Protein ID | Ophcf2|03558 |
Gene name | |
Location | scaffold_03:3070205..3072843 |
Strand | + |
Gene length (bp) | 2638 |
Transcript length (bp) | 1524 |
Coding sequence length (bp) | 1524 |
Protein length (aa) | 508 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00135 | COesterase | Carboxylesterase family | 1.1E-67 | 14 | 427 |
PF20434 | BD-FAE | BD-FAE | 5.7E-08 | 96 | 193 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2523 | 0.1072 | 0.8322 | 0.0547 | 0.2587 | 0.1929 | 0.5192 | 0.1647 | 0.1918 | 0.339 |
Orthofinder run ID | 4 |
Orthogroup | 71 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03558 MGNGGGGSLTITLPDSRPVNQFLGIPYAAKPKRFAPARQPDAWTEPRNASVFGPSCMQYVADADAGASSQLVRDL FATHHQESEDCLFINAFAPAAKAPALRPVVVFIPGGGWQMSNGNLDFTGFAAYEDIVAFGFNYRTNVFGFPIADE IPLKNRNLGLMDQQLALAWVQTNAKAFGGDPEKVTIWGESAGAMSVDIHLHNYASGRAPFRAAVMSSGQMSFGLL AFTPPATYTQGWRRLAVAVGCPRGIIGRLSCMRRVPARDLVDNLDSATFSPYPLADGKVVPRARAAGWRRGSVAR VPLLMTTMAEEGRSLLRPNISLDLFRSAWLPESAVSKDQAENIFEDYRKMPGLRNDFDVTSAIYTDWIWQCPQQM LANASVALGNPVWRGYINKSLAEVLPEKYRYLGKFHGADMMLLFFVAARHERGFEMPSHLVRFARELRSAIGSFV RDPRRGPGWPAIGSPSAPRDVAVLGDKSTMIDRNVLDANCAIFTDALAAVEKKSVAW* |
Coding | >Ophcf2|03558 ATGGGCAATGGTGGTGGAGGGAGCCTCACCATCACGCTCCCCGACTCCCGCCCCGTCAACCAGTTCCTAGGCATC CCCTACGCCGCCAAGCCCAAACGATTCGCCCCAGCCAGACAGCCAGATGCATGGACGGAGCCGCGCAACGCCTCG GTCTTTGGGCCTTCGTGCATGCAGTACGTCGCCGACGCTGATGCCGGTGCCAGCTCGCAACTTGTGAGGGATCTC TTCGCCACTCATCATCAAGAGAGCGAGGATTGTCTCTTTATAAACGCCTTTGCTCCTGCTGCCAAGGCCCCTGCT CTTCGACCCGTCGTCGTCTTCATCCCCGGTGGAGGCTGGCAGATGAGCAACGGGAACCTCGACTTCACGGGCTTC GCCGCGTATGAAGACATTGTCGCCTTTGGCTTCAACTACCGCACCAACGTCTTCGGCTTCCCCATCGCCGACGAG ATCCCCCTCAAGAACCGCAACCTCGGATTGATGGACCAGCAACTCGCCCTCGCCTGGGTGCAAACCAATGCCAAA GCCTTCGGCGGTGATCCCGAAAAGGTCACCATCTGGGGCGAATCCGCCGGAGCCATGTCCGTCGATATCCACCTC CACAACTACGCCTCAGGGAGGGCCCCCTTTCGAGCCGCCGTCATGTCCAGCGGTCAGATGTCCTTTGGCCTCCTG GCCTTTACGCCTCCCGCCACCTATACTCAGGGCTGGCGTCGTCTCGCCGTTGCTGTTGGATGTCCGCGAGGTATC ATCGGTCGACTCTCGTGTATGCGTCGCGTGCCGGCTCGGGATCTGGTCGATAACCTCGACAGCGCCACCTTCTCC CCCTATCCGCTGGCCGATGGCAAGGTCGTGCCCCGTGCCCGAGCTGCCGGCTGGAGGCGTGGGAGCGTCGCTCGC GTCCCGCTGCTCATGACCACCATGGCCGAGGAGGGCCGCTCGCTGCTGAGGCCCAACATCAGCCTCGACCTCTTC CGCTCCGCTTGGTTGCCCGAGTCGGCGGTGTCCAAGGACCAGGCTGAAAACATATTCGAGGATTATCGCAAGATG CCCGGGCTCCGGAACGACTTTGACGTCACCTCTGCCATTTACACCGACTGGATATGGCAATGCCCCCAGCAGATG CTCGCCAACGCCTCCGTCGCCCTCGGAAACCCCGTCTGGCGCGGCTACATCAACAAGTCCCTCGCCGAGGTGCTG CCCGAAAAGTACCGTTATCTCGGCAAATTCCACGGAGCCGACATGATGCTGCTCTTCTTCGTCGCCGCCCGCCAC GAACGGGGCTTCGAGATGCCGTCTCACCTCGTCAGATTCGCCCGTGAACTCCGTTCCGCCATCGGCTCCTTCGTC CGTGATCCCCGCCGCGGCCCCGGCTGGCCCGCCATCGGATCTCCGTCGGCGCCCCGAGACGTCGCCGTCCTCGGA GACAAGAGTACCATGATCGATCGGAACGTGCTGGATGCAAACTGTGCCATCTTCACCGACGCCTTGGCCGCGGTG GAAAAGAAATCCGTCGCCTGGTAG |
Transcript | >Ophcf2|03558 ATGGGCAATGGTGGTGGAGGGAGCCTCACCATCACGCTCCCCGACTCCCGCCCCGTCAACCAGTTCCTAGGCATC CCCTACGCCGCCAAGCCCAAACGATTCGCCCCAGCCAGACAGCCAGATGCATGGACGGAGCCGCGCAACGCCTCG GTCTTTGGGCCTTCGTGCATGCAGTACGTCGCCGACGCTGATGCCGGTGCCAGCTCGCAACTTGTGAGGGATCTC TTCGCCACTCATCATCAAGAGAGCGAGGATTGTCTCTTTATAAACGCCTTTGCTCCTGCTGCCAAGGCCCCTGCT CTTCGACCCGTCGTCGTCTTCATCCCCGGTGGAGGCTGGCAGATGAGCAACGGGAACCTCGACTTCACGGGCTTC GCCGCGTATGAAGACATTGTCGCCTTTGGCTTCAACTACCGCACCAACGTCTTCGGCTTCCCCATCGCCGACGAG ATCCCCCTCAAGAACCGCAACCTCGGATTGATGGACCAGCAACTCGCCCTCGCCTGGGTGCAAACCAATGCCAAA GCCTTCGGCGGTGATCCCGAAAAGGTCACCATCTGGGGCGAATCCGCCGGAGCCATGTCCGTCGATATCCACCTC CACAACTACGCCTCAGGGAGGGCCCCCTTTCGAGCCGCCGTCATGTCCAGCGGTCAGATGTCCTTTGGCCTCCTG GCCTTTACGCCTCCCGCCACCTATACTCAGGGCTGGCGTCGTCTCGCCGTTGCTGTTGGATGTCCGCGAGGTATC ATCGGTCGACTCTCGTGTATGCGTCGCGTGCCGGCTCGGGATCTGGTCGATAACCTCGACAGCGCCACCTTCTCC CCCTATCCGCTGGCCGATGGCAAGGTCGTGCCCCGTGCCCGAGCTGCCGGCTGGAGGCGTGGGAGCGTCGCTCGC GTCCCGCTGCTCATGACCACCATGGCCGAGGAGGGCCGCTCGCTGCTGAGGCCCAACATCAGCCTCGACCTCTTC CGCTCCGCTTGGTTGCCCGAGTCGGCGGTGTCCAAGGACCAGGCTGAAAACATATTCGAGGATTATCGCAAGATG CCCGGGCTCCGGAACGACTTTGACGTCACCTCTGCCATTTACACCGACTGGATATGGCAATGCCCCCAGCAGATG CTCGCCAACGCCTCCGTCGCCCTCGGAAACCCCGTCTGGCGCGGCTACATCAACAAGTCCCTCGCCGAGGTGCTG CCCGAAAAGTACCGTTATCTCGGCAAATTCCACGGAGCCGACATGATGCTGCTCTTCTTCGTCGCCGCCCGCCAC GAACGGGGCTTCGAGATGCCGTCTCACCTCGTCAGATTCGCCCGTGAACTCCGTTCCGCCATCGGCTCCTTCGTC CGTGATCCCCGCCGCGGCCCCGGCTGGCCCGCCATCGGATCTCCGTCGGCGCCCCGAGACGTCGCCGTCCTCGGA GACAAGAGTACCATGATCGATCGGAACGTGCTGGATGCAAACTGTGCCATCTTCACCGACGCCTTGGCCGCGGTG GAAAAGAAATCCGTCGCCTGGTAG |
Gene | >Ophcf2|03558 ATGGGCAATGGTGGTGGAGGGAGTGGGAGGCGCCACTGCGTTCCGGGGCGGAGAGATTGTTGTGAGGCGTCGATG CGGTTGGTTGAGGGAGATGCGTAGGGGGGTGATGTAGAGGGGGGTGAGTGGGAGATTGAGTGGGAGATTGAGTGA GAGGGTGAGGAGGAGAGTGAGGAGGAGAGTCAGTAGAAGAGTGAGTGAAGAGTGAGTGAAGAGTGAGTGAAGAGT GAGTGAAGAGTGAGTGAAGAGTGAGTGAAGAGTGAGTGAAGAGTAAGTAAAGACTAAGTAAAGACTAAGTGAAGA GTCGGCAGAAGAGTAAATAGAAGAGTAGATAGAAGAGTAAATAGAAGAGTAAATAGAAGAATAAATAGAAGAGTG AGTAAAGAGTGAGTAAAGAGTAAATAGAGGAGTAAGTAAATAGCAAGTAACAGCAAGTTGACAGCAAGTAACCAG CAAGCAACCAGCAACAAAGCACCCAATCCACCCCAAACAACAACCAAGCCACCCCCAAACCAACAACACCAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAACCGCCCCCAAGCTTCCAAAAACACCCACTCTCGAAAGGTCAATCCCCCC TCCCGCGATACCTAGGCTTTACGACTAGAAGCACAGCTCGTTTCCGCGCGTGATGGAGATCCCTTCCCCCTATCA ACAAACACATATAAACGACATCTCACTCACCAAGCATCTATCTACCCCTACAACTCCTACCCATAACCTCGTCTT TTCCGAATAACTCATATCCCGGCATGCCTCTGTCATCCAACAACCAACCCCCATACCACCACCCCCATATCCCCC CCCCCCCCCCTAACCCTCCAACAACACCTCCATATATACCCATCAATCCATCCCATCCCATCCCATCCCCTTTCC TCCCCCATCACCCAACAATGAAGCCCCTCCTCCTCCTCCACCTCCTCCTCCTCCCCTATCCCTCTCCCTCCCCCT CGCCACAACCTCAAGCGGCCCTCTTCAAGGCCTCACCATCACGCTCCCCGACTCCCGCCCCGTCAACCAGTTCCT AGGCATCCCCTACGCCGCCAAGCCCAAACGATTCGCCCCAGCCAGACAGCCAGATGCATGGACGGAGCCGCGCAA CGCCTCGGTCTTTGGGCCTTCGTGCATGCAGTACGTCGCCGACGCTGATGCCGGTGCCAGCTCGCAACTTGTGAG GGATCTCTTCGCCACTCATCATCAAGAGAGCGAGGATTGTCTCTTTATAAACGCCTTTGCTCCTGCTGCCAAGGC CCCTGCTCTTCGACCCGTCGTCGTCTTCATCCCCGGTGGAGGCTGGCAGATGAGCAACGGGAACCTCGACTTCAC GGGCTTCGCCGCGTATGAAGACATTGTCGCCTTTGGCTTCAACTACCGCACCAACGGTGAGTTTTTTTTTTTTTT TCCTCCTAACCCTTACCCTCTTCTTCCCCTTGACGATATACAAGTCTTCGGCTTCCCCATCGCCGACGAGATCCC CCTCAAGAACCGCAACCTCGGATTGATGGACCAGCAACTCGCCCTCGCCTGGGTGCAAACCAATGCCAAAGCCTT CGGCGGTGATCCCGAAAAGGTCACCATCTGGGGCGAATCCGCCGGAGCCATGTCCGTCGATATCCACCTCCACAA CTACGCCTCAGGGAGGGCCCCCTTTCGAGCCGCCGTCATGTCCAGCGGTCAGATGTCCTTTGGCCTCCTGGCCTT TACGCCTCCCGCCACCTATACTCAGGGCTGGCGTCGTCTCGCCGTTGCTGTTGGATGTCCGCGAGGTATCATCGG TCGACTCTCGTGTATGCGTCGCGTGCCGGCTCGGGATCTGGTCGATAACCTCGACAGCGCCACCTTCTCCCCCTA TCCGCTGGCCGATGGCAAGGTCGTGCCCCGTGCCCGAGCTGCCGGCTGGAGGCGTGGGAGCGTCGCTCGCGTCCC GCTGCTCATGACCACCATGGCCGAGGAGGGCCGCTCGCTGCTGAGGCCCAACATCAGCCTCGACCTCTTCCGCTC CGCTTGGTTGCCCGAGTCGGCGGTGTCCAAGGACCAGGCTGAAAACATATTCGAGGATTATCGCAAGATGCCCGG GCTCCGGAACGACTTTGACGTCACCTCTGCCATTTACACCGACTGGATATGGCAATGCGTCAGTCGACCCCCTTT TACCTTTTTGGGCTTGAACCCCTGAATTGCCCCGGACTGACTCCCTCTCAAGCCCCAGCAGATGCTCGCCAACGC CTCCGTCGCCCTCGGAAACCCCGTCTGGCGCGGCTACATCAACAAGTCCCTCGCCGAGGTGCTGCCCGAAAAGTA CCGTTATCTCGGCAAATTCCACGGAGCCGACATGATGCTGCTCTTCTTCGTCGCCGCCCGCCACGAACGGGGCTT CGAGATGCCGTCTCACCTCGTCAGATTCGCCCGTGAACTCCGTTCCGCCATCGGCTCCTTCGTCCGTGATCCCCG CCGCGGCCCCGGCTGGCCCGCCATCGGATCTCCGTCGGCGCCCCGAGACGTCGCCGTCCTCGGAGACAAGAGTAC CATGATCGATCGGAACGTGCTGGATGCAAACTGTGCCATCTTCACCGACGCCTTGGCCGCGGTGGAAAAGAAATC CGTCGCCTGGTAG |