Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03562
Gene name
Locationscaffold_03:3085423..3086828
Strand+
Gene length (bp)1405
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 74 96 22
3 116 138 22
4 159 181 22
5 201 223 22
6 235 257 22
7 272 291 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03562
MENFLSLPPARQQAILNGPGLAPPPGVTPNFTHPPNRTTMGITIISICLVLGTLTGLVRLYSRFCTKKLHAEDVL
GFAAYVSFVASGWSLLAFGHYGGFFVHQWNVQAKTMITISYVLYFFPIFYCMTMLFAKTAILLEWTRIFVPVIRN
SFYWISRLTTLINVCLYLSVIVATSLYCVPVEKVWHKWVPGHCLNRKAVDTCVAVFNLAIDLLILALPQRIIWSL
RIDTSKKIGVSIVFSVGLLACACAIARTYLVIQLDFTGDVTYKLCETFMFAYSEMTCVLMVFFVPASARAFKQNS
LLSRLVSSLRSWTRLPSSKKSRSAEDVGGQFPPTIGSKPINRLFNSTDEETQALSLGEMRPAERFIVKTMEFEQR
EDAASKASTEPEVPSRNHHPWVKP*
Coding >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC
GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT
GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC
TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC
TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG
TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC
ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG
AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC
GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT
GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC
CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG
GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG
ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC
GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG
Transcript >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC
GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT
GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC
TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC
TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG
TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC
ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG
AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC
GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT
GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC
CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG
GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG
ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC
GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG
Gene >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGGTATG
TAACCAATCTCGACGGAGACTGCTCCGTGCTCATAGACGAACTACTCAGTCCTCGGCTTCGCGGCATACGTACGA
ATACATTACCACCAACGTGCTTTTTTCCCCATCTCACCATGACAGGTTTCCTTCGTCGCCTCTGGCTGGAGCCTG
CTCGCTTTTGGACACTATGGAGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCT
TACGTCGGTCTCGCACGCCTCCCACAAGAACGCCGGCTGACGTTGACCAGGTCTTGTACTTTTTTCCCATCTTTT
ACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCA
ACTCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGT
CGTTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGG
ACACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCC
TGAGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTGTGAGTCGTCCTGCCCG
AGTATCAAGGCTGGAAGCTGATTATTGGCCTGCTAGAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTGGTCAT
TCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTG
CGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGCCTGCTGTCGAGATTGGTGTC
TTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAGGACGTCGGAGGCCAATTCCC
GCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTAAGTCTGGG
CGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCAGCTTCCAAGGC
ATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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