Protein ID | Ophcf2|03536 |
Gene name | |
Location | scaffold_03:2981252..2982491 |
Strand | - |
Gene length (bp) | 1239 |
Transcript length (bp) | 1239 |
Coding sequence length (bp) | 1239 |
Protein length (aa) | 413 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 60 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 292 | 314 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 32.16 | 16.53 | 47.79 |
Alive | In ants, during behavior modification | 41.87 | 22.60 | 61.13 |
Dead | In ants, recently dead | 33.11 | 17.11 | 49.10 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.223332 | no |
Alive | Dead | 0.200183 | no |
Dead | Fungus | 0.917828 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03536 MGKPSLPGSDPAPPSARFNEPGSAISLHGPSSAPYRDDPAAIDDDDDDDDDDDDDDELPPLYSEHDEYHDQGPLV DPLVPPGTGPLVSPFGHDSEGAVAYYMDGRLDSDPVFLADHIRRLAVVPPRPSVRLRGTHRQRRRRAGDNSHVTG GDDVVVDFDIRIELTHLLYSDIRRQQAWRALVTAGNFEKVRRGTIFPDRAPGFGGSPGGDVERDGVPGLEQWCHR FCASPARLRCFSLQRRIVGWDWELLRRRLEGLVRATNYRGHAVVSFPIGNAQADIYSDCRPNRWRLTGWIRFIFY ASLLFLVTWPWLFLRTRRWETVAAEWYVSMPTSVPGRRQYAAGVSEERWYALWAPAIQRAMLDRRDGLLDQGDLE RARSEVAGGWLARASGRLWGLLIGHSDGGGMRFRGLD* |
Coding | >Ophcf2|03536 ATGGGTAAACCATCCCTCCCCGGATCCGATCCGGCTCCACCCTCTGCCCGCTTCAACGAGCCCGGAAGCGCCATC TCCCTGCACGGACCGTCATCGGCCCCCTACCGCGACGATCCAGCCGCCATCGACGACGACGACGACGACGACGAC GACGACGACGACGACGACGAACTCCCGCCTCTATACAGCGAACACGATGAATATCATGACCAAGGACCCCTCGTC GATCCCCTCGTCCCCCCCGGAACCGGCCCACTCGTCTCACCCTTTGGACACGACAGCGAAGGCGCAGTCGCTTAC TACATGGATGGACGTCTCGACTCCGACCCCGTCTTCCTAGCCGATCACATCCGACGTCTGGCCGTCGTCCCCCCC CGACCATCAGTCCGACTCCGCGGCACACACCGACAACGACGGCGCCGAGCCGGTGACAACAGCCACGTAACAGGC GGCGATGACGTCGTGGTAGACTTCGACATCCGCATCGAGCTGACGCACCTCCTCTACTCGGACATCCGTCGCCAG CAAGCCTGGCGCGCCCTCGTCACAGCCGGCAACTTTGAAAAGGTCCGCCGCGGCACCATCTTCCCCGATCGCGCT CCTGGCTTCGGCGGCTCTCCCGGCGGAGACGTGGAGCGGGACGGCGTCCCCGGCTTGGAGCAGTGGTGTCATCGG TTCTGTGCCAGTCCAGCTCGACTGCGATGTTTCAGCCTTCAACGTCGAATCGTAGGCTGGGATTGGGAGCTGTTG AGACGCAGGCTAGAAGGCCTGGTTCGAGCAACCAACTACCGCGGCCACGCCGTCGTCAGCTTCCCCATCGGCAAC GCTCAAGCCGACATTTACAGCGACTGCCGGCCCAACCGATGGCGTCTCACAGGCTGGATCCGCTTCATCTTCTAC GCCAGCCTGCTCTTCCTCGTCACCTGGCCGTGGCTCTTCCTCCGGACGCGCCGGTGGGAGACGGTCGCGGCAGAG TGGTACGTCAGCATGCCGACGAGCGTGCCGGGTCGACGGCAGTACGCGGCCGGGGTGAGCGAGGAGCGGTGGTAC GCGCTGTGGGCGCCCGCCATTCAGCGCGCCATGCTGGATCGCAGGGATGGTCTGCTGGACCAGGGGGACCTGGAG AGGGCGAGGAGTGAGGTTGCCGGGGGGTGGTTGGCGCGGGCGTCGGGGCGGCTATGGGGGTTGTTGATCGGTCAT TCGGATGGGGGGGGGATGAGGTTCAGGGGTTTGGACTGA |
Transcript | >Ophcf2|03536 ATGGGTAAACCATCCCTCCCCGGATCCGATCCGGCTCCACCCTCTGCCCGCTTCAACGAGCCCGGAAGCGCCATC TCCCTGCACGGACCGTCATCGGCCCCCTACCGCGACGATCCAGCCGCCATCGACGACGACGACGACGACGACGAC GACGACGACGACGACGACGAACTCCCGCCTCTATACAGCGAACACGATGAATATCATGACCAAGGACCCCTCGTC GATCCCCTCGTCCCCCCCGGAACCGGCCCACTCGTCTCACCCTTTGGACACGACAGCGAAGGCGCAGTCGCTTAC TACATGGATGGACGTCTCGACTCCGACCCCGTCTTCCTAGCCGATCACATCCGACGTCTGGCCGTCGTCCCCCCC CGACCATCAGTCCGACTCCGCGGCACACACCGACAACGACGGCGCCGAGCCGGTGACAACAGCCACGTAACAGGC GGCGATGACGTCGTGGTAGACTTCGACATCCGCATCGAGCTGACGCACCTCCTCTACTCGGACATCCGTCGCCAG CAAGCCTGGCGCGCCCTCGTCACAGCCGGCAACTTTGAAAAGGTCCGCCGCGGCACCATCTTCCCCGATCGCGCT CCTGGCTTCGGCGGCTCTCCCGGCGGAGACGTGGAGCGGGACGGCGTCCCCGGCTTGGAGCAGTGGTGTCATCGG TTCTGTGCCAGTCCAGCTCGACTGCGATGTTTCAGCCTTCAACGTCGAATCGTAGGCTGGGATTGGGAGCTGTTG AGACGCAGGCTAGAAGGCCTGGTTCGAGCAACCAACTACCGCGGCCACGCCGTCGTCAGCTTCCCCATCGGCAAC GCTCAAGCCGACATTTACAGCGACTGCCGGCCCAACCGATGGCGTCTCACAGGCTGGATCCGCTTCATCTTCTAC GCCAGCCTGCTCTTCCTCGTCACCTGGCCGTGGCTCTTCCTCCGGACGCGCCGGTGGGAGACGGTCGCGGCAGAG TGGTACGTCAGCATGCCGACGAGCGTGCCGGGTCGACGGCAGTACGCGGCCGGGGTGAGCGAGGAGCGGTGGTAC GCGCTGTGGGCGCCCGCCATTCAGCGCGCCATGCTGGATCGCAGGGATGGTCTGCTGGACCAGGGGGACCTGGAG AGGGCGAGGAGTGAGGTTGCCGGGGGGTGGTTGGCGCGGGCGTCGGGGCGGCTATGGGGGTTGTTGATCGGTCAT TCGGATGGGGGGGGGATGAGGTTCAGGGGTTTGGACTGA |
Gene | >Ophcf2|03536 ATGGGTAAACCATCCCTCCCCGGATCCGATCCGGCTCCACCCTCTGCCCGCTTCAACGAGCCCGGAAGCGCCATC TCCCTGCACGGACCGTCATCGGCCCCCTACCGCGACGATCCAGCCGCCATCGACGACGACGACGACGACGACGAC GACGACGACGACGACGACGAACTCCCGCCTCTATACAGCGAACACGATGAATATCATGACCAAGGACCCCTCGTC GATCCCCTCGTCCCCCCCGGAACCGGCCCACTCGTCTCACCCTTTGGACACGACAGCGAAGGCGCAGTCGCTTAC TACATGGATGGACGTCTCGACTCCGACCCCGTCTTCCTAGCCGATCACATCCGACGTCTGGCCGTCGTCCCCCCC CGACCATCAGTCCGACTCCGCGGCACACACCGACAACGACGGCGCCGAGCCGGTGACAACAGCCACGTAACAGGC GGCGATGACGTCGTGGTAGACTTCGACATCCGCATCGAGCTGACGCACCTCCTCTACTCGGACATCCGTCGCCAG CAAGCCTGGCGCGCCCTCGTCACAGCCGGCAACTTTGAAAAGGTCCGCCGCGGCACCATCTTCCCCGATCGCGCT CCTGGCTTCGGCGGCTCTCCCGGCGGAGACGTGGAGCGGGACGGCGTCCCCGGCTTGGAGCAGTGGTGTCATCGG TTCTGTGCCAGTCCAGCTCGACTGCGATGTTTCAGCCTTCAACGTCGAATCGTAGGCTGGGATTGGGAGCTGTTG AGACGCAGGCTAGAAGGCCTGGTTCGAGCAACCAACTACCGCGGCCACGCCGTCGTCAGCTTCCCCATCGGCAAC GCTCAAGCCGACATTTACAGCGACTGCCGGCCCAACCGATGGCGTCTCACAGGCTGGATCCGCTTCATCTTCTAC GCCAGCCTGCTCTTCCTCGTCACCTGGCCGTGGCTCTTCCTCCGGACGCGCCGGTGGGAGACGGTCGCGGCAGAG TGGTACGTCAGCATGCCGACGAGCGTGCCGGGTCGACGGCAGTACGCGGCCGGGGTGAGCGAGGAGCGGTGGTAC GCGCTGTGGGCGCCCGCCATTCAGCGCGCCATGCTGGATCGCAGGGATGGTCTGCTGGACCAGGGGGACCTGGAG AGGGCGAGGAGTGAGGTTGCCGGGGGGTGGTTGGCGCGGGCGTCGGGGCGGCTATGGGGGTTGTTGATCGGTCAT TCGGATGGGGGGGGGATGAGGTTCAGGGGTTTGGACTGA |