Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03562
Gene name
Locationscaffold_03:3085423..3086828
Strand+
Gene length (bp)1405
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Transmembrane domain 0.0975 0.0727 0.0394 0.8732 0.0622 0.0071 0.118 0.3191 0.3628 0.0308

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 74 96 22
3 116 138 22
4 159 181 22
5 201 223 22
6 235 257 22
7 272 291 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 14 (None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup441
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|336
Ophiocordyceps australis map64 (Brazil) OphauB2|1247
Ophiocordyceps australis map64 (Brazil) OphauB2|693
Ophiocordyceps camponoti-floridani Ophcf2|03562 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|06623
Ophiocordyceps camponoti-rufipedis Ophun1|4099
Ophiocordyceps kimflemingae Ophio5|4523
Ophiocordyceps kimflemingae Ophio5|8606
Ophiocordyceps subramaniannii Hirsu2|6282

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03562
MENFLSLPPARQQAILNGPGLAPPPGVTPNFTHPPNRTTMGITIISICLVLGTLTGLVRLYSRFCTKKLHAEDVL
GFAAYVSFVASGWSLLAFGHYGGFFVHQWNVQAKTMITISYVLYFFPIFYCMTMLFAKTAILLEWTRIFVPVIRN
SFYWISRLTTLINVCLYLSVIVATSLYCVPVEKVWHKWVPGHCLNRKAVDTCVAVFNLAIDLLILALPQRIIWSL
RIDTSKKIGVSIVFSVGLLACACAIARTYLVIQLDFTGDVTYKLCETFMFAYSEMTCVLMVFFVPASARAFKQNS
LLSRLVSSLRSWTRLPSSKKSRSAEDVGGQFPPTIGSKPINRLFNSTDEETQALSLGEMRPAERFIVKTMEFEQR
EDAASKASTEPEVPSRNHHPWVKP*
Coding >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC
GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT
GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC
TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC
TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG
TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC
ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG
AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC
GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT
GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC
CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG
GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG
ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC
GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG
Transcript >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGTCCTC
GGCTTCGCGGCATACGTTTCCTTCGTCGCCTCTGGCTGGAGCCTGCTCGCTTTTGGACACTATGGAGGCTTCTTT
GTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCTTACGTCTTGTACTTTTTTCCCATCTTTTAC
TGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCAAC
TCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGTCG
TTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGGAC
ACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCCTG
AGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTAGCTTGTGCCTGTGCCATC
GCTCGGACGTATCTGGTCATTCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTT
GCCTATTCGGAGATGACGTGCGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGC
CTGCTGTCGAGATTGGTGTCTTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAG
GACGTCGGAGGCCAATTCCCGCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAG
ACGCAGGCGCTAAGTCTGGGCGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGC
GAGGACGCAGCTTCCAAGGCATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG
Gene >Ophcf2|03562
ATGGAGAACTTCCTCAGCCTCCCGCCTGCCCGGCAGCAGGCCATTCTCAACGGCCCCGGACTGGCGCCGCCACCG
GGTGTCACGCCCAACTTCACACACCCGCCCAACAGGACGACGATGGGCATTACCATCATCTCCATCTGCCTCGTC
CTTGGCACGCTGACGGGGCTTGTCCGCTTGTACTCGCGTTTCTGCACCAAAAAGTTGCATGCTGAGGATGGTATG
TAACCAATCTCGACGGAGACTGCTCCGTGCTCATAGACGAACTACTCAGTCCTCGGCTTCGCGGCATACGTACGA
ATACATTACCACCAACGTGCTTTTTTCCCCATCTCACCATGACAGGTTTCCTTCGTCGCCTCTGGCTGGAGCCTG
CTCGCTTTTGGACACTATGGAGGCTTCTTTGTGCACCAGTGGAATGTCCAAGCCAAGACCATGATCACCATTTCT
TACGTCGGTCTCGCACGCCTCCCACAAGAACGCCGGCTGACGTTGACCAGGTCTTGTACTTTTTTCCCATCTTTT
ACTGCATGACGATGCTCTTCGCCAAGACAGCCATCTTGCTCGAGTGGACGCGTATCTTTGTGCCCGTCATCCGCA
ACTCGTTTTACTGGATCAGTCGTCTGACAACACTCATCAACGTCTGCTTATACCTTTCAGTCATCGTCGCCACGT
CGTTGTATTGTGTGCCGGTAGAAAAGGTCTGGCACAAGTGGGTTCCGGGCCATTGCCTAAACCGCAAGGCTGTGG
ACACATGCGTTGCCGTCTTCAACCTGGCCATTGATCTTCTCATCTTGGCTCTGCCGCAGCGAATCATCTGGTCCC
TGAGAATTGACACGTCCAAAAAGATTGGCGTCTCAATCGTCTTTTCCGTTGGGTTGCTGTGAGTCGTCCTGCCCG
AGTATCAAGGCTGGAAGCTGATTATTGGCCTGCTAGAGCTTGTGCCTGTGCCATCGCTCGGACGTATCTGGTCAT
TCAGCTGGACTTTACTGGTGACGTGACCTACAAGCTCTGCGAGACATTCATGTTTGCCTATTCGGAGATGACGTG
CGTTCTTATGGTCTTTTTCGTGCCGGCGTCGGCGCGCGCTTTCAAGCAGAACAGCCTGCTGTCGAGATTGGTGTC
TTCACTGCGTTCCTGGACACGGCTGCCATCATCCAAGAAGAGCCGGTCGGCCGAGGACGTCGGAGGCCAATTCCC
GCCTACCATTGGCAGCAAACCCATCAACCGCCTGTTCAACTCGACAGATGAGGAGACGCAGGCGCTAAGTCTGGG
CGAGATGAGGCCGGCGGAGCGATTCATTGTCAAGACTATGGAGTTTGAGCAGCGCGAGGACGCAGCTTCCAAGGC
ATCCACGGAGCCGGAGGTGCCCAGCCGCAATCATCACCCTTGGGTGAAGCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail