Protein ID | Ophcf2|03562 |
Gene name | |
Location | scaffold_03:3085423..3086828 |
Strand | + |
Gene length (bp) | 1405 |
Transcript length (bp) | 1200 |
Coding sequence length (bp) | 1200 |
Protein length (aa) | 400 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 39 | 61 | 22 |
2 | 74 | 96 | 22 |
3 | 116 | 138 | 22 |
4 | 159 | 181 | 22 |
5 | 201 | 223 | 22 |
6 | 235 | 257 | 22 |
7 | 272 | 291 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03562 MENFLSLPPARQQAILNGPGLAPPPGVTPNFTHPPNRTTMGITIISICLVLGTLTGLVRLYSRFCTKKLHAEDVL GFAAYVSFVASGWSLLAFGHYGGFFVHQWNVQAKTMITISYVLYFFPIFYCMTMLFAKTAILLEWTRIFVPVIRN SFYWISRLTTLINVCLYLSVIVATSLYCVPVEKVWHKWVPGHCLNRKAVDTCVAVFNLAIDLLILALPQRIIWSL RIDTSKKIGVSIVFSVGLLACACAIARTYLVIQLDFTGDVTYKLCETFMFAYSEMTCVLMVFFVPASARAFKQNS LLSRLVSSLRSWTRLPSSKKSRSAEDVGGQFPPTIGSKPINRLFNSTDEETQALSLGEMRPAERFIVKTMEFEQR EDAASKASTEPEVPSRNHHPWVKP* |
Coding | >Ophcf2|03562 ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG |
Transcript | >Ophcf2|03562 ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG |
Gene | >Ophcf2|03562 ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGGTATG TAACCAATCTCGACGGAGACTGCTCCGTGCTCATAGACGAACTACTCAGTCCTCGGCTTCGCGGCATACGTACGA ATACATTACCACCAACGTGCTTTTTTCCCCATCTCACCATGACAGGTTTCCTTCGTCGCCTCTGGCTGGAGCCTG CTCGCTTTTGGACACTATGGAGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCT TACGTCGGTCTCGCACGCCTCCCACAAGAACGCCGGCTGACGTTGACCAGGTCTTGTACTTTTTTCCCATCTTTT ACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCA ACTCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGT CGTTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGG ACACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCC TGAGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTGTGAGTCGTCCTGCCCG AGTATCAAGGCTGGAAGCTGATTATTGGCCTGCTAGAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTGGTCAT TCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTG CGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGCCTGCTGTCGAGATTGGTGTC TTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAGGACGTCGGAGGCCAATTCCC GCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTAAGTCTGGG CGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCAGCTTCCAAGGC ATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG |