© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03591 |
| Gene name | |
| Location | scaffold_03:3211481..3214139 |
| Strand | - |
| Gene length (bp) | 2658 |
| Transcript length (bp) | 2658 |
| Coding sequence length (bp) | 2658 |
| Protein length (aa) | 886 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06738 | ThrE | Putative threonine/serine exporter | 3.7E-71 | 394 | 636 |
| PF12821 | ThrE_2 | Threonine/Serine exporter, ThrE | 7.5E-07 | 660 | 728 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 526 | 543 | 17 |
| 2 | 550 | 572 | 22 |
| 3 | 582 | 604 | 22 |
| 4 | 617 | 639 | 22 |
| 5 | 654 | 676 | 22 |
| 6 | 790 | 812 | 22 |
| 7 | 854 | 876 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 68.62 | 37.98 | 99.26 |
| Alive | In ants, during behavior modification | 26.90 | 14.82 | 38.98 |
| Dead | In ants, recently dead | 34.11 | 19.49 | 48.72 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.157279 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03591 MAGGPTSSSRQASDVPTPSRKPKKRVGWHSSSNSGGGGVDSAGNDESASRSPLVSPGRPLLANPPGAPDARELVL ALTKVLSDEREHENQEQQQWHQVPLISEPAPVVTTPPRAPRPALRRNTSYDGPEEREKADQAEQQATQRQLRSLT DARQRADRLAISVVRDSAPGSRRTSNDLDATFQPLMGDADNVEPINVAAATPDSRLEAPPPLTPHPRRRNIASDD HALAQTLVKSHTLRDKARDLFHRRPPAQEPHQDYVSRPPRYRGGILSSLLKLYNDDRGPGGGSNNSSGYTTPTLL ATPLMSPRASPPPSRPASTAGGPRVRSGMGLFGTSTASLSELIKSSSMLAAPVTSDIHDQWTDKIRREKPQRSSR KARARITVHIAGIISRHRYLLKLCRALMMYGAPTHRLEEYLTMSARVLEIEGQFLYIPSCMLVSFDDSTTHTTEV KVVRVPQGIDLGKLRDVHNIYKDVVHDKLGVEEATRRLDEVMQRKPKFHTWLRVPVYGVASACVAPFAFEGRFID LPIAFILGCIVGLLQLVFAPSNELYAHVFEVSAAVITSFLARGFGSLQQGNLFCFSALAQSSIALILPGYMVLCS SLELQSHNIVAGSVRMVHAMIYTLFLGYGITIGASLYGMMDKNATSDTHCHNPLPRPWYFVFVPGFTLCLCILNQ AKWRQTPTMTFMALAGFCVNSYCSIYFEQNTQISNMLGALTIGILANLYSRLGRHIHNYWLDMVEWWEYRMRPRF GLRRRRQADFADNWSIPSLSDPESRPASPEKPQFRQPRKVGYSLAAAAMLPAIFVQVPSGLAAGGSLLAGVTSAN ALNGNPEVLANASRMGGIDSTAFNVLFSVIQVAIGISVGLFMSALIVYPLGKRRSGLFSF* |
| Coding | >Ophcf2|03591 ATGGCGGGAGGGCCAACCAGCAGCAGCAGACAGGCTAGCGACGTGCCGACGCCCAGTCGCAAACCAAAGAAGCGT GTGGGCTGGCACTCGAGCAGCAATAGCGGCGGCGGAGGGGTCGACAGCGCAGGGAATGACGAGAGCGCCTCCAGA TCGCCGCTCGTCTCTCCGGGGCGTCCGCTGCTGGCCAACCCCCCCGGCGCCCCGGACGCGCGCGAACTGGTCCTG GCCCTCACAAAGGTGCTCTCGGACGAACGAGAGCACGAAAATCAGGAGCAGCAGCAGTGGCATCAGGTCCCCCTC ATCTCGGAGCCGGCCCCCGTCGTCACCACCCCTCCCAGGGCCCCGAGGCCGGCCCTGAGACGCAACACCAGCTAC GATGGGCCGGAGGAACGCGAAAAGGCGGACCAGGCAGAGCAGCAAGCCACCCAGCGCCAGCTCCGCTCCCTGACT GACGCACGCCAGCGTGCAGATCGGCTGGCCATATCCGTGGTCCGGGACTCTGCCCCGGGCTCCAGACGGACCTCG AATGACTTGGACGCTACATTCCAGCCCTTGATGGGTGACGCAGATAATGTCGAGCCCATCAACGTCGCTGCTGCC ACTCCCGACTCGAGGCTGGAGGCGCCGCCTCCTCTTACCCCCCACCCTCGTCGACGTAATATCGCTTCCGACGAC CACGCCCTCGCCCAAACTCTCGTCAAGTCTCACACGCTGAGGGACAAGGCCCGCGACTTATTCCACCGCAGGCCG CCCGCCCAGGAGCCTCATCAAGACTACGTCTCCCGCCCGCCACGATACCGCGGCGGCATCCTGTCTTCCCTGCTC AAGCTCTACAACGATGATAGAGGCCCTGGCGGCGGCAGTAACAACAGCAGCGGCTACACGACGCCCACATTGCTC GCAACGCCCCTCATGTCGCCCCGTGCGTCCCCGCCGCCGTCGCGCCCGGCCTCGACGGCGGGAGGCCCCCGAGTC CGCAGCGGTATGGGCTTGTTCGGCACCTCGACGGCGTCGCTGTCGGAGCTCATCAAGTCGTCATCGATGCTGGCC GCCCCCGTCACGAGTGATATCCACGACCAATGGACGGATAAGATCCGCCGCGAGAAGCCTCAGCGGTCGAGTCGA AAGGCGAGGGCCCGCATCACCGTTCACATCGCCGGCATCATCTCCCGTCACCGATACCTGCTCAAGCTGTGTCGT GCCCTCATGATGTACGGCGCCCCGACACACCGGCTAGAGGAATACCTCACCATGTCGGCTCGCGTGCTCGAGATC GAGGGCCAGTTCCTCTACATCCCCTCTTGCATGCTCGTCAGCTTCGACGACAGCACCACACACACGACCGAGGTC AAGGTGGTTCGCGTGCCCCAGGGCATCGATCTGGGCAAGCTCCGTGACGTCCACAACATCTACAAAGACGTCGTC CACGACAAGCTGGGCGTCGAGGAGGCGACTCGGCGTCTCGACGAGGTGATGCAGCGGAAGCCCAAGTTTCACACC TGGCTCCGCGTGCCCGTCTATGGCGTGGCCTCGGCCTGCGTCGCGCCCTTTGCCTTTGAGGGCCGCTTCATAGAC TTGCCCATCGCCTTTATCCTCGGCTGCATCGTCGGCCTGTTACAGCTCGTCTTTGCACCGAGCAACGAGCTGTAC GCACACGTTTTCGAAGTCTCGGCCGCCGTCATCACCTCCTTCCTCGCCCGTGGCTTCGGCTCCCTGCAACAGGGC AACCTCTTCTGCTTCAGCGCCCTGGCCCAGAGCAGCATCGCCCTCATCCTGCCTGGCTACATGGTTCTGTGTAGC TCGCTCGAGCTGCAGAGCCACAACATCGTGGCCGGCAGCGTACGGATGGTGCACGCCATGATCTACACACTCTTC CTCGGATACGGCATCACCATCGGCGCATCGCTCTACGGCATGATGGACAAGAACGCGACGAGCGACACGCACTGC CACAACCCCCTGCCGCGGCCCTGGTACTTCGTCTTCGTCCCGGGCTTCACCTTGTGTCTGTGCATCCTCAACCAG GCCAAGTGGCGGCAGACGCCAACCATGACGTTTATGGCCCTCGCCGGATTCTGCGTCAACTCGTACTGCAGCATC TACTTTGAGCAGAACACGCAAATCTCCAACATGCTGGGCGCCCTGACCATCGGCATCCTGGCTAATCTTTACTCG AGACTGGGGCGTCACATTCACAACTACTGGCTGGACATGGTCGAATGGTGGGAGTACCGGATGCGGCCCCGGTTC GGCCTGCGACGCCGCCGACAGGCCGACTTTGCCGACAACTGGTCCATCCCGTCACTGTCTGATCCCGAGTCCCGG CCGGCGTCTCCGGAGAAGCCGCAGTTCCGCCAGCCTCGCAAGGTCGGATACAGTCTGGCGGCCGCCGCCATGCTG CCAGCCATATTCGTCCAAGTGCCCTCGGGGCTGGCCGCCGGTGGCTCGCTGCTGGCGGGTGTCACGTCGGCCAAT GCGCTCAACGGCAATCCCGAGGTGCTGGCCAACGCGTCGAGGATGGGCGGCATAGACAGCACCGCCTTTAATGTT CTCTTCAGCGTCATCCAGGTCGCCATCGGCATCAGCGTCGGCCTGTTCATGAGCGCCCTGATTGTGTATCCGCTG GGCAAGAGGAGGAGCGGTCTGTTCAGTTTCTAG |
| Transcript | >Ophcf2|03591 ATGGCGGGAGGGCCAACCAGCAGCAGCAGACAGGCTAGCGACGTGCCGACGCCCAGTCGCAAACCAAAGAAGCGT GTGGGCTGGCACTCGAGCAGCAATAGCGGCGGCGGAGGGGTCGACAGCGCAGGGAATGACGAGAGCGCCTCCAGA TCGCCGCTCGTCTCTCCGGGGCGTCCGCTGCTGGCCAACCCCCCCGGCGCCCCGGACGCGCGCGAACTGGTCCTG GCCCTCACAAAGGTGCTCTCGGACGAACGAGAGCACGAAAATCAGGAGCAGCAGCAGTGGCATCAGGTCCCCCTC ATCTCGGAGCCGGCCCCCGTCGTCACCACCCCTCCCAGGGCCCCGAGGCCGGCCCTGAGACGCAACACCAGCTAC GATGGGCCGGAGGAACGCGAAAAGGCGGACCAGGCAGAGCAGCAAGCCACCCAGCGCCAGCTCCGCTCCCTGACT GACGCACGCCAGCGTGCAGATCGGCTGGCCATATCCGTGGTCCGGGACTCTGCCCCGGGCTCCAGACGGACCTCG AATGACTTGGACGCTACATTCCAGCCCTTGATGGGTGACGCAGATAATGTCGAGCCCATCAACGTCGCTGCTGCC ACTCCCGACTCGAGGCTGGAGGCGCCGCCTCCTCTTACCCCCCACCCTCGTCGACGTAATATCGCTTCCGACGAC CACGCCCTCGCCCAAACTCTCGTCAAGTCTCACACGCTGAGGGACAAGGCCCGCGACTTATTCCACCGCAGGCCG CCCGCCCAGGAGCCTCATCAAGACTACGTCTCCCGCCCGCCACGATACCGCGGCGGCATCCTGTCTTCCCTGCTC AAGCTCTACAACGATGATAGAGGCCCTGGCGGCGGCAGTAACAACAGCAGCGGCTACACGACGCCCACATTGCTC GCAACGCCCCTCATGTCGCCCCGTGCGTCCCCGCCGCCGTCGCGCCCGGCCTCGACGGCGGGAGGCCCCCGAGTC CGCAGCGGTATGGGCTTGTTCGGCACCTCGACGGCGTCGCTGTCGGAGCTCATCAAGTCGTCATCGATGCTGGCC GCCCCCGTCACGAGTGATATCCACGACCAATGGACGGATAAGATCCGCCGCGAGAAGCCTCAGCGGTCGAGTCGA AAGGCGAGGGCCCGCATCACCGTTCACATCGCCGGCATCATCTCCCGTCACCGATACCTGCTCAAGCTGTGTCGT GCCCTCATGATGTACGGCGCCCCGACACACCGGCTAGAGGAATACCTCACCATGTCGGCTCGCGTGCTCGAGATC GAGGGCCAGTTCCTCTACATCCCCTCTTGCATGCTCGTCAGCTTCGACGACAGCACCACACACACGACCGAGGTC AAGGTGGTTCGCGTGCCCCAGGGCATCGATCTGGGCAAGCTCCGTGACGTCCACAACATCTACAAAGACGTCGTC CACGACAAGCTGGGCGTCGAGGAGGCGACTCGGCGTCTCGACGAGGTGATGCAGCGGAAGCCCAAGTTTCACACC TGGCTCCGCGTGCCCGTCTATGGCGTGGCCTCGGCCTGCGTCGCGCCCTTTGCCTTTGAGGGCCGCTTCATAGAC TTGCCCATCGCCTTTATCCTCGGCTGCATCGTCGGCCTGTTACAGCTCGTCTTTGCACCGAGCAACGAGCTGTAC GCACACGTTTTCGAAGTCTCGGCCGCCGTCATCACCTCCTTCCTCGCCCGTGGCTTCGGCTCCCTGCAACAGGGC AACCTCTTCTGCTTCAGCGCCCTGGCCCAGAGCAGCATCGCCCTCATCCTGCCTGGCTACATGGTTCTGTGTAGC TCGCTCGAGCTGCAGAGCCACAACATCGTGGCCGGCAGCGTACGGATGGTGCACGCCATGATCTACACACTCTTC CTCGGATACGGCATCACCATCGGCGCATCGCTCTACGGCATGATGGACAAGAACGCGACGAGCGACACGCACTGC CACAACCCCCTGCCGCGGCCCTGGTACTTCGTCTTCGTCCCGGGCTTCACCTTGTGTCTGTGCATCCTCAACCAG GCCAAGTGGCGGCAGACGCCAACCATGACGTTTATGGCCCTCGCCGGATTCTGCGTCAACTCGTACTGCAGCATC TACTTTGAGCAGAACACGCAAATCTCCAACATGCTGGGCGCCCTGACCATCGGCATCCTGGCTAATCTTTACTCG AGACTGGGGCGTCACATTCACAACTACTGGCTGGACATGGTCGAATGGTGGGAGTACCGGATGCGGCCCCGGTTC GGCCTGCGACGCCGCCGACAGGCCGACTTTGCCGACAACTGGTCCATCCCGTCACTGTCTGATCCCGAGTCCCGG CCGGCGTCTCCGGAGAAGCCGCAGTTCCGCCAGCCTCGCAAGGTCGGATACAGTCTGGCGGCCGCCGCCATGCTG CCAGCCATATTCGTCCAAGTGCCCTCGGGGCTGGCCGCCGGTGGCTCGCTGCTGGCGGGTGTCACGTCGGCCAAT GCGCTCAACGGCAATCCCGAGGTGCTGGCCAACGCGTCGAGGATGGGCGGCATAGACAGCACCGCCTTTAATGTT CTCTTCAGCGTCATCCAGGTCGCCATCGGCATCAGCGTCGGCCTGTTCATGAGCGCCCTGATTGTGTATCCGCTG GGCAAGAGGAGGAGCGGTCTGTTCAGTTTCTAG |
| Gene | >Ophcf2|03591 ATGGCGGGAGGGCCAACCAGCAGCAGCAGACAGGCTAGCGACGTGCCGACGCCCAGTCGCAAACCAAAGAAGCGT GTGGGCTGGCACTCGAGCAGCAATAGCGGCGGCGGAGGGGTCGACAGCGCAGGGAATGACGAGAGCGCCTCCAGA TCGCCGCTCGTCTCTCCGGGGCGTCCGCTGCTGGCCAACCCCCCCGGCGCCCCGGACGCGCGCGAACTGGTCCTG GCCCTCACAAAGGTGCTCTCGGACGAACGAGAGCACGAAAATCAGGAGCAGCAGCAGTGGCATCAGGTCCCCCTC ATCTCGGAGCCGGCCCCCGTCGTCACCACCCCTCCCAGGGCCCCGAGGCCGGCCCTGAGACGCAACACCAGCTAC GATGGGCCGGAGGAACGCGAAAAGGCGGACCAGGCAGAGCAGCAAGCCACCCAGCGCCAGCTCCGCTCCCTGACT GACGCACGCCAGCGTGCAGATCGGCTGGCCATATCCGTGGTCCGGGACTCTGCCCCGGGCTCCAGACGGACCTCG AATGACTTGGACGCTACATTCCAGCCCTTGATGGGTGACGCAGATAATGTCGAGCCCATCAACGTCGCTGCTGCC ACTCCCGACTCGAGGCTGGAGGCGCCGCCTCCTCTTACCCCCCACCCTCGTCGACGTAATATCGCTTCCGACGAC CACGCCCTCGCCCAAACTCTCGTCAAGTCTCACACGCTGAGGGACAAGGCCCGCGACTTATTCCACCGCAGGCCG CCCGCCCAGGAGCCTCATCAAGACTACGTCTCCCGCCCGCCACGATACCGCGGCGGCATCCTGTCTTCCCTGCTC AAGCTCTACAACGATGATAGAGGCCCTGGCGGCGGCAGTAACAACAGCAGCGGCTACACGACGCCCACATTGCTC GCAACGCCCCTCATGTCGCCCCGTGCGTCCCCGCCGCCGTCGCGCCCGGCCTCGACGGCGGGAGGCCCCCGAGTC CGCAGCGGTATGGGCTTGTTCGGCACCTCGACGGCGTCGCTGTCGGAGCTCATCAAGTCGTCATCGATGCTGGCC GCCCCCGTCACGAGTGATATCCACGACCAATGGACGGATAAGATCCGCCGCGAGAAGCCTCAGCGGTCGAGTCGA AAGGCGAGGGCCCGCATCACCGTTCACATCGCCGGCATCATCTCCCGTCACCGATACCTGCTCAAGCTGTGTCGT GCCCTCATGATGTACGGCGCCCCGACACACCGGCTAGAGGAATACCTCACCATGTCGGCTCGCGTGCTCGAGATC GAGGGCCAGTTCCTCTACATCCCCTCTTGCATGCTCGTCAGCTTCGACGACAGCACCACACACACGACCGAGGTC AAGGTGGTTCGCGTGCCCCAGGGCATCGATCTGGGCAAGCTCCGTGACGTCCACAACATCTACAAAGACGTCGTC CACGACAAGCTGGGCGTCGAGGAGGCGACTCGGCGTCTCGACGAGGTGATGCAGCGGAAGCCCAAGTTTCACACC TGGCTCCGCGTGCCCGTCTATGGCGTGGCCTCGGCCTGCGTCGCGCCCTTTGCCTTTGAGGGCCGCTTCATAGAC TTGCCCATCGCCTTTATCCTCGGCTGCATCGTCGGCCTGTTACAGCTCGTCTTTGCACCGAGCAACGAGCTGTAC GCACACGTTTTCGAAGTCTCGGCCGCCGTCATCACCTCCTTCCTCGCCCGTGGCTTCGGCTCCCTGCAACAGGGC AACCTCTTCTGCTTCAGCGCCCTGGCCCAGAGCAGCATCGCCCTCATCCTGCCTGGCTACATGGTTCTGTGTAGC TCGCTCGAGCTGCAGAGCCACAACATCGTGGCCGGCAGCGTACGGATGGTGCACGCCATGATCTACACACTCTTC CTCGGATACGGCATCACCATCGGCGCATCGCTCTACGGCATGATGGACAAGAACGCGACGAGCGACACGCACTGC CACAACCCCCTGCCGCGGCCCTGGTACTTCGTCTTCGTCCCGGGCTTCACCTTGTGTCTGTGCATCCTCAACCAG GCCAAGTGGCGGCAGACGCCAACCATGACGTTTATGGCCCTCGCCGGATTCTGCGTCAACTCGTACTGCAGCATC TACTTTGAGCAGAACACGCAAATCTCCAACATGCTGGGCGCCCTGACCATCGGCATCCTGGCTAATCTTTACTCG AGACTGGGGCGTCACATTCACAACTACTGGCTGGACATGGTCGAATGGTGGGAGTACCGGATGCGGCCCCGGTTC GGCCTGCGACGCCGCCGACAGGCCGACTTTGCCGACAACTGGTCCATCCCGTCACTGTCTGATCCCGAGTCCCGG CCGGCGTCTCCGGAGAAGCCGCAGTTCCGCCAGCCTCGCAAGGTCGGATACAGTCTGGCGGCCGCCGCCATGCTG CCAGCCATATTCGTCCAAGTGCCCTCGGGGCTGGCCGCCGGTGGCTCGCTGCTGGCGGGTGTCACGTCGGCCAAT GCGCTCAACGGCAATCCCGAGGTGCTGGCCAACGCGTCGAGGATGGGCGGCATAGACAGCACCGCCTTTAATGTT CTCTTCAGCGTCATCCAGGTCGCCATCGGCATCAGCGTCGGCCTGTTCATGAGCGCCCTGATTGTGTATCCGCTG GGCAAGAGGAGGAGCGGTCTGTTCAGTTTCTAG |