Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03540
Gene name
Locationscaffold_03:2996923..2998270
Strand+
Gene length (bp)1347
Transcript length (bp)1347
Coding sequence length (bp)1347
Protein length (aa) 449

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03540
MALRGRRYVLLAILITALIALVLLRREPFQRARDLLVNRYRPPPRHMPDPNWTPPPIKNPFPTLSGTGASPPQIP
IWNRPKKKLYKKYGLDYAPPLLIGFTRAWPVLLQAVVSYLTAGWPADQIWIVDNTGASRANAAGRLTLQNPLFLD
HGLLRRLGVRVLSTPVLMTFAQLQNYYTHLAHVHGWPWYFWSHMDVLVLSYEEGLQGVTPAAGETGYKTVYELCL
AELQLRRKESLRWSSVFFSYDHLTLVNREAYDDVGGWDVFIPYYMNDCDMHSRLMMRNWSQPEARAGIITDVSTV
LDDLRALYRDPDVEPAFTDPNPPKPDPDPSQDDDDDDNEQALNETRHQKRADPQSADPQSYFQRLKTVADSMFHY
KHGERGRNTWQLGQHGGQGEPFYYPARGLAEATDVLTEAGREVFRRKWGHKDCDLIDGGKRGFDDQWRVEKDW*
Coding >Ophcf2|03540
ATGGCCCTCCGTGGCCGCCGATACGTCCTGCTAGCCATCCTCATCACCGCCCTGATAGCCCTCGTCCTCCTTCGA
CGAGAACCCTTCCAACGAGCCCGCGACCTCTTGGTCAATAGATACCGTCCACCACCGCGCCACATGCCAGACCCG
AACTGGACTCCGCCGCCGATCAAGAACCCCTTTCCAACGCTGTCGGGAACAGGAGCCTCACCACCCCAGATCCCC
ATCTGGAACCGACCCAAGAAGAAACTATACAAGAAATATGGCCTCGATTACGCGCCGCCGCTCCTCATCGGCTTC
ACCCGCGCCTGGCCCGTCCTCCTCCAGGCCGTCGTCTCGTACCTGACGGCCGGCTGGCCTGCCGATCAAATCTGG
ATCGTCGACAACACGGGGGCTTCACGGGCCAATGCCGCGGGCCGACTGACGCTGCAGAATCCGCTGTTCCTGGAT
CACGGGCTGCTCCGACGGCTGGGCGTGCGTGTGCTTTCGACGCCCGTGCTCATGACGTTTGCCCAGCTGCAGAAC
TATTACACCCATCTGGCTCACGTCCACGGATGGCCTTGGTACTTCTGGTCCCATATGGATGTCTTGGTGCTTTCG
TATGAGGAAGGCCTTCAGGGCGTGACGCCGGCGGCTGGGGAGACGGGGTATAAGACTGTGTATGAGCTGTGTCTC
GCCGAGCTGCAGCTTCGTCGGAAGGAGAGTCTTCGCTGGTCCAGCGTCTTCTTCTCGTACGATCATCTGACGCTG
GTCAATCGCGAGGCGTATGATGACGTCGGCGGCTGGGATGTCTTTATCCCTTACTATATGAACGACTGCGATATG
CACTCTCGCCTGATGATGCGCAACTGGAGTCAGCCTGAAGCCCGAGCCGGCATCATAACCGACGTCAGCACCGTC
CTCGACGACCTCCGAGCTCTATACCGCGATCCAGACGTCGAACCAGCCTTCACAGATCCCAACCCCCCGAAACCA
GACCCCGACCCCTCGCAAGACGACGACGACGACGACAACGAACAAGCCCTCAACGAAACGCGACACCAAAAACGC
GCCGATCCCCAGTCCGCCGATCCCCAGTCCTACTTCCAGCGTCTCAAGACCGTCGCGGACTCCATGTTCCACTAC
AAGCACGGGGAACGCGGCCGCAACACCTGGCAGCTCGGTCAGCACGGCGGCCAGGGCGAGCCCTTTTACTACCCT
GCTCGAGGGCTGGCCGAGGCGACCGACGTGTTGACTGAGGCGGGGCGAGAGGTCTTTCGGCGGAAATGGGGGCAT
AAGGATTGCGATCTTATCGATGGGGGGAAGCGTGGCTTTGATGATCAGTGGCGGGTCGAGAAGGATTGGTAA
Transcript >Ophcf2|03540
ATGGCCCTCCGTGGCCGCCGATACGTCCTGCTAGCCATCCTCATCACCGCCCTGATAGCCCTCGTCCTCCTTCGA
CGAGAACCCTTCCAACGAGCCCGCGACCTCTTGGTCAATAGATACCGTCCACCACCGCGCCACATGCCAGACCCG
AACTGGACTCCGCCGCCGATCAAGAACCCCTTTCCAACGCTGTCGGGAACAGGAGCCTCACCACCCCAGATCCCC
ATCTGGAACCGACCCAAGAAGAAACTATACAAGAAATATGGCCTCGATTACGCGCCGCCGCTCCTCATCGGCTTC
ACCCGCGCCTGGCCCGTCCTCCTCCAGGCCGTCGTCTCGTACCTGACGGCCGGCTGGCCTGCCGATCAAATCTGG
ATCGTCGACAACACGGGGGCTTCACGGGCCAATGCCGCGGGCCGACTGACGCTGCAGAATCCGCTGTTCCTGGAT
CACGGGCTGCTCCGACGGCTGGGCGTGCGTGTGCTTTCGACGCCCGTGCTCATGACGTTTGCCCAGCTGCAGAAC
TATTACACCCATCTGGCTCACGTCCACGGATGGCCTTGGTACTTCTGGTCCCATATGGATGTCTTGGTGCTTTCG
TATGAGGAAGGCCTTCAGGGCGTGACGCCGGCGGCTGGGGAGACGGGGTATAAGACTGTGTATGAGCTGTGTCTC
GCCGAGCTGCAGCTTCGTCGGAAGGAGAGTCTTCGCTGGTCCAGCGTCTTCTTCTCGTACGATCATCTGACGCTG
GTCAATCGCGAGGCGTATGATGACGTCGGCGGCTGGGATGTCTTTATCCCTTACTATATGAACGACTGCGATATG
CACTCTCGCCTGATGATGCGCAACTGGAGTCAGCCTGAAGCCCGAGCCGGCATCATAACCGACGTCAGCACCGTC
CTCGACGACCTCCGAGCTCTATACCGCGATCCAGACGTCGAACCAGCCTTCACAGATCCCAACCCCCCGAAACCA
GACCCCGACCCCTCGCAAGACGACGACGACGACGACAACGAACAAGCCCTCAACGAAACGCGACACCAAAAACGC
GCCGATCCCCAGTCCGCCGATCCCCAGTCCTACTTCCAGCGTCTCAAGACCGTCGCGGACTCCATGTTCCACTAC
AAGCACGGGGAACGCGGCCGCAACACCTGGCAGCTCGGTCAGCACGGCGGCCAGGGCGAGCCCTTTTACTACCCT
GCTCGAGGGCTGGCCGAGGCGACCGACGTGTTGACTGAGGCGGGGCGAGAGGTCTTTCGGCGGAAATGGGGGCAT
AAGGATTGCGATCTTATCGATGGGGGGAAGCGTGGCTTTGATGATCAGTGGCGGGTCGAGAAGGATTGGTAA
Gene >Ophcf2|03540
ATGGCCCTCCGTGGCCGCCGATACGTCCTGCTAGCCATCCTCATCACCGCCCTGATAGCCCTCGTCCTCCTTCGA
CGAGAACCCTTCCAACGAGCCCGCGACCTCTTGGTCAATAGATACCGTCCACCACCGCGCCACATGCCAGACCCG
AACTGGACTCCGCCGCCGATCAAGAACCCCTTTCCAACGCTGTCGGGAACAGGAGCCTCACCACCCCAGATCCCC
ATCTGGAACCGACCCAAGAAGAAACTATACAAGAAATATGGCCTCGATTACGCGCCGCCGCTCCTCATCGGCTTC
ACCCGCGCCTGGCCCGTCCTCCTCCAGGCCGTCGTCTCGTACCTGACGGCCGGCTGGCCTGCCGATCAAATCTGG
ATCGTCGACAACACGGGGGCTTCACGGGCCAATGCCGCGGGCCGACTGACGCTGCAGAATCCGCTGTTCCTGGAT
CACGGGCTGCTCCGACGGCTGGGCGTGCGTGTGCTTTCGACGCCCGTGCTCATGACGTTTGCCCAGCTGCAGAAC
TATTACACCCATCTGGCTCACGTCCACGGATGGCCTTGGTACTTCTGGTCCCATATGGATGTCTTGGTGCTTTCG
TATGAGGAAGGCCTTCAGGGCGTGACGCCGGCGGCTGGGGAGACGGGGTATAAGACTGTGTATGAGCTGTGTCTC
GCCGAGCTGCAGCTTCGTCGGAAGGAGAGTCTTCGCTGGTCCAGCGTCTTCTTCTCGTACGATCATCTGACGCTG
GTCAATCGCGAGGCGTATGATGACGTCGGCGGCTGGGATGTCTTTATCCCTTACTATATGAACGACTGCGATATG
CACTCTCGCCTGATGATGCGCAACTGGAGTCAGCCTGAAGCCCGAGCCGGCATCATAACCGACGTCAGCACCGTC
CTCGACGACCTCCGAGCTCTATACCGCGATCCAGACGTCGAACCAGCCTTCACAGATCCCAACCCCCCGAAACCA
GACCCCGACCCCTCGCAAGACGACGACGACGACGACAACGAACAAGCCCTCAACGAAACGCGACACCAAAAACGC
GCCGATCCCCAGTCCGCCGATCCCCAGTCCTACTTCCAGCGTCTCAAGACCGTCGCGGACTCCATGTTCCACTAC
AAGCACGGGGAACGCGGCCGCAACACCTGGCAGCTCGGTCAGCACGGCGGCCAGGGCGAGCCCTTTTACTACCCT
GCTCGAGGGCTGGCCGAGGCGACCGACGTGTTGACTGAGGCGGGGCGAGAGGTCTTTCGGCGGAAATGGGGGCAT
AAGGATTGCGATCTTATCGATGGGGGGAAGCGTGGCTTTGATGATCAGTGGCGGGTCGAGAAGGATTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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