Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03432
Gene name
Locationscaffold_03:2657373..2658165
Strand+
Gene length (bp)792
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02777 Sod_Fe_C Iron/manganese superoxide dismutases, C-terminal domain 2.1E-31 101 199
PF00081 Sod_Fe_N Iron/manganese superoxide dismutases, alpha-hairpin domain 7.3E-30 6 85

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0006801 superoxide metabolic process Yes
GO:0004784 superoxide dismutase activity Yes
GO:0043169 cation binding No
GO:0016209 antioxidant activity No
GO:0016491 oxidoreductase activity No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0043167 ion binding No
GO:0008150 biological_process No
GO:0072593 reactive oxygen species metabolic process No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor No
GO:0005488 binding No
GO:0044237 cellular metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Peroxisome Peroxisomal targeting signal 0.5276 0.0771 0.0332 0.1135 0.2124 0.0607 0.335 0.1366 0.1622 0.8145

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5923
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1657
Ophiocordyceps australis map64 (Brazil) OphauB2|6223
Ophiocordyceps camponoti-floridani Ophcf2|03432 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2426
Ophiocordyceps kimflemingae Ophio5|6494

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03432
MSVTVYKLPKLGFAYNALEPSISAQIMELHHSKHHQAYIDNLNRALESQAAAIASGDLPGQMAQQAAIRFNGGGH
INHTLFWEGLTAAGSAEADAARAAPQLVAAIEGGLGGFDRFRAVFRGALLGVQGSGWGWLVREAGSGRALRVVTT
KDQDPVVEDVPIFGVDMWEHAYYLQYLNGKAAYVDNIWNVINWKTAEARFCGGLEDAFQGLKASLD*
Coding >Ophcf2|03432
ATGTCTGTTACCGTGTATAAGCTTCCCAAGCTGGGCTTCGCCTACAATGCGCTGGAGCCCAGCATCTCAGCCCAA
ATCATGGAGCTACACCACAGCAAGCACCACCAAGCCTACATCGACAACCTCAACCGCGCCCTCGAATCCCAAGCG
GCAGCCATCGCCTCGGGCGATCTCCCGGGCCAGATGGCGCAGCAGGCAGCCATCCGCTTCAACGGCGGGGGCCAC
ATCAACCACACGCTCTTCTGGGAGGGTCTGACGGCTGCTGGCTCGGCCGAGGCGGATGCTGCGCGGGCGGCGCCT
CAGCTCGTGGCTGCCATCGAGGGGGGTTTGGGGGGGTTCGACCGGTTTCGTGCTGTGTTTAGGGGGGCTTTGTTG
GGGGTGCAGGGGAGTGGGTGGGGGTGGTTGGTTCGTGAGGCTGGTTCGGGGAGGGCGTTGCGCGTCGTTACGACC
AAGGACCAGGATCCTGTTGTTGAGGACGTGCCTATCTTCGGGGTTGACATGTGGGAGCATGCTTATTATCTCCAG
TATCTCAACGGCAAGGCCGCCTACGTCGACAACATCTGGAACGTCATCAACTGGAAGACGGCCGAGGCGCGCTTC
TGCGGCGGGCTGGAGGATGCGTTCCAGGGGCTCAAGGCGTCTTTGGACTGA
Transcript >Ophcf2|03432
ATGTCTGTTACCGTGTATAAGCTTCCCAAGCTGGGCTTCGCCTACAATGCGCTGGAGCCCAGCATCTCAGCCCAA
ATCATGGAGCTACACCACAGCAAGCACCACCAAGCCTACATCGACAACCTCAACCGCGCCCTCGAATCCCAAGCG
GCAGCCATCGCCTCGGGCGATCTCCCGGGCCAGATGGCGCAGCAGGCAGCCATCCGCTTCAACGGCGGGGGCCAC
ATCAACCACACGCTCTTCTGGGAGGGTCTGACGGCTGCTGGCTCGGCCGAGGCGGATGCTGCGCGGGCGGCGCCT
CAGCTCGTGGCTGCCATCGAGGGGGGTTTGGGGGGGTTCGACCGGTTTCGTGCTGTGTTTAGGGGGGCTTTGTTG
GGGGTGCAGGGGAGTGGGTGGGGGTGGTTGGTTCGTGAGGCTGGTTCGGGGAGGGCGTTGCGCGTCGTTACGACC
AAGGACCAGGATCCTGTTGTTGAGGACGTGCCTATCTTCGGGGTTGACATGTGGGAGCATGCTTATTATCTCCAG
TATCTCAACGGCAAGGCCGCCTACGTCGACAACATCTGGAACGTCATCAACTGGAAGACGGCCGAGGCGCGCTTC
TGCGGCGGGCTGGAGGATGCGTTCCAGGGGCTCAAGGCGTCTTTGGACTGA
Gene >Ophcf2|03432
ATGTCTGTTACCGTGTATAAGCTTCCCAAGCTGGGCTTCGCCTACAATGTCCGTCCGTCCTTTTACCGTTCCCAG
TTTCGTGGCAAATCCGACAGGAGCTGACGATGCCTTCAGGCGCTGGAGCCCAGCATCTCAGCCCAAATCATGGAG
CTACACCACAGCAAGCACCACCAAGCCTACATCGACAACCTCAACCGCGCCCTCGAATCCCAAGCGGCAGCCATC
GCCTCGGGCGATCTCCCGGGCCAGATGGCGCAGCAGGCAGCCATCCGCTTCAACGGCGGGGGCCACATCAACCAC
ACGCTCTTCTGGGAGGGTCTGACGGCTGCTGGCTCGGCCGAGGCGGATGCTGCGCGGGCGGCGCCTCAGCTCGTG
GCTGCCATCGAGGGGGGTTTGGGGGGGTTCGACCGGTTTCGTGCTGTGTTTAGGGGGGCTTTGTTGGGGGTGCAG
GGGAGTGGGTGGGGGTGGTTGGTTCGTGAGGCTGGTTCGGGGAGGGCGTTGCGCGTCGTTACGACCAAGGACCAG
GATCCTGTTGTTGAGGACGTGCCTATCTTCGGGGTTGACATGTGGGAGCATGCTTATTATCTCCAGGTGAGAGAC
ATCGATGGGTGCTGTTCTGTTGGTGTGTGGTTACCATGCTGACGCGGTGCGCTTCCTCAACGACAGTATCTCAAC
GGCAAGGCCGCCTACGTCGACAACATCTGGAACGTCATCAACTGGAAGACGGCCGAGGCGCGCTTCTGCGGCGGG
CTGGAGGATGCGTTCCAGGGGCTCAAGGCGTCTTTGGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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