Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03495
Gene name
Locationscaffold_03:2859477..2860241
Strand-
Gene length (bp)764
Transcript length (bp)486
Coding sequence length (bp)486
Protein length (aa) 162

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00137 ATP-synt_C ATP synthase subunit C 7.4E-10 17 75
PF00137 ATP-synt_C ATP synthase subunit C 1.9E-16 96 155

GO

GO Term Description Terminal node
GO:1902600 proton transmembrane transport Yes
GO:0015078 proton transmembrane transporter activity Yes
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain Yes
GO:0008324 cation transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0009987 cellular process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0098655 cation transmembrane transport No
GO:0034220 ion transmembrane transport No
GO:0032991 protein-containing complex No
GO:0006812 cation transport No
GO:0051179 localization No
GO:0098662 inorganic cation transmembrane transport No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0098660 inorganic ion transmembrane transport No
GO:0015075 ion transmembrane transporter activity No
GO:0098796 membrane protein complex No
GO:0055085 transmembrane transport No
GO:0006811 ion transport No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 53 75 22
3 95 117 22
4 130 152 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03495
MESELAPKFAPFIGMAGIAAAMVFGSIGAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYSLVISVLI
AQDLSPPGNESYSLFSGFMHLACGTAVGMTGLAAGYCIGVVGDTGVRAYMQQSRIFVGMVLILIFGEVLGLYGLI
VALLLNSRSKG*
Coding >Ophcf2|03495
ATGGAGTCCGAGCTGGCACCCAAGTTTGCGCCCTTTATAGGCATGGCTGGCATTGCGGCCGCCATGGTCTTTGGC
TCCATCGGCGCCGCGTACGGCACTGCCAAGTCTGGTATCGGCATCGCGGGCGTCGGAACCTTTCGCCCGGACCTG
ATCATGAAGTGCCTGATCCCCGTCGTCATGTCTGGCATCATCGCCGTCTACTCGCTCGTCATCTCCGTTCTCATC
GCCCAAGACCTCTCGCCGCCGGGCAACGAAAGCTACTCCCTGTTCTCGGGCTTCATGCACCTCGCGTGTGGCACG
GCCGTCGGCATGACGGGCCTCGCGGCTGGATATTGCATCGGTGTCGTCGGTGACACGGGCGTGCGAGCCTACATG
CAGCAGTCGAGAATCTTTGTGGGAATGGTTCTCATTCTCATCTTTGGCGAGGTTCTGGGTCTCTACGGTCTCATT
GTTGCACTACTTCTCAATTCGCGGAGCAAAGGCTGA
Transcript >Ophcf2|03495
ATGGAGTCCGAGCTGGCACCCAAGTTTGCGCCCTTTATAGGCATGGCTGGCATTGCGGCCGCCATGGTCTTTGGC
TCCATCGGCGCCGCGTACGGCACTGCCAAGTCTGGTATCGGCATCGCGGGCGTCGGAACCTTTCGCCCGGACCTG
ATCATGAAGTGCCTGATCCCCGTCGTCATGTCTGGCATCATCGCCGTCTACTCGCTCGTCATCTCCGTTCTCATC
GCCCAAGACCTCTCGCCGCCGGGCAACGAAAGCTACTCCCTGTTCTCGGGCTTCATGCACCTCGCGTGTGGCACG
GCCGTCGGCATGACGGGCCTCGCGGCTGGATATTGCATCGGTGTCGTCGGTGACACGGGCGTGCGAGCCTACATG
CAGCAGTCGAGAATCTTTGTGGGAATGGTTCTCATTCTCATCTTTGGCGAGGTTCTGGGTCTCTACGGTCTCATT
GTTGCACTACTTCTCAATTCGCGGAGCAAAGGCTGA
Gene >Ophcf2|03495
ATGGAGTCCGAGCTGGCACCCAAGTTTGCGCCCTTTATAGGCATGGTGAGTCGTCTCTGGGATCGCCTGGGAGTG
CTGTGGAACTGATGCGTCGACGCAGGCTGGCATTGCGGCCGCCATGGTCTTTGGCTGTAGGCGAGCCCCCGTCTT
CCCATCTCTGGGGCGAAACGAGAAGATGCTGAACGGCTTGCAGCCATCGGCGCCGCGTACGGCACTGCCAAGTCT
GGTATCGGCATCGCGGGCGTCGGAACCTTTCGCCCGGACCTGATCATGAAGGTAGCGCCACTGTCCATATCCTCC
CGTGCCGTCGGCTCGACTAACTCGGTATCTCTCAGTGCCTGATCCCCGTCGTCATGTCTGGCATCATCGCCGTCT
ACTCGCTCGTCATCTCCGTTCTCATCGCCCAAGACCTCTCGCCGCCGGGCAACGAAAGCTACTCCCTGTTCTCGT
ACGTTCTCCCGAACGCCGCCCAACACGGGTCGCGAGTTGACTCGTTGCAGGGGCTTCATGCACCTCGCGTGTGGC
ACGGCCGTCGGCATGACGGGCCTCGCGGCTGGATATTGCATCGGTGTCGTCGGTGACACGGGCGTGCGAGCCTAC
ATGCAGCAGTCGAGAATCTTTGTGGGAATGGTTCTCATTCTCATCTTTGGCGAGGTTCTGGGTCTCTACGGGTAT
GTCTCGGACGGCGCTATCCCTGTCGATGACTTGGCTGACGATGTAGTCTCATTGTTGCACTACTTCTCAATTCGC
GGAGCAAAGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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