Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03474
Gene name
Locationscaffold_03:2802944..2804148
Strand+
Gene length (bp)1204
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07264 EI24 Etoposide-induced protein 2.4 (EI24) 5.2E-13 46 258

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 90 112 22
3 183 205 22
4 238 260 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03474
MSESTVSRKSRAVGAVGAKAQHVLQEDYGKAKTVALDALRSRAYLYPFKGIFYLVSHRSLWKPFMSCLGPYFSLY
VCVVGGMFTVAYLPQLAVLVFVNGPLAVFTTVVLILNESSALVNGLSRTWILQDALLDTFDGTLIARDATAAVRH
GREIRPGADPMQRLGKILVSPFERFSLTALIRYLVYLPLNFIPLVGTAVFLFLQGRNRGRLVHGRYFQLKKWSAS
QRSHWLEEHIGPYTAFGLVATLLEMIPLASIFFTFSNTVGAALWAADMEALDVSMADETSPTLRKRAAKAE*
Coding >Ophcf2|03474
ATGTCCGAATCCACTGTTTCGAGAAAAAGCCGCGCTGTAGGAGCTGTCGGCGCCAAGGCACAACACGTCCTTCAA
GAGGACTATGGCAAGGCCAAGACAGTCGCTCTGGACGCGCTGCGAAGTCGCGCGTATCTGTATCCCTTCAAGGGC
ATCTTCTACCTCGTCAGCCACCGAAGTCTCTGGAAACCCTTCATGTCGTGTCTTGGCCCCTACTTCAGCCTATAC
GTCTGCGTCGTGGGCGGCATGTTCACCGTAGCCTACCTCCCGCAGCTGGCAGTCCTCGTCTTCGTCAACGGACCG
CTCGCCGTCTTCACCACCGTCGTGCTCATCCTCAACGAGAGCTCGGCGTTGGTAAACGGCCTGTCGCGAACCTGG
ATCTTGCAGGATGCCCTCCTCGACACCTTTGACGGGACTCTGATTGCCAGGGACGCGACGGCCGCGGTTCGTCAC
GGTCGAGAGATTCGCCCGGGCGCGGATCCCATGCAGCGGCTCGGCAAGATTCTCGTCAGCCCCTTTGAGCGCTTC
AGCTTGACTGCCCTGATCCGCTATCTCGTTTACCTGCCACTCAACTTTATCCCTCTCGTCGGCACCGCCGTCTTT
CTCTTCCTGCAGGGTCGAAATCGTGGCCGATTGGTTCATGGCCGGTACTTCCAACTTAAGAAGTGGTCGGCCTCG
CAGCGGTCGCATTGGCTGGAGGAGCACATCGGCCCTTATACCGCCTTCGGCCTGGTCGCGACGCTGCTGGAGATG
ATTCCACTGGCTTCCATCTTCTTTACCTTTAGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCC
CTCGACGTGTCCATGGCAGACGAGACATCCCCAACGCTGAGAAAGAGAGCAGCCAAGGCCGAGTGA
Transcript >Ophcf2|03474
ATGTCCGAATCCACTGTTTCGAGAAAAAGCCGCGCTGTAGGAGCTGTCGGCGCCAAGGCACAACACGTCCTTCAA
GAGGACTATGGCAAGGCCAAGACAGTCGCTCTGGACGCGCTGCGAAGTCGCGCGTATCTGTATCCCTTCAAGGGC
ATCTTCTACCTCGTCAGCCACCGAAGTCTCTGGAAACCCTTCATGTCGTGTCTTGGCCCCTACTTCAGCCTATAC
GTCTGCGTCGTGGGCGGCATGTTCACCGTAGCCTACCTCCCGCAGCTGGCAGTCCTCGTCTTCGTCAACGGACCG
CTCGCCGTCTTCACCACCGTCGTGCTCATCCTCAACGAGAGCTCGGCGTTGGTAAACGGCCTGTCGCGAACCTGG
ATCTTGCAGGATGCCCTCCTCGACACCTTTGACGGGACTCTGATTGCCAGGGACGCGACGGCCGCGGTTCGTCAC
GGTCGAGAGATTCGCCCGGGCGCGGATCCCATGCAGCGGCTCGGCAAGATTCTCGTCAGCCCCTTTGAGCGCTTC
AGCTTGACTGCCCTGATCCGCTATCTCGTTTACCTGCCACTCAACTTTATCCCTCTCGTCGGCACCGCCGTCTTT
CTCTTCCTGCAGGGTCGAAATCGTGGCCGATTGGTTCATGGCCGGTACTTCCAACTTAAGAAGTGGTCGGCCTCG
CAGCGGTCGCATTGGCTGGAGGAGCACATCGGCCCTTATACCGCCTTCGGCCTGGTCGCGACGCTGCTGGAGATG
ATTCCACTGGCTTCCATCTTCTTTACCTTTAGCAACACCGTGGGCGCCGCGCTCTGGGCCGCTGACATGGAAGCC
CTCGACGTGTCCATGGCAGACGAGACATCCCCAACGCTGAGAAAGAGAGCAGCCAAGGCCGAGTGA
Gene >Ophcf2|03474
ATGTCCGAATCCACTGTTTCGAGAAAAAGCCGCGCTGTAGGAGCTGTCGGCGCCAAGGCACAACACGTCCTGTAT
GCGTCCTGGCCATCACTCCGTTCTCTGGACGAAGGCTGACGACGCGCAACAGTCAAGAGGACTATGGCAAGGCCA
AGACAGTCGCTCTGGACGCGCTGCGAAGTCGCGCGTATCTGTATCCCTTCAAGGTGAGCTCATACAATAGACGGA
ACTCACCGACGGAGCTGACGCGGTCTCTCTACAGGGCATCTTCTACCTCGTCAGCCACCGAAGTCTCTGGAAACC
CTTCATGTCGTGTCTTGGCCCCTACTTCAGCCTATACGTCTGCGTCGTGGGCGGCATGTTCACCGTAGCCTACCT
CCCGCAGCTGGCAGTCCTCGTCTTCGTCAACGGACCGCTCGCCGTCTTCACCACCGTCGTGCTCATCCTCAACGA
GAGCTCGGCGTTGGTAAACGGCCTGTCGCGAACCTGGATCTTGCAGGATGCCCTCCTCGACACCTTTGACGGGAC
TCTGATTGCCAGGGACGCGACGGCCGCGGTTCGTCACGGTCGAGAGATTCGCCCGGGCGCGGATCCCATGCAGCG
GCTCGGCAAGATTCTCGTCAGCCCCTTTGAGCGCTTCAGCTTGACTGCCCTGATCCGCTATCTCGTTTACCTGCC
ACTCAACTTTATCCCTCTCGTCGGCACCGCCGTCTTTCTCTTCCTGCAGGGTCGAAATCGTGGCCGATTGGTTCA
TGGCCGGGTGAGTTGAACGCCGATACATCGTCGTTTGACAGGACCGACGCTTACATCCATGCTTCCTGCAGTACT
TCCAACTTAAGAAGTGGTCGGCCTCGCAGCGGTCGCATTGGCTGGAGGAGCACATCGGCCCTTATACCGCGTAGG
TTCCAACCTCCCGGTAACGGAGATTCTGCAGACACCCGACTCGCTAACGTTGCATGGCGTCTCAGCTTCGGCCTG
GTCGCGACGCTGCTGGAGATGATTCCACTGGCTTCCATCTTCTTTACCTTTAGCAACACCGGTAAGCTGTCGTCT
TCGTTTGGGCTGTTTTTTTATCCATGTCCAGCTTTGGTTGACGACCGTACAAGTGGGCGCCGCGCTCTGGGCCGC
TGACATGGAAGCCCTCGACGTGTCCATGGCAGACGAGACATCCCCAACGCTGAGAAAGAGAGCAGCCAAGGCCGA
GTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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