Protein ID | Ophcf2|03537 |
Gene name | |
Location | scaffold_03:2983155..2985037 |
Strand | + |
Gene length (bp) | 1882 |
Transcript length (bp) | 1605 |
Coding sequence length (bp) | 1605 |
Protein length (aa) | 535 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.3E-05 | 132 | 211 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2057 | 0.1168 | 0.8029 | 0.1623 | 0.0941 | 0.0381 | 0.271 | 0.2455 | 0.2696 | 0.0032 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 35 | 0.999069 |
Orthofinder run ID | 4 |
Orthogroup | 6887 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03537 MLRSCHPQPRMMMPRTEMHAAVLLAACLFSWTVAATEDNYSMFTNNTFFENLEPVNLSVYIARPLLGIMEDGTTQ NSPAYFRRRGGIGEASVDGTLNNHHTNASWGYLSSFFHGQGPWIHLDRSLSNTVHGLYAGREGYIVFDVVASPNM ITVEADQMLLAGADPSLVHTTVAALGGVQWTQIRRWTYLSYDQWQYPESFEWQTNREYNRSWERLGPSGPQPALR GPQLSLRGPPPRGQPVEELSVPYEQRARSFMDFLTRFEDELRLMFVRLVDWDYTAEPRDFPLLRLGFGEDEHPPP TAALPTPEATTSRVESLQNTVLRQLDWENLDGPISAKGPSAQPETTTPTSVAPPSPKATTPPPGNHPVKRDEACH ELYTIFEPRCDSISALHVDFSIGKAWTWGAGTNDAIGLLFGGARSTHPVTPLLKAPSGGDKVENLPVNLKSVFGS DIVPLRNITSIQLLDTPLESFWGPDWWKFGGITLTASCASNAQKLQLVDFNQVNEAIRNRVPVPYGPQVVWSRNI NVTQWRLKR* |
Coding | >Ophcf2|03537 ATGTTACGCTCCTGCCATCCGCAGCCGAGGATGATGATGCCGCGGACCGAGATGCATGCCGCCGTGCTGCTGGCC GCGTGCCTATTCTCATGGACCGTCGCCGCCACAGAGGACAATTACTCCATGTTCACTAACAATACTTTCTTTGAG AATTTGGAACCTGTAAACCTGAGCGTCTACATCGCCCGGCCCTTGCTCGGCATCATGGAGGATGGCACGACGCAG AATTCGCCAGCGTACTTCAGGCGACGGGGCGGGATAGGCGAAGCCTCGGTCGACGGCACGCTGAATAACCATCAC ACCAACGCATCATGGGGTTACCTTTCAAGCTTCTTCCACGGCCAGGGCCCCTGGATCCATCTCGACCGCTCTCTC TCCAACACCGTCCATGGTCTCTACGCGGGTCGTGAAGGGTACATCGTCTTCGACGTCGTCGCATCGCCCAACATG ATCACCGTGGAAGCCGACCAGATGCTCCTCGCGGGAGCCGACCCAAGCCTGGTCCACACCACGGTCGCCGCGCTG GGGGGCGTACAATGGACACAGATCCGGCGATGGACCTACCTAAGCTACGACCAGTGGCAATATCCCGAATCATTC GAGTGGCAGACGAACCGCGAATACAACCGCTCATGGGAGAGGCTGGGGCCGAGCGGTCCACAGCCAGCGCTCAGG GGTCCACAGCTATCGCTCAGAGGTCCCCCTCCACGAGGGCAACCGGTGGAAGAGCTATCGGTTCCGTATGAGCAG CGTGCTCGTTCCTTCATGGATTTCCTTACACGGTTTGAAGATGAGCTGCGACTCATGTTCGTACGACTGGTCGAT TGGGACTACACAGCCGAACCGCGAGACTTCCCCCTCCTCCGCTTAGGATTCGGCGAAGACGAACATCCACCACCG ACAGCAGCTCTCCCCACCCCCGAAGCCACCACCTCAAGAGTCGAATCCCTTCAAAACACGGTCCTCCGCCAACTG GACTGGGAAAACCTCGACGGCCCCATCTCTGCGAAGGGGCCCTCCGCTCAGCCCGAAACTACTACGCCCACCAGC GTCGCGCCACCCTCCCCCAAGGCGACGACGCCCCCCCCCGGGAACCACCCCGTCAAGCGCGACGAAGCCTGCCAT GAGCTCTACACCATCTTCGAGCCCAGATGCGATTCCATCTCCGCTCTACACGTCGACTTCTCCATAGGCAAAGCC TGGACCTGGGGCGCGGGCACCAACGATGCCATAGGCTTGCTCTTCGGCGGCGCCCGCAGCACACACCCCGTCACC CCCCTCCTCAAAGCCCCATCAGGAGGCGACAAAGTCGAGAACCTACCCGTCAATCTCAAATCCGTCTTCGGCTCC GACATCGTACCGCTGCGCAACATAACCTCGATACAACTCCTCGACACCCCTCTGGAAAGCTTCTGGGGTCCCGAC TGGTGGAAGTTTGGCGGAATCACCCTGACAGCAAGCTGCGCCAGCAATGCCCAGAAACTCCAACTGGTCGATTTC AACCAAGTCAACGAGGCCATTCGGAACAGGGTCCCGGTGCCGTACGGACCGCAGGTTGTGTGGTCTCGCAACATC AACGTTACGCAGTGGCGGCTGAAACGGTGA |
Transcript | >Ophcf2|03537 ATGTTACGCTCCTGCCATCCGCAGCCGAGGATGATGATGCCGCGGACCGAGATGCATGCCGCCGTGCTGCTGGCC GCGTGCCTATTCTCATGGACCGTCGCCGCCACAGAGGACAATTACTCCATGTTCACTAACAATACTTTCTTTGAG AATTTGGAACCTGTAAACCTGAGCGTCTACATCGCCCGGCCCTTGCTCGGCATCATGGAGGATGGCACGACGCAG AATTCGCCAGCGTACTTCAGGCGACGGGGCGGGATAGGCGAAGCCTCGGTCGACGGCACGCTGAATAACCATCAC ACCAACGCATCATGGGGTTACCTTTCAAGCTTCTTCCACGGCCAGGGCCCCTGGATCCATCTCGACCGCTCTCTC TCCAACACCGTCCATGGTCTCTACGCGGGTCGTGAAGGGTACATCGTCTTCGACGTCGTCGCATCGCCCAACATG ATCACCGTGGAAGCCGACCAGATGCTCCTCGCGGGAGCCGACCCAAGCCTGGTCCACACCACGGTCGCCGCGCTG GGGGGCGTACAATGGACACAGATCCGGCGATGGACCTACCTAAGCTACGACCAGTGGCAATATCCCGAATCATTC GAGTGGCAGACGAACCGCGAATACAACCGCTCATGGGAGAGGCTGGGGCCGAGCGGTCCACAGCCAGCGCTCAGG GGTCCACAGCTATCGCTCAGAGGTCCCCCTCCACGAGGGCAACCGGTGGAAGAGCTATCGGTTCCGTATGAGCAG CGTGCTCGTTCCTTCATGGATTTCCTTACACGGTTTGAAGATGAGCTGCGACTCATGTTCGTACGACTGGTCGAT TGGGACTACACAGCCGAACCGCGAGACTTCCCCCTCCTCCGCTTAGGATTCGGCGAAGACGAACATCCACCACCG ACAGCAGCTCTCCCCACCCCCGAAGCCACCACCTCAAGAGTCGAATCCCTTCAAAACACGGTCCTCCGCCAACTG GACTGGGAAAACCTCGACGGCCCCATCTCTGCGAAGGGGCCCTCCGCTCAGCCCGAAACTACTACGCCCACCAGC GTCGCGCCACCCTCCCCCAAGGCGACGACGCCCCCCCCCGGGAACCACCCCGTCAAGCGCGACGAAGCCTGCCAT GAGCTCTACACCATCTTCGAGCCCAGATGCGATTCCATCTCCGCTCTACACGTCGACTTCTCCATAGGCAAAGCC TGGACCTGGGGCGCGGGCACCAACGATGCCATAGGCTTGCTCTTCGGCGGCGCCCGCAGCACACACCCCGTCACC CCCCTCCTCAAAGCCCCATCAGGAGGCGACAAAGTCGAGAACCTACCCGTCAATCTCAAATCCGTCTTCGGCTCC GACATCGTACCGCTGCGCAACATAACCTCGATACAACTCCTCGACACCCCTCTGGAAAGCTTCTGGGGTCCCGAC TGGTGGAAGTTTGGCGGAATCACCCTGACAGCAAGCTGCGCCAGCAATGCCCAGAAACTCCAACTGGTCGATTTC AACCAAGTCAACGAGGCCATTCGGAACAGGGTCCCGGTGCCGTACGGACCGCAGGTTGTGTGGTCTCGCAACATC AACGTTACGCAGTGGCGGCTGAAACGGTGA |
Gene | >Ophcf2|03537 ATGTTACGCTCCTGGTCCTTGCCAACACGAAGTCGAGACATTTGCCAAGCTTCCATCATGTTATACGCCTTTTCG AGTCATGGGACTGGCTTCTTCACCATTCTCACCTCGTACTCATCAAGGCCCGTGGTATAAAGCCATCCGGTGAGG ACCTCTCCTCCGACTCGGCAAACTCCACACTGACAATTCCACAGCAGCCGAGGATGATGATGCCGCGGACCGAGA TGCATGCCGCCGTGCTGCTGGCCGCGTGCCTATTCTCATGGACCGTCGCCGCCACAGAGGACAATTACTCCATGT TCACTAACAATACTTTCTTTGAGAATTTGGAACCTGTAAACCTGAGCGTCTACATCGCCCGGCCCTTGCTCGGCA TCATGGAGGATGGCACGACGCAGAATTCGCCAGCGTACTTCAGGCGACGGGGCGGGATAGGCGAAGCCTCGGTCG ACGGCACGCTGAATAACCATCACACCAACGCATCATGGGGTTACCTTTCAAGCTTCTTCCACGGCCAGGGCCCCT GGATCCATCTCGACCGCTCTCTCTCCAACACCGTCCATGGTCTCTACGCGGGTCGTGAAGGGTACATCGTCTTCG ACGTCGTCGCATCGCCCAACATGATCACCGTGGAAGCCGACCAGATGCTCCTCGCGGGAGCCGACCCAAGCCTGG TCCACACCACGGTCGCCGCGCTGGGGGGCGTACAATGGACACAGATCCGGCGATGGACCTACCTAAGCTACGACC AGTGGCAATATCCCGAATCATTCGAGTGGCAGACGAACCGCGAATACAACCGCTCATGGGAGAGGCTGGGGCCGA GCGGTCCACAGCCAGCGCTCAGGGGTCCACAGCTATCGCTCAGAGGTCCCCCTCCACGAGGGCAACCGGTGGAAG AGCTATCGGTTCCGTATGAGCAGCGTGCTCGTTCCTTCATGGATTTCCTTACACGGTTTGAAGATGAGCTGCGAC TCATGTTCGTACGACTGGTCGATTGGGACTACACAGCCGAACCGCGAGACTTCCCCCTCCTCCGCTTAGGATTCG GCGAAGACGAACATCCACCACCGACAGCAGCTCTCCCCACCCCCGAAGCCACCACCTCAAGAGTCGAATCCCTTC AAAACACGGTCCTCCGCCAACTGGACTGGGAAAACCTCGACGGCCCCATGTTCATCCGCCAGGCCATGCTCGCAG GCGCAGCTCTAACCCCCCAGCTCTGCGAAGGGGCCCTCCGCTCAGCCCGAAACTACTACGCCCACCAGCGTCGCG CCACCCTCCCCCAAGGCGACGACGCCCCCCCCCGGGAACCACCCCGTCAAGCGCGACGAAGCCTGCCATGAGCTC TACACCATCTTCGAGCCCAGATGCGATTCCATCTCCGCTCTACACGTCGACTTCTCCATAGGCAAAGCCTGGACC TGGGGCGCGGGCACCAACGATGCCATAGGCTTGCTCTTCGGCGGCGCCCGCAGCACACACCCCGTCACCCCCCTC CTCAAAGCCCCATCAGGAGGCGACAAAGTCGAGAACCTACCCGTCAATCTCAAATCCGTCTTCGGCTCCGACATC GTACCGCTGCGCAACATAACCTCGATACAACTCCTCGACACCCCTCTGGAAAGCTTCTGGGGTCCCGACTGGTGG AAGTTTGGCGGTGATTTCTTCCCTTGCCCCCCTTTTCCGCTTTCCCCCCAAAGCTAACGAGATGAAAGGAATCAC CCTGACAGCAAGCTGCGCCAGCAATGCCCAGAAACTCCAACTGGTCGATTTCAACCAAGTCAACGAGGCCATTCG GAACAGGGTCCCGGTGCCGTACGGACCGCAGGTTGTGTGGTCTCGCAACATCAACGTTACGCAGTGGCGGCTGAA ACGGTGA |