© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03563 |
| Gene name | |
| Location | scaffold_03:3087555..3089298 |
| Strand | + |
| Gene length (bp) | 1743 |
| Transcript length (bp) | 1569 |
| Coding sequence length (bp) | 1569 |
| Protein length (aa) | 523 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00067 | p450 | Cytochrome P450 | 1.4E-53 | 101 | 471 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Yes |
| GO:0020037 | heme binding | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0004497 | monooxygenase activity | Yes |
| GO:0043169 | cation binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0046906 | tetrapyrrole binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.093 | 0.0984 | 0.1445 | 0.0664 | 0.1047 | 0.0408 | 0.866 | 0.2458 | 0.3763 | 0.0093 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 14 | Decorating |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 16.27 | 7.70 | 24.85 |
| Alive | In ants, during behavior modification | 7.76 | 2.84 | 12.67 |
| Dead | In ants, recently dead | 13.32 | 5.59 | 21.04 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.003275 | yes |
| Alive | Dead | 0.014786 | yes |
| Dead | Fungus | 0.437639 | no |
| Orthofinder run ID | 4 |
| Orthogroup | 7351 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|03563 (this protein) |
| Ophiocordyceps camponoti-rufipedis | Ophun1|4100 |
| Ophiocordyceps kimflemingae | Ophio5|4524 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03563 MWLAVVLKYAFVGLVLPWSIAFVVYRLAFHPLRKYPGPFWAKFTDSHSGLHAIGKRPHLDTYVNLRRYGVYRPAP NRLVFNSLTAVRDIYHNPNVTKARAYRHSRWLDRPNLFDTPDKDEHRRKRRVIGQVVSDRSLRVFEPIMSAQIDI FLSRLQVAARDGEVVNVTELCRRLAVDVVGHLAFGYPLRTQTETTNRFIPEAMGKAIYMTNLYYTWPALGIVQPL LRWLARKKVFTFQQAVRKMILARMAEPREAKPDFYGLASGELNAMGDQLDDSELWNEALFFVTAGGTTVSTAMCG LFFNLSQHPDIYARVAAEVRSAFSSGREIHNGPRLAGCRYLRAVIDESLRLSPPSLSPLWREPDASSTEPWVVDG HVIPPGTEAAVHLYSILHHPEYFPDPFAFKPERWLEEDEGGAAGTEAQEARATARRAQVSFGMGERSCAGKAMAY METSVTMARTLWYFDFHRAPGEAGTLGAGMAGEKEPWAGPTQYQLQDILVADHDGPNMVFTPRGEFWRERES* |
| Coding | >Ophcf2|03563 ATGTGGCTCGCCGTTGTTCTCAAGTATGCCTTTGTCGGCCTCGTCCTACCATGGAGCATTGCCTTTGTCGTTTAC CGGCTCGCCTTTCACCCGCTACGGAAGTACCCAGGGCCCTTTTGGGCAAAATTCACCGATAGTCACAGCGGCCTT CATGCCATCGGCAAGCGACCTCATCTCGATACCTACGTCAACCTCCGACGCTATGGCGTGTATAGACCGGCCCCG AACCGGCTCGTTTTCAACTCTCTGACGGCCGTGAGAGACATCTATCACAACCCCAATGTCACAAAGGCTCGTGCC TATCGCCACTCTCGCTGGCTGGATAGACCCAACTTGTTCGACACGCCGGACAAGGATGAGCATCGGCGCAAGCGA AGGGTCATCGGCCAGGTCGTCTCGGACCGGTCACTGCGAGTGTTTGAGCCCATAATGAGCGCTCAGATTGACATC TTCCTCAGCCGCCTCCAGGTGGCGGCGCGTGACGGCGAGGTCGTCAACGTTACGGAACTGTGCCGCCGTCTCGCC GTCGATGTCGTCGGCCACTTGGCTTTCGGGTACCCGCTGCGGACTCAGACGGAGACGACTAACCGGTTCATCCCC GAAGCCATGGGCAAGGCCATCTACATGACCAACCTGTACTATACCTGGCCCGCACTCGGCATCGTTCAGCCGCTA CTACGCTGGCTGGCTCGTAAAAAGGTCTTTACCTTTCAGCAGGCCGTGCGCAAGATGATCCTCGCCCGCATGGCT GAACCGCGTGAGGCAAAGCCAGACTTCTACGGCCTCGCGTCAGGCGAGCTCAACGCAATGGGTGATCAGCTCGAC GACAGCGAGCTCTGGAATGAGGCTCTCTTCTTCGTCACCGCCGGCGGCACCACCGTCTCGACGGCCATGTGTGGC CTATTCTTCAACCTGTCACAACATCCAGACATATACGCCCGCGTCGCCGCCGAGGTCCGCTCCGCCTTTTCCTCC GGTCGCGAGATCCACAACGGCCCAAGGCTGGCGGGATGCCGCTATCTGCGCGCCGTAATTGACGAGTCGCTACGC CTATCGCCACCATCACTCAGCCCGCTGTGGCGCGAGCCGGACGCATCGTCGACAGAGCCGTGGGTGGTCGACGGC CATGTCATCCCTCCGGGAACCGAGGCCGCCGTCCACCTTTACAGCATCCTGCACCATCCAGAATACTTCCCTGAC CCGTTCGCCTTTAAGCCCGAGCGCTGGCTCGAAGAAGACGAGGGCGGCGCTGCAGGCACCGAGGCACAAGAGGCT CGGGCGACGGCGCGACGTGCTCAGGTCTCCTTCGGCATGGGCGAGCGAAGCTGCGCGGGAAAAGCCATGGCGTAC ATGGAGACGAGCGTCACCATGGCCAGGACCTTGTGGTACTTCGATTTCCATAGGGCCCCTGGCGAGGCTGGCACG CTGGGAGCTGGGATGGCAGGCGAAAAGGAGCCTTGGGCTGGGCCGACTCAGTATCAGCTGCAAGATATTCTGGTG GCGGATCACGATGGGCCGAATATGGTGTTTACGCCCCGGGGGGAGTTTTGGCGCGAAAGGGAGAGCTGA |
| Transcript | >Ophcf2|03563 ATGTGGCTCGCCGTTGTTCTCAAGTATGCCTTTGTCGGCCTCGTCCTACCATGGAGCATTGCCTTTGTCGTTTAC CGGCTCGCCTTTCACCCGCTACGGAAGTACCCAGGGCCCTTTTGGGCAAAATTCACCGATAGTCACAGCGGCCTT CATGCCATCGGCAAGCGACCTCATCTCGATACCTACGTCAACCTCCGACGCTATGGCGTGTATAGACCGGCCCCG AACCGGCTCGTTTTCAACTCTCTGACGGCCGTGAGAGACATCTATCACAACCCCAATGTCACAAAGGCTCGTGCC TATCGCCACTCTCGCTGGCTGGATAGACCCAACTTGTTCGACACGCCGGACAAGGATGAGCATCGGCGCAAGCGA AGGGTCATCGGCCAGGTCGTCTCGGACCGGTCACTGCGAGTGTTTGAGCCCATAATGAGCGCTCAGATTGACATC TTCCTCAGCCGCCTCCAGGTGGCGGCGCGTGACGGCGAGGTCGTCAACGTTACGGAACTGTGCCGCCGTCTCGCC GTCGATGTCGTCGGCCACTTGGCTTTCGGGTACCCGCTGCGGACTCAGACGGAGACGACTAACCGGTTCATCCCC GAAGCCATGGGCAAGGCCATCTACATGACCAACCTGTACTATACCTGGCCCGCACTCGGCATCGTTCAGCCGCTA CTACGCTGGCTGGCTCGTAAAAAGGTCTTTACCTTTCAGCAGGCCGTGCGCAAGATGATCCTCGCCCGCATGGCT GAACCGCGTGAGGCAAAGCCAGACTTCTACGGCCTCGCGTCAGGCGAGCTCAACGCAATGGGTGATCAGCTCGAC GACAGCGAGCTCTGGAATGAGGCTCTCTTCTTCGTCACCGCCGGCGGCACCACCGTCTCGACGGCCATGTGTGGC CTATTCTTCAACCTGTCACAACATCCAGACATATACGCCCGCGTCGCCGCCGAGGTCCGCTCCGCCTTTTCCTCC GGTCGCGAGATCCACAACGGCCCAAGGCTGGCGGGATGCCGCTATCTGCGCGCCGTAATTGACGAGTCGCTACGC CTATCGCCACCATCACTCAGCCCGCTGTGGCGCGAGCCGGACGCATCGTCGACAGAGCCGTGGGTGGTCGACGGC CATGTCATCCCTCCGGGAACCGAGGCCGCCGTCCACCTTTACAGCATCCTGCACCATCCAGAATACTTCCCTGAC CCGTTCGCCTTTAAGCCCGAGCGCTGGCTCGAAGAAGACGAGGGCGGCGCTGCAGGCACCGAGGCACAAGAGGCT CGGGCGACGGCGCGACGTGCTCAGGTCTCCTTCGGCATGGGCGAGCGAAGCTGCGCGGGAAAAGCCATGGCGTAC ATGGAGACGAGCGTCACCATGGCCAGGACCTTGTGGTACTTCGATTTCCATAGGGCCCCTGGCGAGGCTGGCACG CTGGGAGCTGGGATGGCAGGCGAAAAGGAGCCTTGGGCTGGGCCGACTCAGTATCAGCTGCAAGATATTCTGGTG GCGGATCACGATGGGCCGAATATGGTGTTTACGCCCCGGGGGGAGTTTTGGCGCGAAAGGGAGAGCTGA |
| Gene | >Ophcf2|03563 ATGTGGCTCGCCGTTGTTCTCAAGTATGCCTTTGTCGGCCTCGTCCTACCATGGGTATGTGTGACTCTCGTCTAC GGCTGCCCTGAAGCCACTGACGACCTTTTGCCCCTTCGGAAGAGCATTGCCTTTGTCGTTTACCGGCTCGCCTTT CACCCGCTACGGAAGTACCCAGGGCCCTTTTGGGCAAAATTCACCGATAGTCACAGCGGCCTTCATGCCATCGGC AAGCGACCTCATCTCGATACCTACGTCAACCTCCGACGCTATGGTTCGCGAGTTGCCTTTGGGGAATTGAAGAGG CCGCAAGCTGACGTGACGTGACAGGCGTGTATAGACCGGCCCCGAACCGGCTCGTTTTCAACTCTCTGACGGCCG TGAGAGGTCAGGCCCTTCTTTGACTGGTCCGTCTGTTACGTTTTGCGCTCACGCTGGTCAGACATCTATCACAAC CCCAATGTCACAAAGGCTCGTGCCTATCGCCACTCTCGCTGGCTGGATAGACCCAACTTGTTCGACACGCCGGAC AAGGATGAGCATCGGCGCAAGCGAAGGGTCATCGGCCAGGTCGTCTCGGACCGGTCACTGCGAGTGTTTGAGCCC ATAATGAGCGCTCAGATTGACATCTTCCTCAGCCGCCTCCAGGTGGCGGCGCGTGACGGCGAGGTCGTCAACGTT ACGGAACTGTGCCGCCGTCTCGCCGTCGATGTCGTCGGCCACTTGGCTTTCGGGTACCCGCTGCGGACTCAGACG GAGACGACTAACCGGTTCATCCCCGAAGCCATGGGCAAGGCCATCTACATGACCAACCTGTACTATACCTGGCCC GCACTCGGCATCGTTCAGCCGCTACTACGCTGGCTGGCTCGTAAAAAGGTCTTTACCTTTCAGCAGGCCGTGCGC AAGATGATCCTCGCCCGCATGGCTGAACCGCGTGAGGCAAAGCCAGACTTCTACGGCCTCGCGTCAGGCGAGCTC AACGCAATGGGTGATCAGCTCGACGACAGCGAGCTCTGGAATGAGGCTCTCTTCTTCGTCACCGCCGGCGGCACC ACCGTCTCGACGGCCATGTGTGGCCTATTCTTCAACCTGTCACAACATCCAGACATATACGCCCGCGTCGCCGCC GAGGTCCGCTCCGCCTTTTCCTCCGGTCGCGAGATCCACAACGGCCCAAGGCTGGCGGGATGCCGCTATCTGCGC GCCGTAATTGACGAGTCGCTACGCCTATCGCCACCATCACTCAGCCCGCTGTGGCGCGAGCCGGACGCATCGTCG ACAGAGCCGTGGGTGGTCGACGGCCATGTCATCCCTCCGGGAACCGAGGCCGCCGTCCACCTTTACAGCATCCTG CACCATCCAGAATACTTCCCTGACCCGTTCGCCTTTAAGCCCGAGCGCTGGCTCGAAGAAGACGAGGGCGGCGCT GCAGGCACCGAGGCACAAGAGGCTCGGGCGACGGCGCGACGTGCTCAGGTCTCCTTCGGCATGGGCGAGCGAAGC TGCGCGGGAAAAGCCATGGCGTACATGGAGACGAGCGTCACCATGGCCAGGACCTTGTGGTACTTCGATTTCCAT AGGGCCCCTGGCGAGGCTGGCACGCTGGGAGCTGGGATGGCAGGCGAAAAGGAGCCTTGGGCTGGGCCGACTCAG TATCAGCTGCAAGATATTCTGGTGGCGGATCACGATGGGCCGAATATGGTGTTTACGCCCCGGGGGGAGTTTTGG CGCGAAAGGGAGAGCTGA |