Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03454
Gene name
Locationscaffold_03:2743021..2743938
Strand-
Gene length (bp)917
Transcript length (bp)675
Coding sequence length (bp)675
Protein length (aa) 225

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00319 SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain) 4.1E-21 63 110

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0046983 protein dimerization activity Yes
GO:0005515 protein binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1751 0.9553 0.0386 0.0416 0.0484 0.0003 0.0263 0.0183 0.0123 0.0005

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
SRF-type

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2603
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|561
Ophiocordyceps australis map64 (Brazil) OphauB2|5728
Ophiocordyceps camponoti-floridani Ophcf2|03454 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6604
Ophiocordyceps kimflemingae Ophio5|867
Ophiocordyceps subramaniannii Hirsu2|3940

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03454
MADITDQHDQTSPTDLDDSHAAGNGNPAVESRGIKRQRPATADDDDDDDEKGGRERRKIEIKFISDKSRRHITFS
KRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKAEGKNLIQACLNAPEPAPGNENGVDGGDQ
VESPEESAGQHIPPPGSRPGMPQNPHMPGNYMPNMPMDPQQAMAYQNYVQQRSQGYGSGMPPQAGMPPANHHQS*
Coding >Ophcf2|03454
ATGGCCGACATCACCGACCAGCACGACCAGACGTCGCCCACCGATCTTGACGATTCGCACGCCGCTGGCAATGGC
AATCCCGCCGTCGAGAGCCGAGGCATCAAACGCCAGCGTCCGGCTACGGCTGATGACGACGATGACGACGATGAA
AAGGGCGGCCGCGAGCGTCGCAAGATTGAAATCAAATTCATCAGCGACAAGTCGCGTCGCCACATCACCTTTTCC
AAGCGCAAAGCCGGCATCATGAAGAAGGCTTACGAACTCTCCGTCCTGACGGGCACTCAGGTCCTGCTACTCGTC
GTCTCCGAAACGGGCCTCGTCTACACCTTTACTACTCCAAAGCTTCAACCGCTCGTCACAAAGGCCGAGGGCAAA
AACCTCATTCAGGCTTGCTTAAACGCCCCCGAGCCGGCTCCCGGCAACGAAAACGGCGTCGACGGAGGCGACCAG
GTCGAGTCTCCCGAGGAGTCGGCCGGTCAGCACATTCCTCCGCCGGGTAGCCGTCCCGGCATGCCTCAAAATCCG
CACATGCCCGGCAATTACATGCCCAACATGCCCATGGACCCCCAACAGGCCATGGCCTATCAGAATTACGTCCAG
CAGCGCAGTCAAGGCTACGGCTCCGGCATGCCGCCTCAGGCGGGGATGCCACCCGCCAACCACCACCAGTCATGA
Transcript >Ophcf2|03454
ATGGCCGACATCACCGACCAGCACGACCAGACGTCGCCCACCGATCTTGACGATTCGCACGCCGCTGGCAATGGC
AATCCCGCCGTCGAGAGCCGAGGCATCAAACGCCAGCGTCCGGCTACGGCTGATGACGACGATGACGACGATGAA
AAGGGCGGCCGCGAGCGTCGCAAGATTGAAATCAAATTCATCAGCGACAAGTCGCGTCGCCACATCACCTTTTCC
AAGCGCAAAGCCGGCATCATGAAGAAGGCTTACGAACTCTCCGTCCTGACGGGCACTCAGGTCCTGCTACTCGTC
GTCTCCGAAACGGGCCTCGTCTACACCTTTACTACTCCAAAGCTTCAACCGCTCGTCACAAAGGCCGAGGGCAAA
AACCTCATTCAGGCTTGCTTAAACGCCCCCGAGCCGGCTCCCGGCAACGAAAACGGCGTCGACGGAGGCGACCAG
GTCGAGTCTCCCGAGGAGTCGGCCGGTCAGCACATTCCTCCGCCGGGTAGCCGTCCCGGCATGCCTCAAAATCCG
CACATGCCCGGCAATTACATGCCCAACATGCCCATGGACCCCCAACAGGCCATGGCCTATCAGAATTACGTCCAG
CAGCGCAGTCAAGGCTACGGCTCCGGCATGCCGCCTCAGGCGGGGATGCCACCCGCCAACCACCACCAGTCATGA
Gene >Ophcf2|03454
ATGGCCGACATCACCGACCAGCACGACCAGACGTCGCCCACCGATCTTGACGATTCGCACGCCGCTGGCAATGGC
AATCCCGCCGTCGAGAGCCGAGGCATCAAACGCCAGCGTCCGGCTACGGCTGATGACGACGATGACGACGATGAA
AAGGGCGGCCGCGAGCGTCGCAAGATTGAAATCAAATTCATCAGCGACAAGTCGCGTCGCCACATCACCTTTTCC
AAGCGCAAAGCCGGCATCATGAAGAAGGTCGGTGCCGTTGCCACCCGCCCACTCGACGCGAAAAGCTAATTCCCA
CCACCCCAGGCTTACGAACTCTCCGTCCTGACGGGCACTCAGGTCCTGCTACTCGTCGTCTCCGAAACGGGCCTC
GTCTACACCTTTACTACTCCAAAGCTTCAACCGCTCGTCACAAAGGCCGAGGGCAAAAACCTCATTCAGGTCTGT
CTTTCCCTTCTCGCGACGCGTCTCCCGCATCAAAGTTTTGTCGAGTAGTCGACGCGTTCTCAATCCACCCCCCTT
CTCTCTTCGGTCCCTTGATCCGGCCCCCCTTTTCCGTCGTTCCGCTGCCGACTTTCTTTCCCCCTCCTCAAATGT
CCGCTGACGTGTAATCTTCTCCCATTTAGGCTTGCTTAAACGCCCCCGAGCCGGCTCCCGGCAACGAAAACGGCG
TCGACGGAGGCGACCAGGTCGAGTCTCCCGAGGAGTCGGCCGGTCAGCACATTCCTCCGCCGGGTAGCCGTCCCG
GCATGCCTCAAAATCCGCACATGCCCGGCAATTACATGCCCAACATGCCCATGGACCCCCAACAGGCCATGGCCT
ATCAGAATTACGTCCAGCAGCGCAGTCAAGGCTACGGCTCCGGCATGCCGCCTCAGGCGGGGATGCCACCCGCCA
ACCACCACCAGTCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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