Protein ID | Ophcf2|03509 |
Gene name | |
Location | scaffold_03:2891017..2892493 |
Strand | + |
Gene length (bp) | 1476 |
Transcript length (bp) | 1341 |
Coding sequence length (bp) | 1341 |
Protein length (aa) | 447 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01529 | DHHC | DHHC palmitoyltransferase | 1.0E-38 | 109 | 234 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016409 | palmitoyltransferase activity | Yes |
GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016746 | acyltransferase activity | No |
GO:0016740 | transferase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 17 | 39 | 22 |
2 | 54 | 76 | 22 |
3 | 156 | 178 | 22 |
4 | 198 | 220 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03509 MPPRRWARRLERICCTLGTYVPVAFVYGMTTWAVWVVIVIGGAEPESRWRGTPSSVVGLALYLLLNWSYTTAVFT SPGSTTTDDGYGLLPTAAARPPASSLTVKSSNGQVRFCKKCQARKPDRAHHCSSCRRCILKMDHHCPWLATCIGL RNHKAFLLFLIYTTVFSLYAFALSGSWLWSEVVVESARYVDSLMPVNFIVLAVVSGIIGLVVGGFTAWHVLLACR GQTTIECLEKTRYLSPLRRMHQQQALPPTAQRLVDMHANALPGVTRPEEGESSVTMAASADGGCDDVDDDDVVEV DLEAAAPFAGRRHVSYADREREQTRRRYEDYLDEHDSDKLPNAFDLGWRRNLTHLLGPRPSLWLVPICNTTGDGW AWEAGPRWLDARDRLRRERQRQREREISAGWGAAAEGEDEEHRQRRSPSKADRVLGRDPDLYADGTQGVRE* |
Coding | >Ophcf2|03509 ATGCCGCCTCGGCGATGGGCCCGAAGGCTCGAGAGGATATGCTGCACCCTGGGGACCTACGTGCCCGTGGCCTTT GTCTACGGCATGACGACTTGGGCTGTCTGGGTTGTTATCGTCATTGGGGGCGCTGAGCCTGAGTCGCGATGGAGA GGGACGCCCTCTTCCGTCGTTGGCCTCGCCCTCTATCTCCTCCTCAACTGGTCCTATACAACGGCCGTCTTTACC AGCCCCGGCTCGACGACGACTGACGATGGCTACGGTCTTCTCCCTACCGCCGCTGCCCGTCCGCCCGCCTCCTCG CTTACGGTCAAGAGCAGCAACGGCCAGGTTCGCTTCTGCAAGAAGTGTCAGGCCCGGAAGCCCGATCGCGCCCAC CACTGCTCATCGTGTCGGCGCTGTATCCTCAAGATGGATCATCACTGTCCCTGGCTGGCGACGTGCATTGGCCTG CGAAACCACAAGGCCTTTCTGCTCTTTCTCATCTACACCACCGTCTTCAGCCTCTACGCTTTCGCCCTGAGTGGC TCGTGGCTGTGGTCCGAGGTCGTGGTGGAGTCGGCGCGTTACGTCGATTCGCTCATGCCCGTTAACTTTATTGTT CTAGCCGTCGTCAGCGGCATCATCGGTCTCGTCGTCGGTGGCTTCACCGCTTGGCACGTCCTCCTCGCCTGTCGC GGTCAGACGACCATCGAATGCCTCGAGAAGACACGCTATCTGTCGCCCCTAAGGAGGATGCACCAGCAGCAGGCC CTCCCACCTACCGCCCAGCGGCTGGTGGACATGCACGCCAACGCGCTGCCGGGTGTGACGCGGCCCGAGGAGGGC GAAAGCAGCGTGACCATGGCAGCATCAGCCGACGGCGGCTGCGACGACGTCGACGATGACGACGTCGTCGAAGTC GACCTGGAAGCCGCCGCCCCGTTTGCAGGCCGAAGACACGTCTCATACGCGGATCGCGAGCGCGAGCAGACGCGG CGCCGGTACGAAGATTACCTGGACGAGCACGACTCGGACAAGCTGCCCAACGCCTTTGACCTCGGCTGGCGACGC AACCTGACGCACCTGCTCGGCCCAAGGCCCTCCCTCTGGCTCGTGCCCATCTGCAACACCACGGGCGACGGCTGG GCCTGGGAAGCCGGTCCGCGCTGGCTCGACGCACGGGATCGCCTCCGCCGCGAGCGACAACGACAGCGAGAGCGC GAGATCAGCGCCGGCTGGGGCGCCGCGGCGGAGGGAGAAGACGAGGAGCATCGGCAGCGTCGATCACCGAGTAAA GCGGATCGTGTTCTCGGTCGGGATCCGGATCTGTACGCCGATGGGACGCAGGGGGTGCGGGAGTAG |
Transcript | >Ophcf2|03509 ATGCCGCCTCGGCGATGGGCCCGAAGGCTCGAGAGGATATGCTGCACCCTGGGGACCTACGTGCCCGTGGCCTTT GTCTACGGCATGACGACTTGGGCTGTCTGGGTTGTTATCGTCATTGGGGGCGCTGAGCCTGAGTCGCGATGGAGA GGGACGCCCTCTTCCGTCGTTGGCCTCGCCCTCTATCTCCTCCTCAACTGGTCCTATACAACGGCCGTCTTTACC AGCCCCGGCTCGACGACGACTGACGATGGCTACGGTCTTCTCCCTACCGCCGCTGCCCGTCCGCCCGCCTCCTCG CTTACGGTCAAGAGCAGCAACGGCCAGGTTCGCTTCTGCAAGAAGTGTCAGGCCCGGAAGCCCGATCGCGCCCAC CACTGCTCATCGTGTCGGCGCTGTATCCTCAAGATGGATCATCACTGTCCCTGGCTGGCGACGTGCATTGGCCTG CGAAACCACAAGGCCTTTCTGCTCTTTCTCATCTACACCACCGTCTTCAGCCTCTACGCTTTCGCCCTGAGTGGC TCGTGGCTGTGGTCCGAGGTCGTGGTGGAGTCGGCGCGTTACGTCGATTCGCTCATGCCCGTTAACTTTATTGTT CTAGCCGTCGTCAGCGGCATCATCGGTCTCGTCGTCGGTGGCTTCACCGCTTGGCACGTCCTCCTCGCCTGTCGC GGTCAGACGACCATCGAATGCCTCGAGAAGACACGCTATCTGTCGCCCCTAAGGAGGATGCACCAGCAGCAGGCC CTCCCACCTACCGCCCAGCGGCTGGTGGACATGCACGCCAACGCGCTGCCGGGTGTGACGCGGCCCGAGGAGGGC GAAAGCAGCGTGACCATGGCAGCATCAGCCGACGGCGGCTGCGACGACGTCGACGATGACGACGTCGTCGAAGTC GACCTGGAAGCCGCCGCCCCGTTTGCAGGCCGAAGACACGTCTCATACGCGGATCGCGAGCGCGAGCAGACGCGG CGCCGGTACGAAGATTACCTGGACGAGCACGACTCGGACAAGCTGCCCAACGCCTTTGACCTCGGCTGGCGACGC AACCTGACGCACCTGCTCGGCCCAAGGCCCTCCCTCTGGCTCGTGCCCATCTGCAACACCACGGGCGACGGCTGG GCCTGGGAAGCCGGTCCGCGCTGGCTCGACGCACGGGATCGCCTCCGCCGCGAGCGACAACGACAGCGAGAGCGC GAGATCAGCGCCGGCTGGGGCGCCGCGGCGGAGGGAGAAGACGAGGAGCATCGGCAGCGTCGATCACCGAGTAAA GCGGATCGTGTTCTCGGTCGGGATCCGGATCTGTACGCCGATGGGACGCAGGGGGTGCGGGAGTAG |
Gene | >Ophcf2|03509 ATGCCGCCTCGGCGATGGGCCCGAAGGCTCGAGAGGATATGCTGCACCCTGGGGACCTACGTGCCCGTGGCCTTT GTCTACGGCATGACGACTTGGGCTGTCTGGGTTGTTATCGTCATTGGGGGCGCTGAGCCTGAGTCGCGATGGAGA GGTTGCATCATCATCATGTCCTGTCGTCGTATATCCTCGCTGACAGATTTTCCGTCCAGGGACGCCCTCTTCCGT CGTTGGCCTCGCCCTCTATCTCCTCCTCAACTGGTCCTATACAACGGCCGTCTTTACCAGCCCCGGCTCGACGAC GACTGACGATGGCTACGGTCTTCTCCCTACCGCCGCTGCCCGTCCGCCCGCCTCCTCGCTTACGGTCAAGAGCAG CAACGGCCAGGTTCGCTTCTGCAAGAAGTGTCAGGCCCGGAAGCCCGATCGCGCCCACCACTGCTCATCGTGTCG GCGCTGTATCCTCAAGATGGATCATCACTGTCCCTGGCTGGCGACGTGCATTGGCCTGCGAAACCACAAGGCCTT TCTGCTCTTTCTCATCTACACCACCGTCTTCAGCCTCTACGCTTTCGCCCTGAGTGGCTCGTGGCTGTGGTCCGA GGTCGTGGTGGAGTCGGCGCGTTACGTCGATTCGCTCATGCCCGTTAACTTTATTGTTCTAGCCGTCGTCAGCGG CATCATCGGTCTCGTCGTCGGTGGCTTCACCGCTTGGCACGTCCTCCTCGCCTGTCGCGGTCAGACGACCATCGA ATGCCTCGAGAAGACACGCTATCTGTCGCCCCTAAGGAGGATGCACCAGCAGCAGGCCCTCCCACCTACCGCCCA GCGGCTGGTGGACATGCACGCCAACGCGCTGCCGGGTGTGACGCGGCCCGAGGAGGGCGAAAGCAGCGTGACCAT GGCAGCATCAGCCGACGGCGGCTGCGACGACGTCGACGATGACGACGTCGTCGAAGTCGACCTGGAAGCCGCCGC CCCGTTTGCAGGCCGAAGACACGTCTCATACGCGGATCGCGAGCGCGAGCAGACGCGGCGCCGGTACGAAGATTA CCTGGACGAGCACGACTCGGACAAGCTGCCCAACGCCTTTGACCTCGGCTGGCGACGCAACCTGACGCACCTGCT CGGCCCAAGGCCCTCCCTCTGGCTCGTGCCCATCTGCAACACCACGGGCGACGGCTGGGCCTGGGAAGCCGGTCC GCGCTGGCTCGACGCACGGGATCGCCTCCGCCGCGAGCGACAACGACAGCGAGAGCGCGAGATCAGCGCCGGCTG GGGCGCCGCGGCGGAGGGAGAAGACGAGGAGCATCGGCAGCGTCGATCACCGAGTAAAGCGGATCGTGTTCTCGG TCGGGATCCGGATCTGTACGCCGATGGGACGCAGGGGGTGCGTATGCAGCGGCTTAGTCGGAGGGGAAAGACGCT TGATGACGAGTTGCATGATTTGGATGCTGAGGGGGAGGGGAAGGGGAGTAG |