© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03561 |
| Gene name | |
| Location | scaffold_03:3082606..3084636 |
| Strand | - |
| Gene length (bp) | 2030 |
| Transcript length (bp) | 1668 |
| Coding sequence length (bp) | 1668 |
| Protein length (aa) | 556 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.7E-32 | 55 | 269 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 4.7E-12 | 68 | 457 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.2E-11 | 84 | 218 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 115 | 137 | 22 |
| 4 | 142 | 164 | 22 |
| 5 | 177 | 199 | 22 |
| 6 | 204 | 226 | 22 |
| 7 | 247 | 266 | 19 |
| 8 | 276 | 298 | 22 |
| 9 | 324 | 346 | 22 |
| 10 | 361 | 378 | 17 |
| 11 | 391 | 413 | 22 |
| 12 | 423 | 445 | 22 |
| 13 | 466 | 483 | 17 |
| 14 | 528 | 547 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03561 MPAPTVPHDVVELSNRSSKDADPPLIERRRISGDGEDTIVYIHGFRFWLLTIAISVMLFLASLDTTITTTSLVAI THDLGGFQTASWILSGYQLGWVAVIVICAKLSDIFGRKPVFVVCITLFAVFSAGCAAAQTMAQLIVLRAFQGVGG GGCLALTTILITEAVPPERLGAFASKINVALILSLVLGPVLGGAITSGTTWRWIFIINIPMSIMALALAHIGIPS GFPHHDQSKSAQDPGASKVRKLARLDVVGSVLLIMAALSFTSGFQEADSRFAWNSAYVITLLVVSLLLWLVLLAW ERHITLFSRVREPVIPWRFFTNRVRAGVMLVFVLVGVPIVVTNFQLPQRFQLVNGLSSIDASVRILPFGAAFCVG SLASSRLTSSLRVPSIYHVLAGSAMQVVGFALLGVLRASPNIQPAVYGYQVLCGIGVGLNYMALYLLIPFTADRR DRAIGMGLAGQFRTMGSAFGLAIVTSVFNGYTGPRLARLGLSAEVTSVEGLGTQRLSTITPEILADVRNILSEAY NRQMLVLCAFAAAQMPAALLLWKRKQLVAA* |
| Coding | >Ophcf2|03561 ATGCCGGCTCCTACAGTCCCCCACGATGTTGTCGAGCTCAGCAACCGTAGCTCGAAAGATGCTGATCCGCCTCTC ATCGAGCGGCGCCGAATCAGCGGCGATGGTGAAGATACCATCGTCTATATCCATGGCTTTCGCTTCTGGCTCTTA ACAATTGCCATCTCTGTCATGCTGTTCTTGGCCTCCCTTGACACAACCATCACAACTACATCCCTCGTTGCCATC ACTCATGATCTGGGTGGTTTTCAGACCGCCAGTTGGATTCTCTCTGGCTACCAGCTGGGCTGGGTAGCTGTCATT GTAATCTGCGCGAAGCTGAGCGATATCTTCGGACGCAAGCCAGTCTTCGTCGTCTGCATCACCCTTTTTGCCGTC TTCTCTGCCGGCTGCGCAGCCGCTCAGACCATGGCTCAACTAATCGTTCTTCGTGCTTTTCAGGGTGTTGGTGGC GGCGGCTGTCTGGCCCTGACGACCATCCTCATTACTGAGGCTGTGCCTCCGGAGAGGCTCGGCGCCTTTGCCTCC AAGATCAACGTCGCCCTCATCTTGTCTCTCGTTCTGGGACCTGTTCTCGGCGGCGCCATTACCTCTGGTACAACG TGGCGTTGGATCTTCATCATCAACATTCCCATGAGTATCATGGCCCTCGCGCTCGCCCACATCGGCATTCCGAGT GGCTTTCCTCATCATGATCAGTCCAAGTCCGCCCAGGACCCGGGTGCGTCCAAGGTGAGGAAGCTAGCACGGTTG GACGTCGTGGGCTCGGTGCTTCTGATCATGGCCGCGCTTTCTTTCACATCTGGCTTTCAGGAGGCCGATTCGCGG TTTGCGTGGAACTCGGCCTACGTCATCACCCTTCTCGTCGTCTCCCTCCTCCTCTGGCTTGTTCTGCTGGCCTGG GAGCGCCACATCACCTTGTTTAGCCGAGTTCGCGAACCCGTCATACCCTGGCGTTTCTTCACCAACCGCGTCAGG GCCGGCGTCATGCTTGTCTTCGTTCTCGTGGGCGTGCCTATTGTCGTCACAAACTTCCAGCTGCCGCAGAGGTTT CAGCTTGTCAATGGTCTCTCGAGCATCGACGCGAGCGTCCGAATTCTGCCTTTCGGCGCGGCCTTTTGCGTTGGT TCCCTAGCCAGCTCGCGGCTCACCAGCAGTTTGAGGGTGCCCAGCATCTACCACGTGCTCGCCGGATCTGCCATG CAGGTCGTCGGCTTTGCGCTTCTCGGCGTCTTGCGGGCTTCGCCAAATATCCAACCAGCAGTGTATGGTTACCAG GTGCTTTGCGGCATCGGTGTTGGTCTCAACTACATGGCTCTGTATCTCCTGATCCCTTTTACCGCGGACCGAAGA GACAGAGCCATTGGCATGGGCCTTGCCGGACAGTTCCGCACCATGGGGAGTGCCTTTGGACTGGCCATTGTCACG TCCGTCTTTAACGGCTACACAGGTCCTCGATTAGCAAGGCTGGGCCTATCGGCTGAAGTCACCAGCGTCGAAGGT TTGGGGACGCAGCGTCTGTCGACGATCACGCCCGAGATTTTAGCCGACGTGCGAAACATTCTGTCAGAGGCGTAC AATCGGCAGATGCTGGTGCTGTGTGCTTTTGCAGCCGCCCAGATGCCAGCTGCACTGCTCCTGTGGAAGCGGAAA CAACTTGTGGCAGCATAG |
| Transcript | >Ophcf2|03561 ATGCCGGCTCCTACAGTCCCCCACGATGTTGTCGAGCTCAGCAACCGTAGCTCGAAAGATGCTGATCCGCCTCTC ATCGAGCGGCGCCGAATCAGCGGCGATGGTGAAGATACCATCGTCTATATCCATGGCTTTCGCTTCTGGCTCTTA ACAATTGCCATCTCTGTCATGCTGTTCTTGGCCTCCCTTGACACAACCATCACAACTACATCCCTCGTTGCCATC ACTCATGATCTGGGTGGTTTTCAGACCGCCAGTTGGATTCTCTCTGGCTACCAGCTGGGCTGGGTAGCTGTCATT GTAATCTGCGCGAAGCTGAGCGATATCTTCGGACGCAAGCCAGTCTTCGTCGTCTGCATCACCCTTTTTGCCGTC TTCTCTGCCGGCTGCGCAGCCGCTCAGACCATGGCTCAACTAATCGTTCTTCGTGCTTTTCAGGGTGTTGGTGGC GGCGGCTGTCTGGCCCTGACGACCATCCTCATTACTGAGGCTGTGCCTCCGGAGAGGCTCGGCGCCTTTGCCTCC AAGATCAACGTCGCCCTCATCTTGTCTCTCGTTCTGGGACCTGTTCTCGGCGGCGCCATTACCTCTGGTACAACG TGGCGTTGGATCTTCATCATCAACATTCCCATGAGTATCATGGCCCTCGCGCTCGCCCACATCGGCATTCCGAGT GGCTTTCCTCATCATGATCAGTCCAAGTCCGCCCAGGACCCGGGTGCGTCCAAGGTGAGGAAGCTAGCACGGTTG GACGTCGTGGGCTCGGTGCTTCTGATCATGGCCGCGCTTTCTTTCACATCTGGCTTTCAGGAGGCCGATTCGCGG TTTGCGTGGAACTCGGCCTACGTCATCACCCTTCTCGTCGTCTCCCTCCTCCTCTGGCTTGTTCTGCTGGCCTGG GAGCGCCACATCACCTTGTTTAGCCGAGTTCGCGAACCCGTCATACCCTGGCGTTTCTTCACCAACCGCGTCAGG GCCGGCGTCATGCTTGTCTTCGTTCTCGTGGGCGTGCCTATTGTCGTCACAAACTTCCAGCTGCCGCAGAGGTTT CAGCTTGTCAATGGTCTCTCGAGCATCGACGCGAGCGTCCGAATTCTGCCTTTCGGCGCGGCCTTTTGCGTTGGT TCCCTAGCCAGCTCGCGGCTCACCAGCAGTTTGAGGGTGCCCAGCATCTACCACGTGCTCGCCGGATCTGCCATG CAGGTCGTCGGCTTTGCGCTTCTCGGCGTCTTGCGGGCTTCGCCAAATATCCAACCAGCAGTGTATGGTTACCAG GTGCTTTGCGGCATCGGTGTTGGTCTCAACTACATGGCTCTGTATCTCCTGATCCCTTTTACCGCGGACCGAAGA GACAGAGCCATTGGCATGGGCCTTGCCGGACAGTTCCGCACCATGGGGAGTGCCTTTGGACTGGCCATTGTCACG TCCGTCTTTAACGGCTACACAGGTCCTCGATTAGCAAGGCTGGGCCTATCGGCTGAAGTCACCAGCGTCGAAGGT TTGGGGACGCAGCGTCTGTCGACGATCACGCCCGAGATTTTAGCCGACGTGCGAAACATTCTGTCAGAGGCGTAC AATCGGCAGATGCTGGTGCTGTGTGCTTTTGCAGCCGCCCAGATGCCAGCTGCACTGCTCCTGTGGAAGCGGAAA CAACTTGTGGCAGCATAG |
| Gene | >Ophcf2|03561 ATGCCGGCTCCTACAGTCCCCCACGATGTTGTCGAGCTCAGCAACCGTAGCTCGAAAGATGCTGATCCGCCTCTC ATCGAGCGGCGCCGAATCAGCGGCGATGGTGAAGATACCATCGTCTATATCCATGGCTTTCGCTTCTGGCTCTTA ACAATTGCGTTCGTCTCGTCCGACTCTCTATCCGCTTAAGATGAGCTTCTCACCTGTCAACACTGCGCAGCATCT CTGTCATGCTGTTCTTGGCCTCCCTTGACACAACCATCACAACTACATCCCTCGTTGCCATCACTCATGATCTGG GTGGTTTTCAGACCGCCAGTTGGATTCTCTCTGGCTACCAGCTGGGCTGGGTAGGTGAGTCCACCGATTTGTCAC GATGCTGCTGTCGGCCACCTCGCCCCCGATACTCATTGGTATGGTAGCTGTCATTGTAATCTGCGCGAAGCTGAG CGATATCTTCGGACGCAAGCCAGTCTTCGTCGTCTGCATCACCCTTTTTGCCGTCTTCTCTGCCGGCTGCGCAGC CGCTCAGACCATGGCTCAACTGTGAGTTTCTCACCTACGAGAACGACGCAGACTTTGTCTTAGCTGATGACCTAC CCTCGGAAGAATCGTTCTTCGTGCTTTTCAGGGTGTTGGTGGCGGCGGCTGTCTGGCCCTGACGACCATCCTCAT TACTGAGGCTGTGCCTCCGGAGAGGCTCGGCGCCTTTGCCTCCAAGATCAACGTCGCCCTCATCTTGTCTCTCGT TCTGGGACCTGTTCTCGGCGGCGCCATTACCTCTGGTACAACGTGGCGTTGGATCTTCATCATCAAGTAACTATC TCCGCCCGTCTCTAGTACATCGAATGAAGCTGATTAACGCCGGCCTGCTCAGCATTCCCATGAGTATCATGGCCC TCGCGCTCGCCCACATCGGCATTCCGAGTGGCTTTCCTCATCATGATCAGTCCAAGTCCGCCCAGGACCCGGGTG CGTCCAAGGTGAGGAAGCTAGCACGGTTGGACGTCGTGGGCTCGGTGCTTCTGATCATGGCCGCGCTTTCTTTCA CATCTGGCTTTCAGGAGGCCGATTCGCGGTTTGCGTGGAACTCGGCCTACGTCATCACCCTTCTCGTCGTCTCCC TCCTCCTCTGGCTTGTTCTGCTGGCCTGGGAGCGCCACATCACCTTGTTTAGCCGAGTTCGCGAACCCGTCATAC CCTGGCGTTTCTTCACCAACCGCGTCAGGGCCGGCGTCATGCTGTGAGCAACCTGAGATCCCCGCGAAGCTCAAG CGGCTGACATGGCACCTCAGTGTCTTCGTTCTCGTGGGCGTGCCTATTGTCGTCACAAACTTCCAGCTGCCGCAG AGGTTTCAGCTTGTCAATGGTCTCTCGAGCATCGACGCGAGCGTCCGAATTCTGCCTTTCGGCGCGGCCTTTTGC GTTGGTTCCCTAGCCAGCTCGCGGCTCACCAGCAGTTTGAGGGTGCCCAGCATCTACCACGTGCTCGCCGGATCT GCCATGCAGGTCGTCGGCTTTGCGCTTCTCGGCGTCTTGCGGGCTTCGCCAAATATCCAACCAGCAGTGTATGGT TACCAGGTGCTTTGCGGCATCGGTGTTGGTCTCAACTACATGGCTCTGTATCTCCTGATCCCTTTTACCGCGGAC CGAAGAGACAGAGGTGAGTTGCGGAGATGTGCTCAATCGCAAAGAACGATTATACTGACGAGAAGACAGCCATTG GCATGGGCCTTGCCGGACAGTTCCGCACCATGGGGAGTGCCTTTGGACTGGCCATTGTCACGTCCGTCTTTAACG GCTACACAGGTCCTCGATTAGCAAGGCTGGGCCTATCGGCTGAAGTCACCAGCGTCGAAGGTTTGGGGACGCAGC GTCTGTCGACGATCACGCCCGAGATTTTAGCCGACGTGCGAAACATTCTGTCAGAGGCGTACAATCGGCAGATGC TGGTGCTGTGTGCTTTTGCAGCCGCCCAGATGCCAGCTGCACTGCTCCTGTGGAAGCGGAAACAACTTGTGGCAG CATAG |