Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03410
Gene name
Locationscaffold_03:2601106..2601673
Strand-
Gene length (bp)567
Transcript length (bp)375
Coding sequence length (bp)375
Protein length (aa) 125

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5676 0.4224 0.1513 0.1545 0.4558 0.154 0.0631 0.0317 0.0763 0.0418

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2418
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1566
Ophiocordyceps australis map64 (Brazil) OphauB2|4788
Ophiocordyceps camponoti-floridani Ophcf2|03410 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|1275
Ophiocordyceps kimflemingae Ophio5|3881
Ophiocordyceps subramaniannii Hirsu2|3433

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03410
MAPSSRFNPSKTSQAVRTSARFSTYSMAAPSFAPTMKTSDTAHAEIRDIASGLDRMENKALSSQRVALTDEKTDR
LGKLALGAKLERALDRRMSGQDAVMRPRPKSVAISLSLNEKKPAADKAA*
Coding >Ophcf2|03410
ATGGCCCCATCATCACGATTCAATCCGTCAAAGACGTCCCAAGCGGTCCGAACCTCGGCCCGCTTCAGCACCTAC
AGCATGGCAGCCCCGTCCTTTGCGCCCACGATGAAGACGTCCGATACCGCTCACGCCGAGATACGCGACATCGCC
TCGGGCCTCGACCGCATGGAGAACAAGGCCCTCTCCTCCCAGAGAGTCGCCCTCACCGACGAAAAGACGGACAGG
CTCGGCAAGCTCGCCCTCGGCGCCAAGTTGGAACGCGCCCTCGACCGTCGCATGAGCGGTCAGGACGCCGTCATG
CGCCCGCGCCCCAAGAGCGTCGCCATCAGCCTGTCGCTCAACGAGAAGAAACCCGCGGCTGACAAGGCTGCGTAA
Transcript >Ophcf2|03410
ATGGCCCCATCATCACGATTCAATCCGTCAAAGACGTCCCAAGCGGTCCGAACCTCGGCCCGCTTCAGCACCTAC
AGCATGGCAGCCCCGTCCTTTGCGCCCACGATGAAGACGTCCGATACCGCTCACGCCGAGATACGCGACATCGCC
TCGGGCCTCGACCGCATGGAGAACAAGGCCCTCTCCTCCCAGAGAGTCGCCCTCACCGACGAAAAGACGGACAGG
CTCGGCAAGCTCGCCCTCGGCGCCAAGTTGGAACGCGCCCTCGACCGTCGCATGAGCGGTCAGGACGCCGTCATG
CGCCCGCGCCCCAAGAGCGTCGCCATCAGCCTGTCGCTCAACGAGAAGAAACCCGCGGCTGACAAGGCTGCGTAA
Gene >Ophcf2|03410
ATGGCCCCATCAGTACGTTCGTGTCATTTTTTTTTTCCCCTCCTCACATCTCCATCAAATTCTTCATCGCCTTCT
GCTCCTCTCTCACAAGTTGCCTTCCCTTGTTCGTCTCTCTGTTCTCTTCGGCCAACCATCGCACAAACAAGCAGT
CACGATTCAATCCGTCAAAGACGTCCCAAGCGGTGCGTGCGTCCCGTGCGCGAATAAAGAGTCTAAGCTGATGCC
CTCCGTCTCCAGGTCCGAACCTCGGCCCGCTTCAGCACCTACAGCATGGCAGCCCCGTCCTTTGCGCCCACGATG
AAGACGTCCGATACCGCTCACGCCGAGATACGCGACATCGCCTCGGGCCTCGACCGCATGGAGAACAAGGCCCTC
TCCTCCCAGAGAGTCGCCCTCACCGACGAAAAGACGGACAGGCTCGGCAAGCTCGCCCTCGGCGCCAAGTTGGAA
CGCGCCCTCGACCGTCGCATGAGCGGTCAGGACGCCGTCATGCGCCCGCGCCCCAAGAGCGTCGCCATCAGCCTG
TCGCTCAACGAGAAGAAACCCGCGGCTGACAAGGCTGCGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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