACGCGAGCACGGGCTTCCGGAGAGCTATCAGAGATATCTGGGGTCGTTGGAA
GCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTACTA
GTCCTGATCAAGGTCATGGGCTTAATGGCGGACGAGACCGGTAGGGTACCAGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATTTCATGTGGAGGAGCTACGAAATCGTCTTTAAGCCCCTATTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGAGGATGGAGGAGAGCTTGAGTCGTACAAGCTACCGAGCTTCCAGTCGGTCTGA
Transcript >Ophcf2|03604
ATGTCTTCAACCACTCAGTTGATATGCCCGGCTCCGGCTCCGGCGGCCCTCGACGACCGCCTGGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGACTCTCGCAGGCGTCCAACCCGGATCCCAGTCGAGGCGGCCCG
ACGACGGTGCTCTACCTTGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATTTCCCAAGTCAACGTCTCGGTCCCTAGCCTTCGCCTCACCTTTGGCCTGCGCGGCGTGCCTTATTGGGAGCCT
TGCTTCGCCAACGTCGGCTTCAGAGACGGATCGGAAAAGCCAGCCCTCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGGACCGAGGGCGCCGGCTCC
AGCTACAAGGAGATCACGGTTCCGTGCATTCCCATCAAAAGCGGGCCAGGGCAGCATGACAGGCAGCCTTTTATG
GCGAGGACTCTGTATGCTCCGCAGGACTGGACAGACGAGCCCAGACACGATGGCGCCCAGCCCAGCCTGCGATAC
CTCAATCTCCTCCGCGACGGCGCACGCGAGCACGGGCTTCCGGAGAGCTATCAGAGATATCTGGGGTCGTTGGAA
GCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTACTA
GTCCTGATCAAGGTCATGGGCTTAATGGCGGACGAGACCGGTAGGGTACCAGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATTTCATGTGGAGGAGCTACGAAATCGTCTTTAAGCCCCTATTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGAGGATGGAGGAGAGCTTGAGTCGTACAAGCTACCGAGCTTCCAGTCGGTCTGA
Gene >Ophcf2|03604
ATGTCTTCAACCACTCAGTTGATATGCCCGGCTCCGGCTCCGGCGGCCCTCGACGACCGCCTGGGACCGCTGCCA
GCGCCTTCGCTTCCTCGCACGTCGTGGAAACGACTCTCGCAGGCGTCCAACCCGGATCCCAGTCGAGGCGGCCCG
ACGACGGTGCTCTACCTTGCATACGGATCCAACATGGCGGCTGCGACCTTTCTGGGGATGCGAGGCATCAAGCCC
ATTTCCCAAGTCAACGTCTCGGTCCCTAGCCTTCGCCTCACCTTTGGCCTGCGCGGCGTGCCTTATTGGGAGCCT
TGCTTCGCCAACGTCGGCTTCAGAGACGGATCGGAAAAGCCAGCCCTCGACGACTGGGACGGCCGATGGGACGGT
CGCTTGATGGGCGTCGTGTACGAAGTGACGCCCAGCGACTTCGGCGTCATCATGCGGACCGAGGGCGCCGGCTCC
AGCTACAAGGAGATCACGGTTCCGTGCATTCCCATCAAAAGCGGGCCAGGGCAGCATGACAGGCAGCCTTTTATG
GCGAGGACTCTGTATGCTCCGCAGGACTGGACAGACGAGCCCAGACACGATGGCGCCCAGCCCAGCCTGCGATAC
CTCAATCTCCTCCGCGACGGCGCACGCGAGCACGGGCTTCCGGAGAGCTATCAGAGATATCTGGGGTCGTTGGAA
GCCTACACCATCACGCACTGGCGACAACGGGTGGGACGCTTCTTGCTGCTTCTCTTGTGGTCGCCCATGCTACTA
GTCCTGATCAAGGTCATGGGCTTAATGGCGGACGAGACCGGTAGGGTACCAGCGGGAATGGCAACGGCCATGAGC
ACGTGGTTCAATTTCATGTGGAGGAGCTACGAAATCGTCTTTAAGCCCCTATTTGGCGATGGCGAGAGGTCGGAA
GCCGAGGAGGATGGAGGAGAGCTTGAGTCGTACAAGCTACCGAGCTTCCAGTCGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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