Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03560
Gene name
Locationscaffold_03:3081693..3082571
Strand+
Gene length (bp)878
Transcript length (bp)681
Coding sequence length (bp)681
Protein length (aa) 227

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03959 FSH1 Serine hydrolase (FSH1) 1.0E-24 2 204

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03560
MRFLCLHGRGTDADIFKSQTARLREALGPEHEYVFVNGNVRARARAGLAADTTYGPQGRGFWPLDDADEERTRRV
YHDMIAFIASRGPFDGLMAFSEGASVAATLLAELARPDSDEPIATFRCAVFFCGLPPLDLQLRKSGRAVRMLDPA
VDGVAVRLPTAHIWSGAGQVLPDAGRHLAALCDPDTREELIHDLGHQVPGSRSEQGLRQTVRVIERTLERAKSCS
S*
Coding >Ophcf2|03560
ATGCGATTCTTGTGCCTCCATGGCCGCGGCACCGACGCCGACATCTTCAAGAGCCAGACCGCCCGTCTTCGGGAG
GCCCTCGGCCCAGAGCACGAATACGTCTTTGTCAATGGCAATGTCCGAGCCAGAGCTCGTGCAGGCCTCGCCGCC
GACACCACCTACGGTCCCCAAGGCCGTGGCTTTTGGCCCCTAGATGATGCCGACGAAGAACGCACGCGTCGCGTT
TACCATGATATGATAGCCTTCATCGCCTCCCGTGGCCCCTTTGACGGCCTCATGGCCTTCTCTGAGGGCGCCAGC
GTCGCCGCCACCCTCCTGGCCGAGCTCGCCCGTCCCGACTCTGACGAGCCCATCGCTACCTTCCGCTGCGCCGTC
TTTTTCTGCGGCCTGCCTCCTCTCGACCTTCAGCTGCGCAAGTCTGGCCGCGCTGTCCGGATGCTCGACCCGGCA
GTGGATGGCGTCGCGGTACGGCTGCCCACGGCCCACATCTGGTCCGGCGCCGGTCAGGTCTTGCCCGACGCGGGA
AGACATTTGGCGGCTCTGTGTGACCCAGACACGCGAGAGGAGCTGATCCACGACCTGGGCCACCAAGTGCCGGGG
TCTCGGTCCGAGCAAGGCCTGCGCCAAACCGTCCGCGTCATCGAGCGTACGCTTGAGAGGGCCAAGTCTTGCTCA
TCCTGA
Transcript >Ophcf2|03560
ATGCGATTCTTGTGCCTCCATGGCCGCGGCACCGACGCCGACATCTTCAAGAGCCAGACCGCCCGTCTTCGGGAG
GCCCTCGGCCCAGAGCACGAATACGTCTTTGTCAATGGCAATGTCCGAGCCAGAGCTCGTGCAGGCCTCGCCGCC
GACACCACCTACGGTCCCCAAGGCCGTGGCTTTTGGCCCCTAGATGATGCCGACGAAGAACGCACGCGTCGCGTT
TACCATGATATGATAGCCTTCATCGCCTCCCGTGGCCCCTTTGACGGCCTCATGGCCTTCTCTGAGGGCGCCAGC
GTCGCCGCCACCCTCCTGGCCGAGCTCGCCCGTCCCGACTCTGACGAGCCCATCGCTACCTTCCGCTGCGCCGTC
TTTTTCTGCGGCCTGCCTCCTCTCGACCTTCAGCTGCGCAAGTCTGGCCGCGCTGTCCGGATGCTCGACCCGGCA
GTGGATGGCGTCGCGGTACGGCTGCCCACGGCCCACATCTGGTCCGGCGCCGGTCAGGTCTTGCCCGACGCGGGA
AGACATTTGGCGGCTCTGTGTGACCCAGACACGCGAGAGGAGCTGATCCACGACCTGGGCCACCAAGTGCCGGGG
TCTCGGTCCGAGCAAGGCCTGCGCCAAACCGTCCGCGTCATCGAGCGTACGCTTGAGAGGGCCAAGTCTTGCTCA
TCCTGA
Gene >Ophcf2|03560
ATGCGATTCTTGTGCCTCCATGGCCGCGGCACCGACGCCGACGTAAGTACATATCATGATCTCGTCTCGTCTCGC
CTGTTGCGACGCTGCTGATCATGGCCAGATCTTCAAGAGCCAGACCGGTCTGTCGGCTGGAGGACCCCCGCGTCT
GCCTCCCTCCGCTGACAGAGGCCAGCCCGTCTTCGGGAGGCCCTCGGCCCAGAGCACGAATACGTCTTTGTCAAT
GGCAATGTCCGAGCCAGAGCTCGTGCAGGTATGTCTGATTCTGATTCATCCCTCGTTAGGCCGTATCTGGGACCT
GACCCCGTGACGTTGCACCCACCGCCACGCCCCCAGGCCTCGCCGCCGACACCACCTACGGTCCCCAAGGCCGTG
GCTTTTGGCCCCTAGATGATGCCGACGAAGAACGCACGCGTCGCGTTTACCATGATATGATAGCCTTCATCGCCT
CCCGTGGCCCCTTTGACGGCCTCATGGCCTTCTCTGAGGGCGCCAGCGTCGCCGCCACCCTCCTGGCCGAGCTCG
CCCGTCCCGACTCTGACGAGCCCATCGCTACCTTCCGCTGCGCCGTCTTTTTCTGCGGCCTGCCTCCTCTCGACC
TTCAGCTGCGCAAGTCTGGCCGCGCTGTCCGGATGCTCGACCCGGCAGTGGATGGCGTCGCGGTACGGCTGCCCA
CGGCCCACATCTGGTCCGGCGCCGGTCAGGTCTTGCCCGACGCGGGAAGACATTTGGCGGCTCTGTGTGACCCAG
ACACGCGAGAGGAGCTGATCCACGACCTGGGCCACCAAGTGCCGGGGTCTCGGTCCGAGCAAGGCCTGCGCCAAA
CCGTCCGCGTCATCGAGCGTACGCTTGAGAGGGCCAAGTCTTGCTCATCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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