Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03595
Gene name
Locationscaffold_03:3221378..3222378
Strand-
Gene length (bp)1000
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04982 HPP HPP family 6.4E-39 82 206

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 108 127 19
3 134 156 22
4 176 198 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03595
MGRRSWNWDLDRLINPLLPPPPWSRLPGWLSHFVGYRRTKTEPTGNVVVTFWAFVGVLASLLVISAVTTRVPLFE
ANGVPVIVGSFGAAAVLEFCTIESPLAQPRNAILGQIISAVAAIIVAKLFQLSNHFDQVRWVGGALACASATALM
NLSGTVHPPAGATALLAVVDPRIVRLGWLLLPVIMLGCGLMLVLALLVDNIDRRFPLYWWTAQSLSCAKQNENQA
ECRCGSSSSSSSSGSSSNGGVDDDEETTIGSPPVIAHYDAILPDSRPEIVVGRGRILVPKHVILSVEEERLLHFM
SQRL*
Coding >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGGTGCCGCAGCCGTCCTCGAATTCTGCACCATTGAATCTCCT
CTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGCCAAACTCTTC
CAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCACGGCGCTCATG
AATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCGTATCGTTCGT
CTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCTTGTCGATAAT
ATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGAGAACCAGGCA
GAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGATGATGATGAG
GAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACCCGAAATTGTC
GTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTTGCACTTTATG
AGTCAAAGGTTGTGA
Transcript >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGGTGCCGCAGCCGTCCTCGAATTCTGCACCATTGAATCTCCT
CTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGCCAAACTCTTC
CAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCACGGCGCTCATG
AATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCGTATCGTTCGT
CTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCTTGTCGATAAT
ATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGAGAACCAGGCA
GAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGATGATGATGAG
GAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACCCGAAATTGTC
GTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTTGCACTTTATG
AGTCAAAGGTTGTGA
Gene >Ophcf2|03595
ATGGGCCGCCGCTCCTGGAATTGGGACCTGGACCGGCTCATCAACCCGCTTCTACCCCCTCCGCCTTGGTCCCGG
CTTCCCGGATGGCTGTCGCACTTTGTGGGATACCGCCGGACGAAGACGGAGCCGACGGGCAACGTCGTGGTCACG
TTTTGGGCCTTTGTCGGCGTATTGGCTTCTCTGCTCGTCATCTCGGCTGTTACGACTCGTGTACCGCTGTTTGAA
GCCAATGGAGTGCCCGTCATCGTCGGCTCCTTTGTGAGTTTCCCCTTCTTATACCCCCCCCCCCTGAGATGGGAA
TCATCAACGCTGCAAAAGCAGCCGAATAACAAAAGAACGTCAGGGTGCCGCAGCCGTCCTCGAATTCTGCACCAT
TGAATCTCCTCTCGCTCAGCCGCGCAACGCCATCCTCGGCCAGATCATCAGCGCAGTAGCTGCCATCATCGTCGC
CAAACTCTTCCAACTGAGCAATCACTTCGATCAAGTCCGCTGGGTAGGAGGTGCCCTGGCCTGCGCCTCTGCCAC
GGCGCTCATGAATCTCAGCGGCACCGTTCATCCGCCCGCCGGTGCGACGGCGCTGCTGGCCGTCGTTGATCCGCG
TATCGTTCGTCTTGGCTGGTTGCTGCTGCCTGTTATTATGCTCGGCTGTGGACTGATGCTTGTTCTGGCTTTGCT
TGTCGATAATATCGATCGCCGCTTTCCGTTGTATTGGTGGACGGCTCAATCGTTGAGCTGTGCTAAGCAGAATGA
GAACCAGGCAGAGTGCCGCTGCGGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAACGGCGGCGTCGA
TGATGATGAGGAGACGACCATTGGTAGTCCGCCCGTCATCGCCCATTACGACGCCATTCTGCCCGACTCACGACC
CGAAATTGTCGTCGGCCGGGGTCGTATCTTGGTGCCCAAGCATGTCATTCTGTCGGTTGAGGAGGAGCGGCTCTT
GCACTTTATGAGTCAAAGGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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