Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03595
Gene name
Locationscaffold_03:3221378..3222378
Strand-
Gene length (bp)1000
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04982 HPP HPP family 6.4E-39 82 206

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Transmembrane domain 0.0725 0.2364 0.0394 0.4317 0.1231 0.1173 0.688 0.3249 0.5559 0.0178

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 108 127 19
3 134 156 22
4 176 198 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup473
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5769
Ophiocordyceps australis map64 (Brazil) OphauB2|786
Ophiocordyceps camponoti-floridani Ophcf2|03595 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|1393
Ophiocordyceps kimflemingae Ophio5|3348
Ophiocordyceps kimflemingae Ophio5|4189
Ophiocordyceps subramaniannii Hirsu2|1040
Ophiocordyceps subramaniannii Hirsu2|4581

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03595
MGRRSWNWDLDRLINPLLPPPPWSRLPGWLSHFVGYRRTKTEPTGNVVVTFWAFVGVLASLLVISAVTTRVPLFE
ANGVPVIVGSFGAAAVLEFCTIESPLAQPRNAILGQIISAVAAIIVAKLFQLSNHFDQVRWVGGALACASATALM
NLSGTVHPPAGATALLAVVDPRIVRLGWLLLPVIMLGCGLMLVLALLVDNIDRRFPLYWWTAQSLSCAKQNENQA
ECRCGSSSSSSSSGSSSNGGVDDDEETTIGSPPVIAHYDAILPDSRPEIVVGRGRILVPKHVILSVEEERLLHFM
SQRL*
Coding >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGGTGCCGCAGCCGTCCTCGAATTCTGCACCATTGAATCTCCT
CTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGCCAAACTCTTC
CAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCACGGCGCTCATG
AATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCGTATCGTTCGT
CTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCTTGTCGATAAT
ATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGAGAACCAGGCA
GAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGATGATGATGAG
GAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACCCGAAATTGTC
GTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTTGCACTTTATG
AGTCAAAGGTTGTGA
Transcript >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGGTGCCGCAGCCGTCCTCGAATTCTGCACCATTGAATCTCCT
CTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGCCAAACTCTTC
CAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCACGGCGCTCATG
AATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCGTATCGTTCGT
CTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCTTGTCGATAAT
ATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGAGAACCAGGCA
GAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGATGATGATGAG
GAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACCCGAAATTGTC
GTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTTGCACTTTATG
AGTCAAAGGTTGTGA
Gene >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGTGAGTTTCCCCTTCTTATACCCCCCCCCCCTGAGATGGGAA
TCATCAACGCTGCAAAAGCAGCCGAATAACAAAAGAACGTCAGGGTGCCGCAGCCGTCCTCGAATTCTGCACCAT
TGAATCTCCTCTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGC
CAAACTCTTCCAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCAC
GGCGCTCATGAATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCG
TATCGTTCGTCTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCT
TGTCGATAATATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGA
GAACCAGGCAGAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGA
TGATGATGAGGAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACC
CGAAATTGTCGTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTT
GCACTTTATGAGTCAAAGGTTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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