Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03368
Gene name
Locationscaffold_03:2498992..2499639
Strand+
Gene length (bp)647
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 3.8E-11 32 155

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.5

Transmembrane Domains

Domain # Start End Length
1 29 51 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03368
MDLENDQIPAGWVREGDFLVPWWQSRTGVIIKWVVFLVIVLLFTLYVLGGYLHARYRIKKGLPPLAYHRCLVARR
MQPPPMAGHHNGWPQQGYYGPPPPNGFAMNNMGAPPVYDPTRPPTYMGAPPPDGGSKVDPSQWRNEPTRREPEPN
GAPDYQARP*
Coding >Ophcf2|03368
ATGGATTTGGAGAATGATCAGATTCCGGCTGGGTGGGTGCGCGAGGGGGACTTTCTCGTGCCCTGGTGGCAGAGT
AGAACGGGCGTCATCATCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACGTCTTAGGCGGC
TATCTCCATGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTAGTCGCCCGACGA
ATGCAGCCTCCCCCGATGGCTGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGGTCCGCCCCCCCCCAAC
GGATTTGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACACGTCCGCCTACCTACATGGGCGCCCCC
CCGCCCGACGGCGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC
GGCGCGCCTGATTACCAGGCTCGGCCTTGA
Transcript >Ophcf2|03368
ATGGATTTGGAGAATGATCAGATTCCGGCTGGGTGGGTGCGCGAGGGGGACTTTCTCGTGCCCTGGTGGCAGAGT
AGAACGGGCGTCATCATCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACGTCTTAGGCGGC
TATCTCCATGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTAGTCGCCCGACGA
ATGCAGCCTCCCCCGATGGCTGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGGTCCGCCCCCCCCCAAC
GGATTTGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACACGTCCGCCTACCTACATGGGCGCCCCC
CCGCCCGACGGCGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC
GGCGCGCCTGATTACCAGGCTCGGCCTTGA
Gene >Ophcf2|03368
ATGGATTTGGAGAATGATCAGATTCCGGCTGGGTGGGTGCGCGAGGGGGACTTTCTCGTGCCCTGGTGGCAGAGT
AGAGTGAGTTTGCTCTGGTCGTCCTGATGGGATCGTGATGGGATCTTGGTGAGAGATGCTGGATGAAAGAGAGCC
GTTTCTGACAGTCCCGATCTGCGCAGACGGGCGTCATCATCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCT
TCACCCTCTACGTCTTAGGCGGCTATCTCCATGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACC
ACCGCGTGAGTCCCTACCATTACCTCCCTCCCTATTCCCTCCTCATGCAACCTCGCACGCTGACGGACCCAAAGT
GCCTAGTCGCCCGACGAATGCAGCCTCCCCCGATGGCTGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACG
GTCCGCCCCCCCCCAACGGATTTGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACACGTCCGCCTA
CCTACATGGGCGCCCCCCCGCCCGACGGCGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGC
GCGAGCCTGAGCCCAACGGCGCGCCTGATTACCAGGCTCGGCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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